Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G177800 Carya illinoinensis HOM05D004801 ORTHO05D005747 8.6e-99 364.0 233 100.0
Haze_13169 Corylus avellana HOM05D004801 ORTHO05D005747 8.7e-59 231.1 239 66.5
Cfa014619 Carpinus fangiana HOM05D004801 ORTHO05D005747 1.6e-57 226.9 235 67.2
QL08p038965 Quercus lobata HOM05D004801 ORTHO05D005747 6.7e-51 204.9 231 63.6
ClCG00G003550 Citrullus lanatus HOM05D004801 ORTHO05D005747 9.3e-45 184.5 237 48.5
ClCG07G002870 Citrullus lanatus HOM05D004801 ORTHO05D005747 9.3e-45 184.5 237 48.5
MELO3C018732.2 Cucumis melo HOM05D004801 ORTHO05D005747 1.8e-43 180.3 245 48.6
CsaV3_7G004470 Cucumis sativus L. HOM05D004801 ORTHO05D005747 1.5e-42 177.2 240 47.9
Sed0013547 Sechium edule HOM05D004801 ORTHO05D005747 7.4e-42 174.9 242 47.5
Lalb_Chr24g0399901 Lupinus albus HOM05D004801 ORTHO05D005747 3.1e-40 169.5 247 44.5
EL10Ac9g20770 Beta vulgaris HOM05D004801 ORTHO05D005747 9.0e-40 167.9 197 59.9
CSS0019593 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 1.5e-39 167.2 213 48.8
Dinv23632 Davidia involucrata HOM05D004801 ORTHO05D005747 1.1e-37 161.0 208 57.7
Phvul.004G108100 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 1.1e-37 161.0 248 48.0
Thecc.02G180400 Theobroma cacao HOM05D004801 ORTHO05D005747 3.2e-37 159.5 245 49.4
Glyma.12G204600 Glycine max HOM05D004801 ORTHO05D005747 4.2e-37 159.1 236 48.7
Glyma.13G296700 Glycine max HOM05D004801 ORTHO05D005747 4.2e-37 159.1 160 60.0
Sc21g0002890 Simmondsia chinensis HOM05D004801 ORTHO05D005747 7.2e-37 158.3 235 42.1
Gorai.005G201200 Gossypium raimondii HOM05D004801 ORTHO05D005747 1.2e-36 157.5 244 42.2
Cc05_g07190 Coffea canephora HOM05D004801 ORTHO05D005747 1.6e-36 157.1 235 51.9
Actinidia11029 Actinidia chinensis HOM05D004801 ORTHO05D005747 2.1e-36 156.8 204 49.5
Ah.08g215280 Amaranthus hybridus HOM05D004801 ORTHO05D005747 2.7e-36 156.4 206 47.1
Lalb_Chr14g0366971 Lupinus albus HOM05D004801 ORTHO05D005747 2.7e-36 156.4 246 43.1
VMungo0464G1438 Vigna mungo HOM05D004801 ORTHO05D005747 2.7e-36 156.4 181 57.5
Gohir.A03G156300 Gossypium hirsutum HOM05D004801 ORTHO05D005747 4.6e-36 155.6 158 57.0
Sed0002865 Sechium edule HOM05D004801 ORTHO05D005747 4.6e-36 155.6 242 44.6
SGA_v2.0_scaffold34G13950 Striga asiatica HOM05D004801 ORTHO05D005747 4.6e-36 155.6 234 53.4
Lj3g0028176 Lotus japonicus HOM05D004801 ORTHO05D005747 7.9e-36 154.8 245 42.4
Manes.13G146300 Manihot esculenta HOM05D004801 ORTHO05D005747 7.9e-36 154.8 261 39.5
TAR626G1782 Trochodendron aralioides HOM05D004801 ORTHO05D005747 1.3e-35 154.1 167 52.1
Hma1.2p1_0002F.1_g001940 Hydrangea macrophylla HOM05D004801 ORTHO05D005747 1.8e-35 153.7 204 59.3
Glyma.12G204500 Glycine max HOM05D004801 ORTHO05D005747 3.0e-35 152.9 228 43.0
AUR62022461 Chenopodium quinoa HOM05D004801 ORTHO05D005747 3.9e-35 152.5 194 47.4
Oeu019133.1 Olea europaea HOM05D004801 ORTHO05D005747 5.1e-35 152.1 235 44.3
Atru.chr6.2990 Acer truncatum HOM05D004801 ORTHO05D005747 1.1e-34 151.0 232 50.0
