Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G155900 Carya illinoinensis HOM05D007498 ORTHO05D009384 2.0e-212 742.3 394 100.0
QL08p030918 Quercus lobata HOM05D007498 ORTHO05D009384 9.2e-162 573.9 388 78.6
Dinv08726 Davidia involucrata HOM05D007498 ORTHO05D009384 3.3e-151 538.9 400 70.2
GSVIVG01030496001 Vitis vinifera HOM05D007498 ORTHO05D009384 3.1e-149 532.3 394 71.6
Manes.12G070200 Manihot esculenta HOM05D007498 ORTHO05D009384 3.5e-145 518.8 402 67.7
COL.COLO4_21864 Corchorus olitorius HOM05D007498 ORTHO05D009384 6.7e-144 514.6 393 68.2
TAR629G3061 Trochodendron aralioides HOM05D007498 ORTHO05D009384 1.5e-143 513.5 397 69.3
TWI18G0826 Tripterygium wilfordii HOM05D007498 ORTHO05D009384 1.9e-143 513.1 393 69.5
CSS0038240 Camellia sinensis var. sinensis HOM05D007498 ORTHO05D009384 5.6e-143 511.5 387 69.3
Thecc.01G181300 Theobroma cacao HOM05D007498 ORTHO05D009384 1.3e-142 510.4 394 68.5
Sabra14G0119400 Salix brachista HOM05D007498 ORTHO05D009384 6.2e-142 508.1 416 66.1
Prupe.3G211200 Prunus persica HOM05D007498 ORTHO05D009384 1.1e-141 507.3 393 67.9
Ciclev10015493m.g Citrus clementina HOM05D007498 ORTHO05D009384 3.1e-141 505.8 394 68.8
RcHm_v2.0_Chr2g0158311 Rosa chinensis HOM05D007498 ORTHO05D009384 1.2e-140 503.8 393 67.4
Hma1.2p1_2381F.1_g320980 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 2.0e-140 503.1 393 67.4
Hma1.2p1_0445F.1_g154420 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 5.8e-140 501.5 403 66.3
Gorai.001G216600 Gossypium raimondii HOM05D007498 ORTHO05D009384 1.7e-139 500.0 387 66.1
CANSAT64G1398 Cannabis sativa HOM05D007498 ORTHO05D009384 4.9e-139 498.4 395 65.8
Actinidia13735 Actinidia chinensis HOM05D007498 ORTHO05D009384 3.2e-138 495.7 391 67.0
Gohir.A07G187000 Gossypium hirsutum HOM05D007498 ORTHO05D009384 4.6e-137 491.9 398 65.8
Actinidia09741 Actinidia chinensis HOM05D007498 ORTHO05D009384 2.3e-136 489.6 393 66.2
MD17G1103400 Malus domestica HOM05D007498 ORTHO05D009384 2.4e-133 479.6 394 65.0
Eucgr.A01096 Eucalyptus grandis HOM05D007498 ORTHO05D009384 5.3e-133 478.4 402 64.7
Rhsim09G0054300 Rhododendron simsii HOM05D007498 ORTHO05D009384 7.6e-132 474.6 434 60.4
Rhsim06G0166900 Rhododendron simsii HOM05D007498 ORTHO05D009384 1.3e-131 473.8 434 60.4
FAN05G5059 Fragaria x ananassa HOM05D007498 ORTHO05D009384 1.4e-130 470.3 390 63.1
Lj6g0022389 Lotus japonicus HOM05D007498 ORTHO05D009384 4.2e-130 468.8 403 62.8
FvH4_6g42420 Fragaria vesca HOM05D007498 ORTHO05D009384 9.3e-130 467.6 390 64.1
Cc05_g03070 Coffea canephora HOM05D007498 ORTHO05D009384 5.1e-128 461.8 374 61.8
Phvul.006G012811 Phaseolus vulgaris HOM05D007498 ORTHO05D009384 1.3e-126 457.2 394 61.9
TPR.G34497 Trifolium pratense HOM05D007498 ORTHO05D009384 2.2e-126 456.4 403 58.6
Sed0020195 Sechium edule HOM05D007498 ORTHO05D009384 1.1e-125 454.1 387 63.8
