Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G171700 Carya illinoinensis HOM05D004441 ORTHO05D003109 1.4e-126 456.4 263 100.0
Haze_13109 Corylus avellana HOM05D010652 ORTHO05D003109 6.6e-63 245.0 271 59.0
Cfa014564 Carpinus fangiana HOM05D010652 ORTHO05D003109 2.3e-52 209.9 278 55.8
QL08p037640 Quercus lobata HOM05D010652 ORTHO05D003109 3.5e-40 169.5 309 47.6
TAR629G3100 Trochodendron aralioides HOM05D004441 ORTHO05D003109 6.4e-18 95.5 312 36.2
arahy.Tifrunner.gnm1.ann1.7X1CID Arachis hypogaea HOM05D010177 ORTHO05D003109 1.9e-17 94.0 325 34.2
CANSAT64G2194 Cannabis sativa HOM05D010652 ORTHO05D003109 4.2e-17 92.8 314 36.9
Lj3g0011122 Lotus japonicus HOM05D010177 ORTHO05D003109 4.2e-17 92.8 322 32.6
Manes.13G149800 Manihot esculenta HOM05D010652 ORTHO05D003109 5.4e-17 92.4 287 35.9
Psat7g199680 Pisum sativum HOM05D010177 ORTHO05D003109 1.2e-16 91.3 319 31.3
Sed0005410 Sechium edule HOM05D002331 ORTHO05D002624 1.8e-15 87.4 276 33.0
Lalb_Chr19g0135401 Lupinus albus HOM05D010177 ORTHO05D003109 3.9e-15 86.3 304 34.2
Lj1A733T64 Lonicera japonica HOM05D009304 ORTHO05D003109 6.7e-15 85.5 310 32.6
Medtr2g012750 Medicago truncatula HOM05D004441 ORTHO05D003109 6.7e-15 85.5 280 35.7
Prupe.4G040000 Prunus persica HOM05D004441 ORTHO05D003109 8.7e-15 85.1 326 32.8
Sed0017971 Sechium edule HOM05D002331 ORTHO05D002624 2.5e-14 83.6 270 33.7
Duzib160G0195 Durio zibethinus HOM05D004441 ORTHO05D003109 1.6e-13 80.9 315 32.4
Duzib192G0975 Durio zibethinus HOM05D004441 ORTHO05D003109 1.6e-13 80.9 318 32.7
Hma1.2p1_0191F.1_g083410 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 1.6e-13 80.9 282 32.6
Hma1.2p1_2209F.1_g317155 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 1.6e-13 80.9 282 32.6
arahy.Tifrunner.gnm1.ann1.48X98F Arachis hypogaea HOM05D010177 ORTHO05D003109 3.7e-13 79.7 294 33.7
FvH4_3g04520 Fragaria vesca HOM05D004441 ORTHO05D003109 4.8e-13 79.3 307 32.9
Psat1g207120 Pisum sativum HOM05D004441 ORTHO05D003109 4.8e-13 79.3 278 34.5
ClCG02G001220 Citrullus lanatus HOM05D032711 ORTHO05D003109 1.1e-12 78.2 254 34.3
CsaV3_7G004220 Cucumis sativus L. HOM05D032711 ORTHO05D003109 1.1e-12 78.2 273 33.7
Sabra05G0071200 Salix brachista HOM05D010652 ORTHO05D003109 1.4e-12 77.8 276 35.1
Manes.12G087900 Manihot esculenta HOM05D010652 ORTHO05D003109 3.1e-12 76.6 289 34.6
Gohir.D06G129200 Gossypium hirsutum HOM05D004441 ORTHO05D003109 5.3e-12 75.9 300 31.3
Gorai.010G150800 Gossypium raimondii HOM05D004441 ORTHO05D003109 5.3e-12 75.9 300 31.3
