Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G157200 Carya illinoinensis HOM05D002897 ORTHO05D008718 3.2e-139 498.4 256 100.0
Cfa014332 Carpinus fangiana HOM05D002897 ORTHO05D008718 3.6e-114 415.2 257 85.6
Haze_12787 Corylus avellana HOM05D002897 ORTHO05D008718 7.0e-110 401.0 277 78.7
QL08p031170 Quercus lobata HOM05D002897 ORTHO05D008718 1.7e-100 369.8 260 75.0
Thecc.01G180000 Theobroma cacao HOM05D002897 ORTHO05D008718 9.8e-96 354.0 257 72.4
TAR624G0001 Trochodendron aralioides HOM05D002897 ORTHO05D008718 1.7e-95 353.2 255 71.0
ClCG02G002140 Citrullus lanatus HOM05D002897 ORTHO05D008718 4.1e-94 348.6 258 70.5
MELO3C018838.2 Cucumis melo HOM05D002897 ORTHO05D008718 7.0e-94 347.8 258 69.8
Manes.13G067751 Manihot esculenta HOM05D002897 ORTHO05D008718 3.5e-93 345.5 257 69.3
Manes.13G067750 Manihot esculenta HOM05D002897 ORTHO05D008718 4.5e-93 345.1 257 69.3
CsaV3_7G003360 Cucumis sativus L. HOM05D002897 ORTHO05D008718 5.9e-93 344.7 258 69.4
Prupe.3G212700 Prunus persica HOM05D002897 ORTHO05D008718 7.7e-93 344.4 259 71.8
Nn1g07262 Nelumbo nucifera HOM05D002897 ORTHO05D008718 1.3e-92 343.6 256 68.8
Cpa.g.sc132.3 Carica papaya HOM05D002897 ORTHO05D008718 3.8e-92 342.0 257 68.9
Duzib138G1172 Durio zibethinus HOM05D002897 ORTHO05D008718 3.8e-92 342.0 251 69.7
Potri.014G156700 Populus trichocarpa HOM05D002897 ORTHO05D008718 4.2e-91 338.6 258 68.2
Gorai.007G171100 Gossypium raimondii HOM05D002897 ORTHO05D008718 2.1e-90 336.3 257 67.3
TWI18G1283 Tripterygium wilfordii HOM05D002897 ORTHO05D008718 3.6e-90 335.5 259 68.3
CSS0022002 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 6.1e-90 334.7 256 69.1
Gohir.D11G160500 Gossypium hirsutum HOM05D002897 ORTHO05D008718 6.1e-90 334.7 257 66.9
Hma1.2p1_2044F.1_g312350 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 8.0e-90 334.3 259 67.6
Actinidia09731 Actinidia chinensis HOM05D002897 ORTHO05D008718 1.0e-89 334.0 256 66.8
GSVIVG01030483001 Vitis vinifera HOM05D002897 ORTHO05D008718 1.4e-89 333.6 257 65.4
Ciclev10016301m.g Citrus clementina HOM05D002897 ORTHO05D008718 2.3e-89 332.8 262 66.8
Sed0013072 Sechium edule HOM05D002897 ORTHO05D008718 3.0e-89 332.4 258 68.6
Solyc07g049200.4 Solanum lycopersicum HOM05D002897 ORTHO05D008718 8.9e-89 330.9 259 64.9
Sabra14G0118500 Salix brachista HOM05D002897 ORTHO05D008718 3.4e-88 328.9 258 66.7
PGSC0003DMG400000696 Solanum tuberosum HOM05D002897 ORTHO05D008718 4.4e-88 328.6 259 64.5
Gohir.A11G153700 Gossypium hirsutum HOM05D002897 ORTHO05D008718 7.5e-88 327.8 257 66.1
Atru.chr6.3235 Acer truncatum HOM05D002897 ORTHO05D008718 6.3e-87 324.7 257 66.9
FAN05G4893 Fragaria x ananassa HOM05D002897 ORTHO05D008718 8.3e-87 324.3 259 65.6
FAN02G2770 Fragaria x ananassa HOM05D002897 ORTHO05D008718 2.4e-86 322.8 259 65.3
RcHm_v2.0_Chr2g0158471 Rosa chinensis HOM05D002897 ORTHO05D008718 3.1e-86 322.4 258 65.5
Sopen07g025210 Solanum pennellii HOM05D002897 ORTHO05D008718 9.2e-86 320.9 258 63.2
FvH4_6g42620 Fragaria vesca HOM05D002897 ORTHO05D008718 1.2e-85 320.5 259 64.5
vmacro12177 Vaccinium macrocarpon HOM05D002897 ORTHO05D008718 1.2e-85 320.5 258 64.3
Rhsim06G0166000 Rhododendron simsii HOM05D002897 ORTHO05D008718 2.7e-85 319.3 267 62.5
