Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G182900 Carya illinoinensis HOM05D007603 ORTHO05D009604 1.2e-115 419.9 216 100.0
Haze_13265 Corylus avellana HOM05D007603 ORTHO05D009604 4.6e-54 215.3 223 55.6
QL08p040785 Quercus lobata HOM05D007603 ORTHO05D009604 1.7e-53 213.4 223 56.1
ClCG02G002280 Citrullus lanatus HOM05D007603 ORTHO05D009604 2.0e-49 199.9 231 55.8
MELO3C018861.2 Cucumis melo HOM05D007603 ORTHO05D009604 2.6e-49 199.5 230 55.2
Thecc.02G187900 Theobroma cacao HOM05D007603 ORTHO05D009604 1.1e-47 194.1 230 53.0
Ciclev10017455m.g Citrus clementina HOM05D007603 ORTHO05D009604 1.2e-46 190.7 230 53.0
Atru.chr6.2855 Acer truncatum HOM05D007603 ORTHO05D009604 2.3e-45 186.4 227 52.0
Potri.013G072200 Populus trichocarpa HOM05D007603 ORTHO05D009604 1.1e-44 184.1 241 49.0
Manes.13G141000 Manihot esculenta HOM05D007603 ORTHO05D009604 9.6e-44 181.0 241 48.5
Gohir.A03G153900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 1.6e-43 180.3 222 50.9
TWI23G0636 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 1.6e-43 180.3 231 54.1
Sabra13G0062200 Salix brachista HOM05D007603 ORTHO05D009604 8.1e-43 177.9 240 49.2
Gohir.D02G176900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 5.2e-42 175.3 225 52.0
FAN02G2478 Fragaria x ananassa HOM05D007603 ORTHO05D009604 2.2e-40 169.9 219 50.7
Sed0026242 Sechium edule HOM05D007603 ORTHO05D009604 2.2e-40 169.9 224 51.3
Potri.013G120700 Populus trichocarpa HOM05D007603 ORTHO05D009604 1.4e-39 167.2 240 46.7
Prupe.3G128600 Prunus persica HOM05D007603 ORTHO05D009604 4.2e-39 165.6 235 48.5
Sabra13G0102000 Salix brachista HOM05D007603 ORTHO05D009604 7.1e-39 164.9 242 46.3
Sed0002279 Sechium edule HOM05D007603 ORTHO05D009604 7.1e-39 164.9 226 52.2
arahy.Tifrunner.gnm1.ann1.M59RYT Arachis hypogaea HOM05D007603 ORTHO05D009604 1.3e-37 160.6 236 51.3
arahy.Tifrunner.gnm1.ann1.76DKB4 Arachis hypogaea HOM05D007603 ORTHO05D009604 1.7e-37 160.2 236 51.3
TWI14G0603 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 5.6e-36 155.2 230 48.3
PGR042G1843 Punica granatum HOM05D007603 ORTHO05D009604 1.1e-34 151.0 244 46.3
Actinidia10989 Actinidia chinensis HOM05D007603 ORTHO05D009604 7.6e-33 144.8 202 46.0
Lj3g0007744 Lotus japonicus HOM05D007603 ORTHO05D009604 7.6e-33 144.8 225 46.7
Psat5g274200 Pisum sativum HOM05D007603 ORTHO05D009604 3.8e-32 142.5 211 47.9
Lalb_Chr14g0367241 Lupinus albus HOM05D007603 ORTHO05D009604 1.9e-31 140.2 226 45.6
CSS0037684 Camellia sinensis var. sinensis HOM05D007603 ORTHO05D009604 4.2e-31 139.0 225 44.4
Glyma.12G207700 Glycine max HOM05D007603 ORTHO05D009604 4.2e-31 139.0 226 47.8
Carub.0005s2128 Capsella rubella HOM05D007603 ORTHO05D009604 1.2e-30 137.5 224 45.1