COL.COLO4_31538 Corchorus olitorius HOM05D004441 ORTHO05D003109 6.9e-12 75.5 320 30.0
FAN21G2327 Fragaria x ananassa HOM05D004441 ORTHO05D003109 6.9e-12 75.5 305 32.1
Ca_20682_v3 Cicer arietinum L. HOM05D010177 ORTHO05D003109 9.0e-12 75.1 305 28.5
Cc00_g11510 Coffea canephora HOM05D004441 ORTHO05D003109 9.0e-12 75.1 300 33.3
CSS0013822 Camellia sinensis var. sinensis HOM05D009304 ORTHO05D003109 1.2e-11 74.7 300 31.7
Cpa.g.sc34.119 Carica papaya HOM05D004441 ORTHO05D003109 1.2e-11 74.7 317 35.6
Sabra11G0031800 Salix brachista HOM05D004441 ORTHO05D003109 1.2e-11 74.7 331 32.9
Thecc.06G194800 Theobroma cacao HOM05D004441 ORTHO05D003109 1.2e-11 74.7 308 31.2
Dinv40519 Davidia involucrata HOM05D004441 ORTHO05D003109 1.5e-11 74.3 254 38.6
Gohir.A06G124300 Gossypium hirsutum HOM05D004441 ORTHO05D003109 1.5e-11 74.3 289 30.1
Glyma.13G299800 Glycine max HOM05D010177 ORTHO05D003109 2.0e-11 73.9 267 35.2
Manes.17G041200 Manihot esculenta HOM05D004441 ORTHO05D003109 2.6e-11 73.6 320 33.8
FAN16G1227 Fragaria x ananassa HOM05D004441 ORTHO05D003109 3.4e-11 73.2 303 31.7
Nn1g06687 Nelumbo nucifera HOM05D004441 ORTHO05D003109 4.5e-11 72.8 285 31.6
CSS0028025 Camellia sinensis var. sinensis HOM05D009304 ORTHO05D003109 5.8e-11 72.4 300 31.3
FAN11G1619 Fragaria x ananassa HOM05D004441 ORTHO05D003109 5.8e-11 72.4 302 30.8
Lalb_Chr22g0356441 Lupinus albus HOM05D010177 ORTHO05D003109 5.8e-11 72.4 284 31.3
Oeu029188.1 Olea europaea HOM05D004441 ORTHO05D003109 7.6e-11 72.0 295 29.8
FAN25G3261 Fragaria x ananassa HOM05D004441 ORTHO05D003109 9.9e-11 71.6 307 31.3
Gohir.A05G163400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 9.9e-11 71.6 321 29.9
Ca_00297_v3 Cicer arietinum L. HOM05D004441 ORTHO05D003109 1.3e-10 71.2 281 32.7
TPR.G36719 Trifolium pratense HOM05D004441 ORTHO05D003109 1.3e-10 71.2 294 34.0
Lj6g0023239 Lotus japonicus HOM05D004441 ORTHO05D003109 1.7e-10 70.9 248 34.3
FvH4_6g44980 Fragaria vesca HOM05D010652 ORTHO05D003109 2.9e-10 70.1 328 29.9
CiPaw.09G160900 Carya illinoinensis HOM05D004441 ORTHO05D003109 3.8e-10 69.7 297 34.3
Phvul.006G189700 Phaseolus vulgaris HOM05D004441 ORTHO05D003109 4.9e-10 69.3 276 31.5
SalBow8G3623 Salvia bowleyana HOM05D004441 ORTHO05D003109 4.9e-10 69.3 281 32.7
SalBow8G4382 Salvia bowleyana HOM05D004441 ORTHO05D003109 4.9e-10 69.3 281 32.7
Gohir.D05G166400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 6.4e-10 68.9 315 29.8
Rhsim13G0175700 Rhododendron simsii HOM05D004441 ORTHO05D003109 8.4e-10 68.6 288 31.6
Glyma.12G108500 Glycine max HOM05D010177 ORTHO05D003109 1.1e-09 68.2 305 33.1