MSTRG.14326 Avicennia marina HOM05D004801 ORTHO05D005747 1.5e-34 150.6 192 45.8
Rhsim06G0141800 Rhododendron simsii HOM05D004801 ORTHO05D005747 1.5e-34 150.6 170 60.6
vmacro12308 Vaccinium macrocarpon HOM05D004801 ORTHO05D005747 1.9e-34 150.2 86 79.1
arahy.Tifrunner.gnm1.ann1.G6M6JD Arachis hypogaea HOM05D004801 ORTHO05D005747 3.3e-34 149.4 261 41.0
RcHm_v2.0_Chr2g0126621 Rosa chinensis HOM05D004801 ORTHO05D005747 3.3e-34 149.4 185 56.2
arahy.Tifrunner.gnm1.ann1.KJ31KE Arachis hypogaea HOM05D004801 ORTHO05D005747 4.3e-34 149.1 261 41.0
Migut.M00296 Erythranthe guttata HOM05D004801 ORTHO05D005747 4.3e-34 149.1 235 50.2
Gohir.D02G179400 Gossypium hirsutum HOM05D004801 ORTHO05D005747 5.7e-34 148.7 228 43.9
Potri.013G130700 Populus trichocarpa HOM05D004801 ORTHO05D005747 5.7e-34 148.7 236 50.8
Duzib248G0607 Durio zibethinus HOM05D004801 ORTHO05D005747 1.7e-33 147.1 243 43.2
GSVIVG01020552001 Vitis vinifera HOM05D004801 ORTHO05D005747 1.7e-33 147.1 86 79.1
AUR62040063 Chenopodium quinoa HOM05D004801 ORTHO05D005747 2.2e-33 146.7 207 51.2
Duzib132G1264 Durio zibethinus HOM05D004801 ORTHO05D005747 8.2e-33 144.8 230 43.0
Phvul.004G108200 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 8.2e-33 144.8 176 48.9
Ciclev10016785m.g Citrus clementina HOM05D004801 ORTHO05D005747 1.1e-32 144.4 227 51.1
COL.COLO4_30200 Corchorus olitorius HOM05D004801 ORTHO05D005747 1.1e-32 144.4 93 74.2
SGA_v2.0_scaffold70G23526 Striga asiatica HOM05D004801 ORTHO05D005747 1.1e-32 144.4 233 46.4
DCAR_013013 Daucus carota HOM05D004801 ORTHO05D005747 1.4e-32 144.1 226 42.5
Dinv26411 Davidia involucrata HOM05D004801 ORTHO05D005747 2.4e-32 143.3 86 77.9
Gorai.012G128300 Gossypium raimondii HOM05D004801 ORTHO05D005747 3.1e-32 142.9 87 77.0
Sopen10g004180 Solanum pennellii HOM05D004801 ORTHO05D005747 3.1e-32 142.9 231 44.2
VMungo0464G0320 Vigna mungo HOM05D004801 ORTHO05D005747 3.1e-32 142.9 225 40.4
Sabra13G0110300 Salix brachista HOM05D004801 ORTHO05D005747 4.1e-32 142.5 174 60.3
HPP92_008364 Vanilla planifolia HOM05D004801 ORTHO05D005747 4.1e-32 142.5 196 43.4
TWI36G1772 Tripterygium wilfordii HOM05D004801 ORTHO05D005747 6.9e-32 141.7 177 62.7
Gohir.A04G103500 Gossypium hirsutum HOM05D004801 ORTHO05D005747 2.0e-31 140.2 87 75.9
MD17G1239900 Malus domestica HOM05D004801 ORTHO05D005747 2.0e-31 140.2 157 51.6
Solyc10g008320.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 2.0e-31 140.2 233 42.9
PGSC0003DMG400013144 Solanum tuberosum HOM05D004801 ORTHO05D005747 2.0e-31 140.2 232 40.9
Gohir.D04G142900 Gossypium hirsutum HOM05D004801 ORTHO05D005747 2.6e-31 139.8 90 73.3
Peaxi162Scf00059g00194 Petunia axillaris HOM05D004801 ORTHO05D005747 2.6e-31 139.8 190 49.5
FAN02G2956 Fragaria x ananassa HOM05D004801 ORTHO05D005747 7.7e-31 138.3 94 74.5
Cpa.g.sc34.170 Carica papaya HOM05D004801 ORTHO05D005747 1.0e-30 137.9 174 48.3
ECA234G0944 Erigeron canadensis HOM05D004801 ORTHO05D005747 1.0e-30 137.9 85 74.1
MSTRG.12824 Avicennia marina HOM05D004801 ORTHO05D005747 1.3e-30 137.5 192 53.1