Dinv39736 Davidia involucrata HOM05D002897 ORTHO05D008718 1.7e-84 316.6 255 65.1
Nitab4.5_0012091g0010 Nicotiana tabacum HOM05D002897 ORTHO05D008718 1.7e-84 316.6 256 63.7
Peaxi162Scf00921g00023 Petunia axillaris HOM05D002897 ORTHO05D008718 2.5e-83 312.8 262 61.8
Glyma.14G046500 Glycine max HOM05D002897 ORTHO05D008718 7.3e-83 311.2 260 64.2
TPR.G14446 Trifolium pratense HOM05D002897 ORTHO05D008718 4.0e-81 305.4 258 62.4
Nitab4.5_0000482g0070 Nicotiana tabacum HOM05D002897 ORTHO05D008718 1.5e-80 303.5 261 61.3
Aqoxy1G03476 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 2.0e-80 303.1 262 63.0
MSTRG.14141 Avicennia marina HOM05D002897 ORTHO05D008718 2.6e-80 302.8 262 61.8
Ca_06120_v3 Cicer arietinum L. HOM05D002897 ORTHO05D008718 2.6e-80 302.8 257 61.1
HanXRQChr12g0373611 Helianthus annuus HOM05D002897 ORTHO05D008718 2.6e-80 302.8 258 59.3
THA.LOC104826141 Tarenaya hassleriana HOM05D002897 ORTHO05D008718 3.4e-80 302.4 255 63.9
Glyma.02G270500 Glycine max HOM05D002897 ORTHO05D008718 4.4e-80 302.0 259 62.2
SalBow1G3579 Salvia bowleyana HOM05D002897 ORTHO05D008718 7.5e-80 301.2 261 61.3
SGA_v2.0_scaffold49G18345 Striga asiatica HOM05D002897 ORTHO05D008718 7.5e-80 301.2 259 57.5
Oeu051891.2 Olea europaea HOM05D002897 ORTHO05D008718 1.7e-79 300.1 286 57.7
AL1G14810 Arabidopsis lyrata HOM05D002897 ORTHO05D008718 2.2e-79 299.7 258 61.6
arahy.Tifrunner.gnm1.ann1.QRVI7E Arachis hypogaea HOM05D002897 ORTHO05D008718 3.7e-79 298.9 265 58.1
Carub.0001s0433 Capsella rubella HOM05D002897 ORTHO05D008718 3.7e-79 298.9 257 62.3
ECA234G1553 Erigeron canadensis HOM05D002897 ORTHO05D008718 4.9e-79 298.5 258 59.7
SalBow1G2496 Salvia bowleyana HOM05D002897 ORTHO05D008718 8.3e-79 297.7 259 60.6
AT1G05060 Arabidopsis thaliana HOM05D002897 ORTHO05D008718 1.1e-78 297.4 260 61.5
VMungo0647G1784 Vigna mungo HOM05D002897 ORTHO05D008718 1.1e-78 297.4 260 61.2
Phvul.008G211400 Phaseolus vulgaris HOM05D002897 ORTHO05D008718 1.4e-78 297.0 258 62.0
Sc06g0009610 Simmondsia chinensis HOM05D002897 ORTHO05D008718 1.4e-78 297.0 259 59.1
Medtr5g085980 Medicago truncatula HOM05D002897 ORTHO05D008718 2.4e-78 296.2 255 60.4
Migut.H01234 Erythranthe guttata HOM05D002897 ORTHO05D008718 4.1e-78 295.4 267 59.2
Lsat_1_v5_gn_5_123640 Lactuca sativa HOM05D002897 ORTHO05D008718 4.1e-78 295.4 258 57.8
arahy.Tifrunner.gnm1.ann1.YEZ88R Arachis hypogaea HOM05D002897 ORTHO05D008718 5.4e-78 295.0 270 57.0
Thhalv10008572m.g Eutrema salsugineum HOM05D002897 ORTHO05D008718 9.2e-78 294.3 256 60.2
Sp1g03930 Schrenkiella parvula HOM05D002897 ORTHO05D008718 2.0e-77 293.1 256 60.5
BolC5t31920H Brassica oleracea HOM05D002897 ORTHO05D008718 4.6e-77 292.0 256 59.4
Hma1.2p1_1986F.1_g310090 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 6.0e-77 291.6 212 67.5
Lalb_Chr04g0249891 Lupinus albus HOM05D002897 ORTHO05D008718 2.3e-76 289.7 261 59.4
BcaC05g27288 Brassica carinata HOM05D002897 ORTHO05D008718 3.0e-76 289.3 256 59.0
BraA09t38920Z Brassica rapa HOM05D002897 ORTHO05D008718 3.0e-76 289.3 256 58.6
BcaB07g32946 Brassica carinata HOM05D002897 ORTHO05D008718 5.0e-76 288.5 256 59.8
Cc05_g03270 Coffea canephora HOM05D002897 ORTHO05D008718 5.0e-76 288.5 255 58.0