VMungo1080G0072 Vigna mungo HOM05D010177 ORTHO05D003109 1.1e-09 68.2 278 30.6
Glyma.13G244100 Glycine max HOM05D004441 ORTHO05D003109 1.4e-09 67.8 278 30.6
Gorai.009G171500 Gossypium raimondii HOM05D004441 ORTHO05D003109 1.9e-09 67.4 310 30.0
Nitab4.5_0003018g0090 Nicotiana tabacum HOM05D009304 ORTHO05D003109 2.4e-09 67.0 311 29.9
Lj1A1210T53 Lonicera japonica HOM05D004441 ORTHO05D003109 4.2e-09 66.2 292 30.1
RcHm_v2.0_Chr5g0007441 Rosa chinensis HOM05D004441 ORTHO05D003109 5.5e-09 65.9 337 30.3
ClCG00G003130 Citrullus lanatus HOM05D004441 ORTHO05D003109 9.3e-09 65.1 297 30.3
ClCG01G022730 Citrullus lanatus HOM05D004441 ORTHO05D003109 9.3e-09 65.1 297 30.3
TAR627G0319 Trochodendron aralioides HOM05D004441 ORTHO05D003109 9.3e-09 65.1 247 29.6
arahy.Tifrunner.gnm1.ann1.KXRU9A Arachis hypogaea HOM05D004441 ORTHO05D003109 2.1e-08 63.9 315 32.1
Glyma.15G069600 Glycine max HOM05D004441 ORTHO05D003109 2.1e-08 63.9 278 32.7
Actinidia11074 Actinidia chinensis HOM05D002331 ORTHO05D003109 2.7e-08 63.5 232 31.9
PGR042G0321 Punica granatum HOM05D004441 ORTHO05D003109 2.7e-08 63.5 286 32.9
Glyma.U031310 Glycine max HOM05D010177 ORTHO05D003109 3.5e-08 63.2 254 32.7
Lj3g0005406 Lotus japonicus HOM05D010177 ORTHO05D003109 3.5e-08 63.2 294 34.7
Lalb_Chr14g0366711 Lupinus albus HOM05D010177 ORTHO05D003109 3.5e-08 63.2 273 30.8
MD10G1300500 Malus domestica HOM05D004441 ORTHO05D003109 3.5e-08 63.2 327 28.7
Peaxi162Scf00007g00287 Petunia axillaris HOM05D009304 ORTHO05D003109 3.5e-08 63.2 247 32.0
Potri.011G045700 Populus trichocarpa HOM05D004441 ORTHO05D003109 3.5e-08 63.2 329 31.0
TWI63G0258 Tripterygium wilfordii HOM05D004441 ORTHO05D003109 3.5e-08 63.2 317 30.3
DCAR_004123 Daucus carota HOM05D004441 ORTHO05D003109 4.6e-08 62.8 268 32.1
Lsat_1_v5_gn_4_70241 Lactuca sativa HOM05D009304 ORTHO05D003109 4.6e-08 62.8 301 30.6
VMungo0540G1643 Vigna mungo HOM05D004441 ORTHO05D003109 4.6e-08 62.8 273 32.2
Solyc07g054560.1 Solanum lycopersicum HOM05D009304 ORTHO05D003109 6.0e-08 62.4 313 27.8
Ca_01527_v3 Cicer arietinum L. HOM05D010177 ORTHO05D003109 7.9e-08 62.0 279 32.6
Dinv23691 Davidia involucrata HOM05D009304 ORTHO05D003109 7.9e-08 62.0 239 31.4
FAN09G1981 Fragaria x ananassa HOM05D010652 ORTHO05D003109 7.9e-08 62.0 328 31.4
FAN14G1127 Fragaria x ananassa HOM05D010652 ORTHO05D003109 1.0e-07 61.6 328 28.7
Lalb_Chr15g0089961 Lupinus albus HOM05D004441 ORTHO05D003109 1.0e-07 61.6 285 29.5
Phvul.005G106600 Phaseolus vulgaris HOM05D010177 ORTHO05D003109 1.0e-07 61.6 274 32.5
