Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G176600 Carya illinoinensis HOM05D005953 ORTHO05D004056 3.4e-22 107.8 71 100.0
Cfa014612 Carpinus fangiana HOM05D005953 ORTHO05D004056 6.8e-15 83.6 73 84.9
CiPaw.04G125700 Carya illinoinensis HOM05D005953 ORTHO05D004056 9.9e-14 79.7 74 81.1
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 1.2e-11 72.8 73 60.3
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 1.2e-11 72.8 73 60.3
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 1.7e-10 68.9 71 52.1
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 3.0e-10 68.2 71 52.1
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 3.0e-10 68.2 71 52.1
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 2.5e-09 65.1 75 52.0
MD17G1240800 Malus domestica HOM05D005953 ORTHO05D004056 3.3e-09 64.7 77 67.5
Prupe.3G137400 Prunus persica HOM05D005953 ORTHO05D004056 3.3e-09 64.7 83 57.8
Potri.019G100601 Populus trichocarpa HOM05D005953 ORTHO05D004056 5.6e-09 63.9 71 52.1
Potri.019G111501 Populus trichocarpa HOM05D005953 ORTHO05D004056 1.2e-08 62.8 71 62.0
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 1.6e-08 62.4 76 64.5
Sed0013976 Sechium edule HOM05D005953 ORTHO05D004056 2.1e-08 62.0 72 48.6
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 2.8e-08 61.6 71 50.7
MD09G1247900 Malus domestica HOM05D005953 ORTHO05D004056 4.7e-08 60.8 81 66.7
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 6.2e-08 60.5 78 50.0
ECA246G2973 Erigeron canadensis HOM05D005953 ORTHO05D004056 8.1e-08 60.1 74 48.6
Lsat_1_v5_gn_8_134201 Lactuca sativa HOM05D005953 ORTHO05D004056 8.1e-08 60.1 71 47.9
Manes.13G147000 Manihot esculenta HOM05D005953 ORTHO05D004056 1.1e-07 59.7 77 68.8
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 1.1e-07 59.7 79 46.8
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 1.4e-07 59.3 71 53.5
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 1.8e-07 58.9 76 51.3
ClCG02G017620 Citrullus lanatus HOM05D005953 ORTHO05D004056 1.8e-07 58.9 73 57.5
Lsat_1_v5_gn_3_37261 Lactuca sativa HOM05D005953 ORTHO05D004056 1.8e-07 58.9 75 65.3
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 2.4e-07 58.5 73 47.9
TWI36G1201 Tripterygium wilfordii HOM05D005953 ORTHO05D004056 2.4e-07 58.5 71 74.6
Nitab4.5_0000512g0060 Nicotiana tabacum HOM05D005953 ORTHO05D004056 3.1e-07 58.2 76 57.9
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 3.1e-07 58.2 78 46.2
Dinv23644 Davidia involucrata HOM05D005953 ORTHO05D004056 4.0e-07 57.8 79 63.3
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 4.0e-07 57.8 72 48.6
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 4.0e-07 57.8 75 49.3
CARHR236000 Cardamine hirsuta HOM05D005953 ORTHO05D004056 5.2e-07 57.4 77 64.9
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 6.8e-07 57.0 34 73.5
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 8.9e-07 56.6 72 50.0
Phvul.004G108400 Phaseolus vulgaris HOM05D025024 ORTHO05D004056 8.9e-07 56.6 40 65.0
PGSC0003DMG400018306 Solanum tuberosum HOM05D005953 ORTHO05D004056 8.9e-07 56.6 76 47.4
MELO3C018738.2 Cucumis melo HOM05D005953 ORTHO05D004056 1.2e-06 56.2 81 48.1
Peaxi162Scf00132g00229 Petunia axillaris HOM05D005953 ORTHO05D004056 1.2e-06 56.2 74 51.4
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 1.2e-06 56.2 79 48.1
CsaV3_7G004410 Cucumis sativus L. HOM05D005953 ORTHO05D004056 1.5e-06 55.8 80 46.2
Oeu045817.1 Olea europaea HOM05D005953 ORTHO05D004056 1.5e-06 55.8 75 48.0
ClCG07G002930 Citrullus lanatus HOM05D005953 ORTHO05D004056 2.0e-06 55.5 80 46.2
HanXRQChr17g0556381 Helianthus annuus HOM05D005953 ORTHO05D004056 2.0e-06 55.5 71 47.9
Nitab4.5_0002169g0120 Nicotiana tabacum HOM05D005953 ORTHO05D004056 2.0e-06 55.5 76 55.3
Psat0s741g0120 Pisum sativum HOM05D005953 ORTHO05D004056 2.0e-06 55.5 71 63.4
Sed0010329 Sechium edule HOM05D005953 ORTHO05D004056 2.0e-06 55.5 79 67.1
BcaB03g12563 Brassica carinata HOM05D005953 ORTHO05D004056 3.4e-06 54.7 81 46.9
BcaB03g12564 Brassica carinata HOM05D005953 ORTHO05D004056 3.4e-06 54.7 81 46.9
DCAR_013006 Daucus carota HOM05D005953 ORTHO05D004056 3.4e-06 54.7 41 65.9
AT4G28290 Arabidopsis thaliana HOM05D005953 ORTHO05D004056 4.4e-06 54.3 81 50.6
Lalb_Chr03g0029431 Lupinus albus HOM05D005953 ORTHO05D004056 5.8e-06 53.9 71 45.1
Actinidia09855 Actinidia chinensis HOM05D005953 ORTHO05D004056 9.9e-06 53.1 72 44.4
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 9.9e-06 53.1 77 42.9
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 9.9e-06 53.1 76 46.1


User provided reference genes

Program Settings