Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 1.7e-120 436.0 223 100.0
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 2.6e-92 342.4 184 95.1
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 3.0e-64 249.2 187 74.9
Cfa010215 Carpinus fangiana HOM05D005900 ORTHO05D007306 8.9e-61 237.7 184 70.1
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 7.5e-60 234.6 184 68.5
Haze_24259 Corylus avellana HOM05D005900 ORTHO05D007306 6.4e-59 231.5 184 68.5
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 1.7e-48 196.8 187 59.4
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 5.2e-45 185.3 189 56.6
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 8.9e-45 184.5 172 59.3
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 1.6e-41 173.7 200 53.0
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 2.1e-41 173.3 180 55.6
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 3.5e-41 172.6 164 61.0
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 6.0e-41 171.8 185 54.6
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 1.0e-40 171.0 183 56.8
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 3.0e-40 169.5 175 56.0
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 3.9e-40 169.1 180 55.0
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 5.1e-40 168.7 189 52.9
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 6.6e-40 168.3 179 54.7
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 8.6e-40 167.9 188 51.6
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 8.6e-40 167.9 180 53.9
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 1.1e-39 167.5 179 53.6
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 1.1e-39 167.5 172 55.2
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 1.9e-39 166.8 186 52.2
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 2.5e-39 166.4 183 55.7
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 3.3e-39 166.0 167 56.9
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 3.3e-39 166.0 185 53.5
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 5.6e-39 165.2 172 54.7
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 7.3e-39 164.9 173 55.5
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 7.3e-39 164.9 172 54.7
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 1.6e-38 163.7 194 49.0
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 1.6e-38 163.7 214 50.5
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 6.2e-38 161.8 182 53.3
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 5.2e-37 158.7 175 52.6
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 1.2e-36 157.5 185 51.9
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 1.2e-36 157.5 182 50.0
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 1.5e-36 157.1 189 50.8
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 4.4e-36 155.6 185 50.8
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 1.3e-35 154.1 185 49.7
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 2.2e-35 153.3 189 50.3
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 3.8e-35 152.5 181 51.4
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 3.8e-35 152.5 185 49.2
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 3.8e-35 152.5 185 49.2
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 1.9e-34 150.2 185 49.7
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 1.2e-33 147.5 148 54.1
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 1.6e-33 147.1 192 48.4
Peaxi162Scf00079g01513 Petunia axillaris HOM05D005900 ORTHO05D007306 1.6e-33 147.1 202 47.0
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 2.1e-33 146.7 186 48.4
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 2.1e-33 146.7 175 51.4
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 2.7e-33 146.4 195 50.3
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 4.6e-33 145.6 179 50.3
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 7.8e-33 144.8 186 50.5
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 3.0e-32 142.9 187 48.1
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea HOM05D005900 ORTHO05D007306 3.9e-32 142.5 195 45.6
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea HOM05D005900 ORTHO05D007306 8.7e-32 141.4 194 45.4
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 8.7e-32 141.4 186 46.8
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 1.1e-31 141.0 175 53.1
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 1.9e-31 140.2 178 46.6
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 3.3e-31 139.4 176 50.6
TWI18G0365 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 5.6e-31 138.7 181 45.3
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 7.3e-31 138.3 172 47.1
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 9.6e-31 137.9 170 50.0
Gorai.002G021100 Gossypium raimondii HOM05D005900 ORTHO05D007306 1.3e-30 137.5 182 50.0
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 1.6e-30 137.1 176 46.6
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 2.1e-30 136.7 170 50.6
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 6.2e-30 135.2 180 47.2
