Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 1.2e-192 676.4 346 100.0
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 8.7e-156 553.9 347 82.1
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 2.5e-155 552.4 349 81.9
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 1.1e-139 500.4 353 75.4
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 6.3e-130 468.0 352 69.0
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 1.9e-126 456.4 352 68.2
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 3.9e-124 448.7 347 68.3
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 2.8e-122 442.6 352 66.2
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 4.8e-122 441.8 339 66.7
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 6.3e-122 441.4 356 65.2
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 3.1e-121 439.1 353 65.7
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 5.3e-121 438.3 355 64.8
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 3.4e-120 435.6 333 67.9
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 1.0e-119 434.1 355 64.5
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 3.8e-119 432.2 355 63.9
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 6.7e-116 421.4 352 63.6
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.5e-115 420.2 352 63.6
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 2.0e-115 419.9 352 63.6
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 2.6e-115 419.5 352 63.6
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 2.8e-114 416.0 360 62.5
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 3.7e-114 415.6 349 65.0
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 1.0e-111 407.5 268 76.5
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 1.0e-111 407.5 352 63.1
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 2.9e-111 406.0 363 61.2
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 1.5e-110 403.7 360 63.6
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 4.2e-110 402.1 352 62.5
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 4.0e-108 395.6 324 64.8
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 7.5e-107 391.3 344 63.1
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 9.7e-107 391.0 360 58.3
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 1.7e-106 390.2 268 72.8
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 3.7e-106 389.0 356 62.1
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 1.4e-105 387.1 277 71.1
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 2.4e-105 386.3 256 72.7
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 9.1e-105 384.4 306 65.4
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 1.2e-104 384.0 348 61.2
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 1.7e-103 380.2 256 75.0
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 2.9e-103 379.4 344 61.3
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 1.9e-102 376.7 358 59.2
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 4.2e-102 375.6 339 61.1
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 1.6e-101 373.6 347 59.7
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 1.0e-100 370.9 358 58.7
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 1.8e-100 370.2 277 68.2
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 8.8e-100 367.9 277 68.6
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 1.5e-99 367.1 322 63.0
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 2.6e-99 366.3 272 69.1
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 4.4e-99 365.5 272 68.4
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 4.4e-99 365.5 274 67.5
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 4.4e-99 365.5 272 68.8
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 9.8e-99 364.4 272 68.4
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 9.8e-99 364.4 272 69.1
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 9.8e-99 364.4 348 58.9
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 1.7e-98 363.6 348 58.3
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 4.1e-97 359.0 272 68.0
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 2.0e-96 356.7 357 55.5
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 3.5e-96 355.9 349 56.7
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 4.5e-96 355.5 268 66.8
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 7.7e-96 354.8 287 64.5
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 3.8e-95 352.4 348 57.8
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 5.0e-95 352.1 350 56.6
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 1.9e-94 350.1 293 61.8
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 1.9e-94 350.1 293 62.1
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 2.5e-94 349.7 329 57.4
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 1.2e-93 347.4 274 66.1
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 1.2e-93 347.4 357 57.4
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 2.3e-92 343.2 343 54.5
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 2.3e-92 343.2 297 61.6
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 3.0e-92 342.8 256 68.4
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 3.0e-92 342.8 348 54.6
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 4.0e-92 342.4 278 61.9
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 5.2e-92 342.0 364 53.3
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 8.9e-92 341.3 314 59.6
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 2.6e-91 339.7 324 54.9
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 5.7e-91 338.6 272 65.8
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 7.5e-91 338.2 278 61.2
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 2.2e-90 336.7 326 56.7
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 6.3e-90 335.1 357 53.2
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 8.3e-90 334.7 346 53.5
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 1.4e-89 334.0 312 58.0
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 3.1e-89 332.8 320 58.4
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 4.1e-89 332.4 284 59.2
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 7.0e-89 331.6 346 52.6
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 9.2e-89 331.3 309 56.0
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 1.6e-88 330.5 376 51.1
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 3.5e-88 329.3 267 62.9
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 2.3e-87 326.6 333 53.2
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 3.8e-87 325.9 363 53.7
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 1.1e-86 324.3 271 61.3
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 1.5e-86 323.9 253 67.6
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 4.3e-86 322.4 270 63.3
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 5.6e-86 322.0 267 62.2
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 2.1e-85 320.1 282 59.2
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 8.0e-85 318.2 294 56.8
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 1.0e-84 317.8 275 59.3
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 1.8e-84 317.0 355 50.7
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 4.0e-84 315.8 367 53.1
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 2.6e-83 313.2 356 51.4
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 5.4e-81 305.4 293 59.4
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 9.5e-78 294.7 275 57.1
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 1.6e-77 293.9 253 63.2
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 6.8e-76 288.5 355 49.6
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 2.2e-74 283.5 232 63.4
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 3.7e-74 282.7 235 62.6
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 9.2e-73 278.1 206 66.5
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 1.3e-71 274.2 221 67.0
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 2.3e-55 220.3 231 55.0
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 1.1e-44 184.9 162 59.3
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 4.9e-34 149.4 136 55.9
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 7.9e-32 142.1 282 37.2
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 2.5e-22 110.5 287 28.9
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 8.2e-21 105.5 200 39.0
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 4.1e-20 103.2 76 67.1
Cpa.g.sc609.4 Carica papaya HOM05D006917 ORTHO05D008297 2.2e-10 70.9 85 47.1
Aqoxy3G03603 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 2.5e-09 67.4 93 49.5
Oeu039864.1 Olea europaea HOM05D006917 ORTHO05D008297 1.2e-08 65.1 36 77.8
SMO300G0012 Selaginella moellendorffii HOM05D006917 ORTHO05D008297 1.0e-07 62.0 283 27.2
ATR0693G306 Amborella trichopoda HOM05D006917 ORTHO05D008297 2.0e-06 57.8 61 55.7


User provided reference genes

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