TPR.G6396 Trifolium pratense HOM05D004801 ORTHO05D005747 1.3e-30 137.5 238 44.5
FAN09G3815 Fragaria x ananassa HOM05D004801 ORTHO05D005747 2.2e-30 136.7 73 86.3
SalBow1G6004 Salvia bowleyana HOM05D004801 ORTHO05D005747 2.2e-30 136.7 226 40.7
Nitab4.5_0000638g0250 Nicotiana tabacum HOM05D004801 ORTHO05D005747 5.0e-30 135.6 226 42.9
Lsat_1_v5_gn_8_135921 Lactuca sativa HOM05D004801 ORTHO05D005747 6.5e-30 135.2 85 72.9
Ca_01496_v3 Cicer arietinum L. HOM05D004801 ORTHO05D005747 8.5e-30 134.8 232 41.4
FvH4_6g26250 Fragaria vesca HOM05D004801 ORTHO05D005747 8.5e-30 134.8 94 72.3
HanXRQChr17g0559281 Helianthus annuus HOM05D004801 ORTHO05D005747 1.1e-29 134.4 247 44.5
unitig_46.g18595 Utricularia gibba HOM05D004801 ORTHO05D005747 1.1e-29 134.4 158 46.8
SalBow1G1046 Salvia bowleyana HOM05D004801 ORTHO05D005747 1.4e-29 134.0 226 41.2
Nitab4.5_0000585g0130 Nicotiana tabacum HOM05D004801 ORTHO05D005747 1.9e-29 133.7 79 79.7
Nitab4.5_0011784g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 1.9e-29 133.7 237 46.8
Aqoxy4G01981 Aquilegia oxysepala HOM05D004801 ORTHO05D005747 2.5e-29 133.3 81 72.8
Prupe.3G132500 Prunus persica HOM05D004801 ORTHO05D005747 2.5e-29 133.3 195 50.3
Nitab4.5_0014741g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 7.2e-29 131.7 229 43.2
BraA08t33972Z Brassica rapa HOM05D004801 ORTHO05D005747 9.4e-29 131.3 223 40.4
CAN.G578.5 Capsicum annuum HOM05D004801 ORTHO05D005747 2.7e-28 129.8 79 78.5
PGR042G3918 Punica granatum HOM05D004801 ORTHO05D005747 2.7e-28 129.8 84 75.0
Eucgr.A01822 Eucalyptus grandis HOM05D004801 ORTHO05D005747 3.6e-28 129.4 104 64.4
Thhalv10027270m.g Eutrema salsugineum HOM05D004801 ORTHO05D005747 3.6e-28 129.4 225 39.6
SHI10398 Sapria himalayana HOM05D004801 ORTHO05D005747 4.7e-28 129.0 161 47.2
BolC8t48753H Brassica oleracea HOM05D004801 ORTHO05D005747 6.1e-28 128.6 223 38.6
BcaC07g38324 Brassica carinata HOM05D004801 ORTHO05D005747 2.3e-27 126.7 223 39.0
C08p10790 Brassica napus HOM05D004801 ORTHO05D005747 2.3e-27 126.7 223 39.0
A08p20130 Brassica napus HOM05D004801 ORTHO05D005747 3.0e-27 126.3 225 40.0
C01p24790 Brassica napus HOM05D004801 ORTHO05D005747 3.9e-27 125.9 166 50.0
BolC1t02426H Brassica oleracea HOM05D004801 ORTHO05D005747 3.9e-27 125.9 166 50.0
Medtr2g090385 Medicago truncatula HOM05D004801 ORTHO05D005747 5.1e-27 125.6 160 50.6
Sp7g26270 Schrenkiella parvula HOM05D004801 ORTHO05D005747 6.7e-27 125.2 225 38.7
BcaC09g50492 Brassica carinata HOM05D004801 ORTHO05D005747 8.8e-27 124.8 166 48.8
Glyma.13G296800 Glycine max HOM05D004801 ORTHO05D005747 8.8e-27 124.8 107 58.9
BcaB03g12566 Brassica carinata HOM05D004801 ORTHO05D005747 1.1e-26 124.4 227 38.8
unitig_37.g12306 Utricularia gibba HOM05D004801 ORTHO05D005747 2.0e-26 123.6 160 43.1
BraA01t01904Z Brassica rapa HOM05D004801 ORTHO05D005747 2.6e-26 123.2 152 49.3
CARHR236030 Cardamine hirsuta HOM05D004801 ORTHO05D005747 3.3e-26 122.9 152 47.4
Sopen07g027930 Solanum pennellii HOM05D004801 ORTHO05D005747 3.3e-26 122.9 194 43.8