Gohir.D01G018900 Gossypium hirsutum HOM05D005900 ORTHO05D007306 1.4e-29 134.0 182 48.9
Sp2g27740 Schrenkiella parvula HOM05D005900 ORTHO05D007306 1.8e-29 133.7 178 48.9
vmacro01013 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 2.4e-29 133.3 237 40.5
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 4.0e-29 132.5 181 48.1
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 1.2e-28 131.0 173 48.0
Glyma.13G175800 Glycine max HOM05D005900 ORTHO05D007306 2.6e-28 129.8 186 47.3
VMungo0331G1117 Vigna mungo HOM05D005900 ORTHO05D007306 2.6e-28 129.8 185 48.1
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 3.4e-28 129.4 175 45.7
Glyma.07G200400 Glycine max HOM05D005900 ORTHO05D007306 5.8e-28 128.6 186 46.8
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 1.3e-27 127.5 171 46.8
Ca_23210_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 1.7e-27 127.1 173 44.5
MD16G1142000 Malus domestica HOM05D005900 ORTHO05D007306 1.7e-27 127.1 180 46.7
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 2.9e-27 126.3 177 46.3
BraA02t09265Z Brassica rapa HOM05D005900 ORTHO05D007306 2.9e-27 126.3 177 45.8
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 2.9e-27 126.3 181 44.8
A02p43400 Brassica napus HOM05D005900 ORTHO05D007306 3.8e-27 125.9 177 45.8
ECA238G4295 Erigeron canadensis HOM05D005900 ORTHO05D007306 3.8e-27 125.9 177 47.5
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 3.8e-27 125.9 185 44.9
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 4.9e-27 125.6 185 43.8
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 6.4e-27 125.2 183 43.7
BcaB07g29751 Brassica carinata HOM05D005900 ORTHO05D007306 8.4e-27 124.8 166 47.6
AUR62025013 Chenopodium quinoa HOM05D005900 ORTHO05D007306 8.4e-27 124.8 179 43.6
MD13G1131700 Malus domestica HOM05D005900 ORTHO05D007306 8.4e-27 124.8 180 46.7
AUR62006518 Chenopodium quinoa HOM05D005900 ORTHO05D007306 1.4e-26 124.0 180 44.4
C02p63500 Brassica napus HOM05D005900 ORTHO05D007306 1.9e-26 123.6 177 45.2
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 3.2e-26 122.9 173 45.1
BolC2t12415H Brassica oleracea HOM05D005900 ORTHO05D007306 5.4e-26 122.1 178 45.5
Zm00001eb127900 Zea mays HOM05D005900 ORTHO05D007306 5.4e-26 122.1 164 46.3
EL10Ac1g01696 Beta vulgaris HOM05D005900 ORTHO05D007306 7.1e-26 121.7 181 44.2
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 7.1e-26 121.7 181 43.1
Lj6g0004130 Lotus japonicus HOM05D005900 ORTHO05D007306 1.6e-25 120.6 204 42.2
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 4.6e-25 119.0 138 48.6
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 4.6e-25 119.0 184 41.3
BolC6t39862H Brassica oleracea HOM05D005900 ORTHO05D007306 6.0e-25 118.6 138 48.6
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 6.0e-25 118.6 101 59.4
VMungo0251G3272 Vigna mungo HOM05D005900 ORTHO05D007306 6.0e-25 118.6 185 45.9
Thhalv10004934m.g Eutrema salsugineum HOM05D005900 ORTHO05D007306 8.7e-24 114.8 164 49.4
TPR.G16445 Trifolium pratense HOM05D005900 ORTHO05D007306 1.5e-23 114.0 182 42.3
Aqoxy4G02969 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 2.5e-23 113.2 181 40.3
C03p61480 Brassica napus HOM05D005900 ORTHO05D007306 7.4e-23 111.7 161 44.7
Manes.08G100300 Manihot esculenta HOM05D005900 ORTHO05D007306 7.4e-23 111.7 163 45.4
Phvul.002G231200 Phaseolus vulgaris HOM05D005900 ORTHO05D007306 9.6e-23 111.3 185 43.2
Duzib052G0736 Durio zibethinus HOM05D005900 ORTHO05D007306 4.5e-20 102.4 186 41.4
Ca_13890_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 7.6e-20 101.7 99 55.6
BcaB04g19984 Brassica carinata HOM05D005900 ORTHO05D007306 4.9e-19 99.0 150 45.3
CSS0033783 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 3.2e-18 96.3 119 52.1
ATR0582G041 Amborella trichopoda HOM05D005900 ORTHO05D007306 5.5e-18 95.5 180 37.8
AL8G42100 Arabidopsis lyrata HOM05D005900 ORTHO05D007306 3.5e-17 92.8 168 39.3
Cc04_g15860 Coffea canephora HOM05D005900 ORTHO05D007306 3.9e-16 89.4 79 54.4
AT5G64680 Arabidopsis thaliana HOM05D005900 ORTHO05D007306 5.1e-16 89.0 165 40.0
Aqoxy83s001 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 6.7e-16 88.6 136 39.7
MELO3C032361.2 Cucumis melo HOM05D005900 ORTHO05D007306 1.1e-15 87.8 116 48.3
Aqoxy4G03322 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 1.9e-15 87.0 136 39.0
Carub.0008s2548 Capsella rubella HOM05D005900 ORTHO05D007306 1.1e-13 81.3 174 38.5
Atru.chr12.1335 Acer truncatum HOM05D005900 ORTHO05D007306 4.0e-13 79.3 69 58.0
Haze_23070 Corylus avellana HOM05D005900 ORTHO05D007306 7.6e-12 75.1 135 42.2
unitig_747.g21266 Utricularia gibba HOM05D005900 ORTHO05D007306 2.9e-11 73.2 217 27.6
Aqoxy2G04193 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 4.9e-11 72.4 116 38.8
CARHR278660 Cardamine hirsuta HOM05D005900 ORTHO05D007306 6.0e-09 65.5 160 35.0
SEGI_10970 Sequoiadendron giganteum HOM05D005900 ORTHO05D007306 7.9e-09 65.1 178 33.1
BcaC01g02700 Brassica carinata HOM05D005900 ORTHO05D007306 4.3e-07 59.3 158 35.4
Nn3g20876 Nelumbo nucifera HOM05D005900 ORTHO05D007306 3.7e-06 56.2 38 57.9


User provided reference genes

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