Dinv06842 Davidia involucrata HOM05D007603 ORTHO05D009604 1.2e-30 137.5 235 46.0
Hma1.2p1_0002F.1_g002370 Hydrangea macrophylla HOM05D007603 ORTHO05D009604 1.2e-30 137.5 231 45.5
SalBow7G0820 Salvia bowleyana HOM05D007603 ORTHO05D009604 1.6e-30 137.1 219 46.1
Cpa.g.sc50.10 Carica papaya HOM05D007603 ORTHO05D009604 6.0e-30 135.2 260 41.9
Medtr2g090770 Medicago truncatula HOM05D007603 ORTHO05D009604 3.9e-29 132.5 220 46.8
Oeu016901.1 Olea europaea HOM05D007603 ORTHO05D009604 3.9e-29 132.5 247 42.9
Solyc07g150145.1 Solanum lycopersicum HOM05D007603 ORTHO05D009604 1.5e-28 130.6 239 41.4
CsaV3_7G003160 Cucumis sativus L. HOM05D007603 ORTHO05D009604 2.5e-28 129.8 173 50.3
TPR.G6485 Trifolium pratense HOM05D007603 ORTHO05D009604 2.5e-28 129.8 216 45.8
Oeu036085.1 Olea europaea HOM05D007603 ORTHO05D009604 4.3e-28 129.0 244 42.6
Phvul.005G099400 Phaseolus vulgaris HOM05D007603 ORTHO05D009604 4.3e-28 129.0 217 43.8
THA.LOC104825256 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 9.6e-28 127.9 233 42.1
Glyma.13G293400 Glycine max HOM05D007603 ORTHO05D009604 1.3e-27 127.5 223 45.7
PGSC0003DMG400009384 Solanum tuberosum HOM05D007603 ORTHO05D009604 1.3e-27 127.5 235 41.7
vmacro12353 Vaccinium macrocarpon HOM05D007603 ORTHO05D009604 2.8e-27 126.3 217 43.8
Dinv39835 Davidia involucrata HOM05D007603 ORTHO05D009604 3.6e-27 125.9 222 45.0
VMungo1080G0021 Vigna mungo HOM05D007603 ORTHO05D009604 4.8e-27 125.6 217 44.7
Aa31sc35G40 Aethionema arabicum HOM05D007603 ORTHO05D009604 6.2e-27 125.2 233 41.6
MSTRG.14321 Avicennia marina HOM05D007603 ORTHO05D009604 1.1e-26 124.4 233 42.1
FAN14G3046 Fragaria x ananassa HOM05D007603 ORTHO05D016291 2.4e-26 123.2 220 40.9
HanXRQChr08g0231781 Helianthus annuus HOM05D007603 ORTHO05D009604 2.4e-26 123.2 219 46.6
Thhalv10010720m.g Eutrema salsugineum HOM05D007603 ORTHO05D009604 6.9e-26 121.7 234 41.0
Nitab4.5_0002629g0010 Nicotiana tabacum HOM05D007603 ORTHO05D009604 2.0e-25 120.2 231 42.0
Sp5g07770 Schrenkiella parvula HOM05D007603 ORTHO05D009604 3.4e-25 119.4 242 39.7
A07p22220 Brassica napus HOM05D007603 ORTHO05D009604 5.8e-25 118.6 223 42.2
PSO541G0270 Papaver somniferum HOM05D007603 ORTHO05D009604 7.6e-25 118.2 241 39.4
BcaC08g44692 Brassica carinata HOM05D007603 ORTHO05D009604 9.9e-25 117.9 223 42.2
C06p22280 Brassica napus HOM05D007603 ORTHO05D009604 9.9e-25 117.9 223 42.2
BolC6t37414H Brassica oleracea HOM05D007603 ORTHO05D009604 9.9e-25 117.9 223 42.2
BraA07t29901Z Brassica rapa HOM05D007603 ORTHO05D009604 1.3e-24 117.5 223 41.7
Aqoxy1G02256 Aquilegia oxysepala HOM05D007603 ORTHO05D009604 2.2e-24 116.7 252 38.5
DCAR_013048 Daucus carota HOM05D007603 ORTHO05D009604 2.9e-24 116.3 225 44.0
Actinidia11119 Actinidia chinensis HOM05D007603 ORTHO05D009604 6.4e-24 115.2 215 40.9