Nn1g03383 Nelumbo nucifera HOM05D007498 ORTHO05D009384 3.1e-125 452.6 397 62.2
PGR042G1731 Punica granatum HOM05D007498 ORTHO05D009384 4.1e-125 452.2 395 62.0
vmacro12166 Vaccinium macrocarpon HOM05D007498 ORTHO05D009384 6.9e-125 451.4 484 54.5
Gorai.001G095600 Gossypium raimondii HOM05D007498 ORTHO05D009384 9.0e-125 451.1 394 62.9
Medtr3g080260 Medicago truncatula HOM05D007498 ORTHO05D009384 4.5e-124 448.7 403 59.3
Carub.0003s2696 Capsella rubella HOM05D007498 ORTHO05D009384 5.9e-124 448.4 391 61.1
CsaV3_6G037690 Cucumis sativus L. HOM05D007498 ORTHO05D009384 1.7e-123 446.8 391 62.1
Sc21g0001170 Simmondsia chinensis HOM05D007498 ORTHO05D009384 2.2e-123 446.4 381 62.7
AT2G05755 Arabidopsis thaliana HOM05D007498 ORTHO05D009384 5.5e-122 441.8 389 61.2
AL3G43270 Arabidopsis lyrata HOM05D007498 ORTHO05D009384 1.2e-121 440.7 389 60.7
THA.LOC104815344 Tarenaya hassleriana HOM05D007498 ORTHO05D009384 4.6e-121 438.7 400 60.8
Sp3g24210 Schrenkiella parvula HOM05D007498 ORTHO05D009384 7.9e-121 438.0 393 60.6
Lj1A780G53 Lonicera japonica HOM05D007498 ORTHO05D009384 1.3e-120 437.2 401 58.6
CARHR103340 Cardamine hirsuta HOM05D007498 ORTHO05D009384 6.7e-120 434.9 392 60.7
MBI19_g41387_MAGBIO Magnolia biondii HOM05D007498 ORTHO05D009384 9.7e-119 431.0 376 59.6
Aqoxy1G04193 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 1.3e-118 430.6 366 61.5
Gohir.D07G193500 Gossypium hirsutum HOM05D007498 ORTHO05D009384 4.8e-118 428.7 315 69.2
A03p44690 Brassica napus HOM05D007498 ORTHO05D009384 1.1e-117 427.6 392 60.2
PSO541G2474 Papaver somniferum HOM05D007498 ORTHO05D009384 1.4e-117 427.2 384 60.4
Nitab4.5_0006063g0010 Nicotiana tabacum HOM05D007498 ORTHO05D009384 6.9e-117 424.9 381 58.0
C03p55520 Brassica napus HOM05D007498 ORTHO05D009384 1.2e-116 424.1 394 59.6
Aa31LG8G11370 Aethionema arabicum HOM05D007498 ORTHO05D009384 1.5e-116 423.7 363 62.8
BcaC01g03153 Brassica carinata HOM05D007498 ORTHO05D009384 1.5e-116 423.7 394 59.9
BcaB08g34508 Brassica carinata HOM05D007498 ORTHO05D009384 1.0e-115 421.0 392 59.9
BraA03t13603Z Brassica rapa HOM05D007498 ORTHO05D009384 5.0e-115 418.7 405 58.3
Sopen05g026100 Solanum pennellii HOM05D007498 ORTHO05D009384 8.5e-115 417.9 374 57.0
PSO675G1300 Papaver somniferum HOM05D007498 ORTHO05D009384 2.5e-114 416.4 413 56.7
Nitab4.5_0000019g0370 Nicotiana tabacum HOM05D007498 ORTHO05D009384 3.2e-114 416.0 367 58.6
BolC3t17828H Brassica oleracea HOM05D000228 ORTHO05D001122 7.2e-114 414.8 407 57.7
MD09G1113300 Malus domestica HOM05D007498 ORTHO05D009384 7.2e-114 414.8 330 65.2
Solyc05g042050.4 Solanum lycopersicum HOM05D007498 ORTHO05D009384 7.2e-114 414.8 374 56.7
HanXRQChr12g0373631 Helianthus annuus HOM05D007498 ORTHO05D009384 5.1e-112 408.7 383 55.9
Lsat_1_v5_gn_5_123880 Lactuca sativa HOM05D007498 ORTHO05D009384 8.8e-112 407.9 374 54.5