MBI18_g28947_MAGBIO Magnolia biondii HOM05D004801 ORTHO05D005747 4.4e-26 122.5 74 75.7
PGSC0003DMG400018341 Solanum tuberosum HOM05D004801 ORTHO05D005747 9.7e-26 121.3 112 59.8
AT4G28310 Arabidopsis thaliana HOM05D004801 ORTHO05D005747 1.3e-25 120.9 170 44.1
CSS0042810 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 1.7e-25 120.6 192 42.2
Aa31LG2G22170 Aethionema arabicum HOM05D004801 ORTHO05D005747 2.2e-25 120.2 162 43.8
Psat5g270840 Pisum sativum HOM05D004801 ORTHO05D005747 2.8e-25 119.8 163 48.5
THA.LOC104824700 Tarenaya hassleriana HOM05D004801 ORTHO05D005747 3.7e-25 119.4 183 41.0
BcaNung01577 Brassica carinata HOM05D004801 ORTHO05D005747 4.8e-25 119.0 156 42.3
Solyc07g053950.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 1.1e-24 117.9 191 44.0
Lsat_1_v5_gn_8_135941 Lactuca sativa HOM05D004801 ORTHO05D005747 1.4e-24 117.5 68 77.9
PSO357G0555 Papaver somniferum HOM05D004801 ORTHO05D005747 2.4e-24 116.7 119 52.1
Aa31LG10G480 Aethionema arabicum HOM05D004801 ORTHO05D005747 4.1e-24 115.9 152 45.4
PSO170G5688 Papaver somniferum HOM05D004801 ORTHO05D005747 5.3e-24 115.5 109 56.0
Peaxi162Scf00132g00008 Petunia axillaris HOM05D004801 ORTHO05D005747 5.3e-24 115.5 78 71.8
SEGI_29524 Sequoiadendron giganteum HOM05D004801 ORTHO05D005747 9.1e-24 114.8 112 52.7
Psat5g272360 Pisum sativum HOM05D004801 ORTHO05D005747 1.5e-23 114.0 87 67.8
Mapoly0078s0017 Marchantia polymorpha HOM05D004801 ORTHO05D005747 2.0e-23 113.6 101 54.5
AL7G24290 Arabidopsis lyrata HOM05D004801 ORTHO05D005747 3.4e-23 112.8 224 36.2
Lj1P721T18 Lonicera japonica HOM05D004801 ORTHO05D005747 1.0e-22 111.3 65 80.0
Os06g0115700 Oryza sativa ssp. japonica HOM05D004801 ORTHO05D005747 1.3e-22 110.9 88 60.2
BcaC06g32627 Brassica carinata HOM05D004801 ORTHO05D005747 1.7e-22 110.5 220 36.4
BcaC06g32628 Brassica carinata HOM05D004801 ORTHO05D005747 1.7e-22 110.5 220 36.4
ATR0124G030 Amborella trichopoda HOM05D004801 ORTHO05D005747 2.9e-22 109.8 77 64.9
Carub.0007s1244 Capsella rubella HOM05D004801 ORTHO05D005747 3.8e-22 109.4 168 41.7
Zm00001eb269130 Zea mays HOM05D004801 ORTHO05D005747 1.9e-21 107.1 74 67.6
Pp3c17_13330 Physcomitrium patens HOM05D004801 ORTHO05D005747 2.6e-18 96.7 112 48.2
A03p58010 Brassica napus HOM05D004801 ORTHO05D005747 1.7e-17 94.0 175 34.9
C07p56130 Brassica napus HOM05D004801 ORTHO05D005747 1.7e-17 94.0 161 37.3
BraA03t14864Z Brassica rapa HOM05D004801 ORTHO05D005747 1.7e-17 94.0 175 34.9
Pp3c14_12710 Physcomitrium patens HOM05D004801 ORTHO05D005747 2.2e-17 93.6 77 57.1
BolC7t46088H Brassica oleracea HOM05D004801 ORTHO05D005747 6.3e-17 92.0 162 35.8
AagrBONN_evm.TU.Sc2ySwM_344.3370 Anthoceros agrestis HOM05D004801 ORTHO05D005747 1.6e-15 87.4 80 55.0
SalBow7G4382 Salvia bowleyana HOM05D004801 ORTHO05D005747 7.7e-15 85.1 192 38.5
BcaNung01357 Brassica carinata HOM05D004801 ORTHO05D005747 3.1e-08 63.2 188 28.2


User provided reference genes

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