Potri.005G086300 Populus trichocarpa HOM05D010652 ORTHO05D003109 1.0e-07 61.6 227 37.0
Sopen07g028460 Solanum pennellii HOM05D009304 ORTHO05D003109 1.0e-07 61.6 314 27.4
CsaV3_6G049880 Cucumis sativus L. HOM05D004441 ORTHO05D003109 1.3e-07 61.2 296 30.1
Nitab4.5_0002370g0010 Nicotiana tabacum HOM05D009304 ORTHO05D003109 1.3e-07 61.2 265 30.2
Carub.0002s0400 Capsella rubella HOM05D004441 ORTHO05D003109 1.8e-07 60.8 242 30.6
MELO3C007307.2 Cucumis melo HOM05D004441 ORTHO05D003109 1.8e-07 60.8 296 30.1
THA.LOC104809557 Tarenaya hassleriana HOM05D004441 ORTHO05D003109 2.3e-07 60.5 308 30.5
Eucgr.A01789 Eucalyptus grandis HOM05D004441 ORTHO05D003109 3.9e-07 59.7 307 30.3
DCAR_009737 Daucus carota HOM05D009304 ORTHO05D003109 5.1e-07 59.3 238 30.7
Dinv39787 Davidia involucrata HOM05D004441 ORTHO05D003109 5.1e-07 59.3 276 31.2
Nitab4.5_0001820g0050 Nicotiana tabacum HOM05D004441 ORTHO05D003109 8.7e-07 58.5 283 31.1
Nitab4.5_0007319g0010 Nicotiana tabacum HOM05D004441 ORTHO05D003109 8.7e-07 58.5 255 33.3
PGSC0003DMG400018324 Solanum tuberosum HOM05D009304 ORTHO05D003109 8.7e-07 58.5 314 27.4
Medtr4g046123 Medicago truncatula HOM05D010177 ORTHO05D003109 1.1e-06 58.2 363 31.1
PSO675G8062 Papaver somniferum HOM05D004441 ORTHO05D003109 1.1e-06 58.2 342 30.1
Potri.004G037100 Populus trichocarpa HOM05D004441 ORTHO05D003109 1.5e-06 57.8 327 30.9
ClCG03G005640 Citrullus lanatus HOM05D004441 ORTHO05D003109 1.9e-06 57.4 302 29.8
Cc05_g06660 Coffea canephora HOM05D009304 ORTHO05D003109 1.9e-06 57.4 319 29.8
Sabra04G0022600 Salix brachista HOM05D004441 ORTHO05D003109 1.9e-06 57.4 324 31.5
BcaC02g10584 Brassica carinata HOM05D004441 ORTHO05D003109 2.5e-06 57.0 233 32.6
C04p27200 Brassica napus HOM05D004441 ORTHO05D003109 2.5e-06 57.0 233 32.6
BolC4t24251H Brassica oleracea HOM05D004441 ORTHO05D003109 2.5e-06 57.0 233 32.6
Aa31LG2G9430 Aethionema arabicum HOM05D004441 ORTHO05D003109 3.3e-06 56.6 228 32.0
Ciclev10015894m.g Citrus clementina HOM05D004441 ORTHO05D003109 3.3e-06 56.6 335 28.1
TWI38G0459 Tripterygium wilfordii HOM05D004441 ORTHO05D003109 3.3e-06 56.6 314 27.7
Oeu026007.1 Olea europaea HOM05D004441 ORTHO05D003109 4.3e-06 56.2 311 29.9
CDE04G0293 Ceratophyllum demersum HOM05D004919 ORTHO05D005994 7.4e-06 55.5 249 30.5
Lsat_1_v5_gn_4_55461 Lactuca sativa HOM05D004441 ORTHO05D003109 9.6e-06 55.1 270 29.3
Sc17g0006420 Simmondsia chinensis HOM05D004441 ORTHO05D003109 9.6e-06 55.1 339 29.5


User provided reference genes

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