Peaxi162Scf00100g01524 Petunia axillaris HOM05D007498 ORTHO05D009384 5.7e-111 405.2 370 57.6
Lsat_1_v5_gn_7_95281 Lactuca sativa HOM05D007498 ORTHO05D009384 9.7e-111 404.4 409 53.1
MELO3C014431.2 Cucumis melo HOM05D007498 ORTHO05D009384 2.0e-108 396.7 431 53.4
Duzib138G1101 Durio zibethinus HOM05D007498 ORTHO05D009384 2.2e-107 393.3 396 57.3
ATR0059G023 Amborella trichopoda HOM05D007498 ORTHO05D009384 3.3e-103 379.4 378 54.5
ClCG07G002420 Citrullus lanatus HOM05D007498 ORTHO05D009384 1.3e-99 367.5 387 55.8
Gohir.A07G083200 Gossypium hirsutum HOM05D007498 ORTHO05D009384 1.8e-93 347.1 278 66.5
Gohir.D07G089300 Gossypium hirsutum HOM05D007498 ORTHO05D009384 1.2e-92 344.4 279 66.3
Thhalv10002583m.g Eutrema salsugineum HOM05D007498 ORTHO05D009384 1.7e-91 340.5 398 52.3
FAN09G2551 Fragaria x ananassa HOM05D007498 ORTHO05D009384 2.6e-87 326.6 314 57.6
Psat5g106880 Pisum sativum HOM05D007498 ORTHO05D009384 1.0e-83 314.7 289 58.1
Potri.014G157700 Populus trichocarpa HOM05D007498 ORTHO05D009384 2.9e-83 313.2 234 70.1
SEGI_23048 Sequoiadendron giganteum HOM05D007498 ORTHO05D009384 3.1e-77 293.1 344 44.5
ECA234G3795 Erigeron canadensis HOM05D007498 ORTHO05D009384 4.3e-74 282.7 296 52.7
Ca_16281_v3 Cicer arietinum L. HOM05D007498 ORTHO05D009384 8.9e-72 275.0 283 55.5
Aqoxy1G02942 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 2.7e-68 263.5 252 55.6
FAN14G0249 Fragaria x ananassa HOM05D007498 ORTHO05D001133 7.8e-68 261.9 390 43.6
CDE07G0657 Ceratophyllum demersum HOM05D000323 ORTHO05D009384 9.5e-66 255.0 339 46.3
MD09G1113200 Malus domestica HOM05D007498 ORTHO05D009384 3.3e-58 229.9 233 55.8
DCAR_019260 Daucus carota HOM05D007498 ORTHO05D001133 5.6e-58 229.2 167 64.7
Cpa.g.sc132.15 Carica papaya HOM05D007498 ORTHO05D009384 3.7e-54 216.5 165 69.1
AagrBONN_evm.TU.Sc2ySwM_344.4295 Anthoceros agrestis HOM05D007498 ORTHO05D009384 7.8e-52 208.8 350 34.0
Haze_12773 Corylus avellana HOM05D007498 ORTHO05D009384 8.9e-48 195.3 205 61.0
Mapoly0005s0243 Marchantia polymorpha HOM05D007498 ORTHO05D009384 2.6e-39 167.2 347 32.0
Pp3c17_21590 Physcomitrium patens HOM05D007498 ORTHO05D009384 1.1e-37 161.8 294 35.0
SMO146G0054 Selaginella moellendorffii HOM05D007498 ORTHO05D009384 1.6e-33 147.9 294 35.4
VMungo0540G0169 Vigna mungo HOM05D007498 ORTHO05D009384 1.2e-31 141.7 108 66.7
Atru.chr6.3249 Acer truncatum HOM05D007498 ORTHO05D009384 1.8e-27 127.9 91 67.0
Atru.chr6.3248 Acer truncatum HOM05D007498 ORTHO05D009384 2.4e-24 117.5 71 83.1
Aqoxy1G02941 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 3.9e-19 100.1 94 55.3
VMungo0540G1885 Vigna mungo HOM05D007498 ORTHO05D009384 1.3e-14 85.1 67 64.2
Cfa025227 Carpinus fangiana HOM05D007498 ORTHO05D009384 2.6e-07 60.8 280 24.6
BcaB06g26853 Brassica carinata HOM05D007498 ORTHO05D009384 5.9e-07 59.7 146 35.6


User provided reference genes

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