Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G159600 Carya illinoinensis HOM05D007037 ORTHO05D006691 3.0e-38 161.4 82 100.0
Actinidia09718 Actinidia chinensis HOM05D007037 ORTHO05D006691 3.5e-15 84.7 83 59.0
Ca_26471_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 1.5e-13 79.3 89 55.1
Potri.014G153900 Populus trichocarpa HOM05D009550 ORTHO05D006691 2.5e-13 78.6 89 57.3
CSS0005463 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 3.1e-11 71.6 87 51.7
Cc05_g04380 Coffea canephora HOM05D007037 ORTHO05D006691 5.3e-11 70.9 73 53.4
TAR624G1029 Trochodendron aralioides HOM05D007037 ORTHO05D006691 5.3e-11 70.9 84 51.2
Zm00001eb048920 Zea mays HOM05D007037 ORTHO05D006691 2.6e-10 68.6 81 51.9
HanXRQChr16g0506491 Helianthus annuus HOM05D007037 ORTHO05D006691 5.8e-10 67.4 75 54.7
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 3.8e-09 64.7 81 50.6
DCAR_019271 Daucus carota HOM05D007037 ORTHO05D006691 5.0e-09 64.3 79 44.3
Rhsim04G0053000 Rhododendron simsii HOM05D007037 ORTHO05D006691 5.0e-09 64.3 73 56.2
Os03g0574600 Oryza sativa ssp. japonica HOM05D007037 ORTHO05D006691 6.5e-09 63.9 90 48.9
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 8.4e-09 63.5 81 49.4
Cfa014392 Carpinus fangiana HOM05D009550 ORTHO05D006691 1.1e-08 63.2 82 48.8
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 1.1e-08 63.2 85 45.9
Lsat_1_v5_gn_1_11220 Lactuca sativa HOM05D003533 ORTHO05D004009 1.4e-08 62.8 76 50.0
Lj8E125T3 Lonicera japonica HOM05D009550 ORTHO05D006691 7.1e-08 60.5 69 55.1
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 1.2e-07 59.7 83 48.2
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 1.2e-07 59.7 83 47.0
Sabra14G0116400 Salix brachista HOM05D009550 ORTHO05D006691 1.6e-07 59.3 87 50.6
QL01p007120 Quercus lobata HOM05D009550 ORTHO05D006691 2.1e-07 58.9 85 44.7
ECA236G1425 Erigeron canadensis HOM05D007037 ORTHO05D006691 3.5e-07 58.2 78 44.9
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 3.5e-07 58.2 83 45.8
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 3.5e-07 58.2 83 45.8
CSS0026389 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 6.1e-07 57.4 82 46.3
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 6.1e-07 57.4 85 44.7
Manes.01G159201 Manihot esculenta HOM05D007037 ORTHO05D006691 6.1e-07 57.4 83 45.8
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 7.9e-07 57.0 84 46.4
Lsat_1_v5_gn_1_11280 Lactuca sativa HOM05D003533 ORTHO05D004009 1.0e-06 56.6 76 44.7
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 1.3e-06 56.2 82 43.9
CARHR019640 Cardamine hirsuta HOM05D003533 ORTHO05D004009 2.3e-06 55.5 75 44.0
CANSAT54G2961 Cannabis sativa HOM05D003533 ORTHO05D004009 3.0e-06 55.1 81 42.0
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 3.0e-06 55.1 81 46.9
Haze_12859 Corylus avellana HOM05D009550 ORTHO05D006691 3.9e-06 54.7 84 44.0
PSO013G0048 Papaver somniferum HOM05D003533 ORTHO05D004009 6.7e-06 53.9 80 43.8
MD05G1347800 Malus domestica HOM05D007037 ORTHO05D006691 8.7e-06 53.5 83 42.2
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 8.7e-06 53.5 82 43.9


User provided reference genes

Program Settings