THA.LOC104823514 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 8.4e-24 114.8 250 38.0
Lsat_1_v5_gn_8_137160 Lactuca sativa HOM05D007603 ORTHO05D009604 1.9e-23 113.6 217 41.5
CARHR164600 Cardamine hirsuta HOM05D007603 ORTHO05D009604 3.2e-23 112.8 234 38.5
BcaB02g07727 Brassica carinata HOM05D007603 ORTHO05D009604 2.7e-22 109.8 221 39.4
PSO675G7067 Papaver somniferum HOM05D007603 ORTHO05D009604 2.3e-21 106.7 241 39.0
Cc05_g07840 Coffea canephora HOM05D007603 ORTHO05D009604 3.9e-21 105.9 195 42.6
CAN.G1543.2 Capsicum annuum HOM05D007603 ORTHO05D009604 1.5e-20 104.0 169 46.2
AT3G54680 Arabidopsis thaliana HOM05D007603 ORTHO05D009604 4.3e-20 102.4 232 37.5
FAN09G3062 Fragaria x ananassa HOM05D007603 ORTHO05D009604 4.3e-20 102.4 155 46.5
CDE10G1214 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 5.6e-20 102.1 223 40.4
AL5G35760 Arabidopsis lyrata HOM05D007603 ORTHO05D009604 7.4e-20 101.7 239 38.1
BcaC07g39795 Brassica carinata HOM05D007603 ORTHO05D009604 2.1e-19 100.1 196 40.8
A09p47630 Brassica napus HOM05D007603 ORTHO05D009604 2.8e-19 99.8 196 41.3
TAR626G1090 Trochodendron aralioides HOM05D001501 ORTHO05D001329 1.1e-18 97.8 195 40.0
Nitab4.5_0006973g0020 Nicotiana tabacum HOM05D007603 ORTHO05D009604 2.4e-18 96.7 175 44.6
CDE10G0532 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 5.3e-18 95.5 222 39.2
Nn1g04268 Nelumbo nucifera HOM05D007603 ORTHO05D009604 2.0e-17 93.6 252 39.3
Hund01003 Selenicereus undatus HOM05D007603 ORTHO05D009604 4.5e-17 92.4 243 34.6
C08p29830 Brassica napus HOM05D007603 ORTHO05D009604 5.8e-17 92.0 188 39.9
Sopen07g027470 Solanum pennellii HOM05D007603 ORTHO05D009604 1.7e-16 90.5 239 34.3
BcaB01g00169 Brassica carinata HOM05D007603 ORTHO05D009604 3.5e-14 82.8 226 37.6
BolC8t50594H Brassica oleracea HOM05D007603 ORTHO05D009604 1.3e-13 80.9 188 37.8
EL10Ac9g20838 Beta vulgaris HOM05D007603 ORTHO05D009604 3.3e-12 76.3 234 37.2
TAR624G0387 Trochodendron aralioides HOM05D007603 ORTHO05D009604 4.3e-12 75.9 158 41.1
AUR62036075 Chenopodium quinoa HOM05D007603 ORTHO05D009604 6.3e-11 72.0 129 48.1
Hund07856 Selenicereus undatus HOM05D007603 ORTHO05D009604 6.3e-11 72.0 103 46.6
Rhsim06G0135700 Rhododendron simsii HOM05D007603 ORTHO05D009604 3.1e-10 69.7 116 46.6
unitig_749.g13962 Utricularia gibba HOM05D007603 ORTHO05D009604 5.3e-10 68.9 209 34.9
MBI06_g00805_MAGBIO Magnolia biondii HOM05D007603 ORTHO05D009604 1.0e-08 64.7 171 39.2
AUR62043430 Chenopodium quinoa HOM05D007603 ORTHO05D009604 9.3e-07 58.2 241 33.6
ATR0602G239 Amborella trichopoda HOM05D007603 ORTHO05D009604 2.1e-06 57.0 303 27.7


User provided reference genes

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