Psat4g114440 Pisum sativum HOM05D002897 ORTHO05D008718 6.6e-76 288.1 254 58.3
AUR62035641 Chenopodium quinoa HOM05D002897 ORTHO05D008718 8.6e-76 287.7 257 60.3
Eucgr.A01101 Eucalyptus grandis HOM05D002897 ORTHO05D008718 2.1e-74 283.1 265 55.8
LjContig00564g0002899 Lotus japonicus HOM05D002897 ORTHO05D008718 4.0e-73 278.9 258 58.5
C05p31940 Brassica napus HOM05D002897 ORTHO05D008718 1.2e-72 277.3 281 54.1
Lj8C128G4 Lonicera japonica HOM05D002897 ORTHO05D008718 1.2e-72 277.3 259 57.1
A09p33710 Brassica napus HOM05D002897 ORTHO05D008718 4.4e-72 275.4 281 53.4
MBI19_g24999_MAGBIO Magnolia biondii HOM05D002897 ORTHO05D008718 4.4e-72 275.4 259 59.5
CARHR004510 Cardamine hirsuta HOM05D002897 ORTHO05D008718 1.3e-71 273.9 258 57.0
AUR62017163 Chenopodium quinoa HOM05D002897 ORTHO05D008718 4.9e-71 271.9 249 58.6
EL10Ac4g07512 Beta vulgaris HOM05D002897 ORTHO05D008718 5.4e-70 268.5 262 54.2
MD17G1102200 Malus domestica HOM05D002897 ORTHO05D008718 1.0e-68 264.2 215 68.8
Aqoxy1G03469 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 2.8e-66 256.1 258 55.4
PSO210G2604 Papaver somniferum HOM05D002897 ORTHO05D008718 1.2e-64 250.8 258 52.3
Os06g0239700 Oryza sativa ssp. japonica HOM05D002897 ORTHO05D008718 1.7e-63 246.9 257 49.4
CDE07G0516 Ceratophyllum demersum HOM05D002897 ORTHO05D008718 6.4e-63 245.0 255 49.0
Aa31LG1G19710 Aethionema arabicum HOM05D002897 ORTHO05D008718 5.4e-62 241.9 303 46.2
Hma1.2p1_2044F.1_g312360 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 9.2e-62 241.1 194 68.0
FAN14G2576 Fragaria x ananassa HOM05D002897 ORTHO05D008718 1.6e-61 240.4 258 54.7
Zm00001eb280010 Zea mays HOM05D002897 ORTHO05D008718 1.7e-60 236.9 255 49.4
DCAR_012931 Daucus carota HOM05D002897 ORTHO05D008718 1.1e-57 227.6 261 50.6
HPP92_017354 Vanilla planifolia HOM05D002897 ORTHO05D008718 1.2e-53 214.2 249 48.2
COL.COLO4_21853 Corchorus olitorius HOM05D002897 ORTHO05D008718 1.5e-51 207.2 161 69.6
unitig_21.g21003 Utricularia gibba HOM05D002897 ORTHO05D008718 1.9e-46 190.3 158 57.0
SEGI_41028 Sequoiadendron giganteum HOM05D002897 ORTHO05D008718 2.1e-42 176.8 247 42.5
CSS0034853 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 6.2e-42 175.3 201 49.8
Pp3c23_20260 Physcomitrium patens HOM05D002897 ORTHO05D008718 1.4e-30 137.5 247 38.1
ATR0059G011 Amborella trichopoda HOM05D002897 ORTHO05D008718 7.9e-29 131.7 147 55.1
AagrBONN_evm.TU.Sc2ySwM_117.2821 Anthoceros agrestis HOM05D002897 ORTHO05D008718 6.7e-28 128.6 239 36.0
MD06G1049400 Malus domestica HOM05D002897 ORTHO05D008718 4.0e-25 119.4 127 58.3
ATR0059G040 Amborella trichopoda HOM05D002897 ORTHO05D008718 7.4e-19 98.6 95 50.5
CANSAT64G1786 Cannabis sativa HOM05D002897 ORTHO05D008718 3.4e-16 89.7 64 60.9
SMO290G0011 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 2.7e-13 80.1 221 31.2
SMO356G0703 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 7.9e-13 78.6 221 31.2
Aa31sc72G10 Aethionema arabicum HOM05D002897 ORTHO05D008718 3.7e-10 69.7 106 38.7
HPP92_017340 Vanilla planifolia HOM05D002897 ORTHO05D008718 5.0e-07 59.3 112 39.3


User provided reference genes

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