Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G149700 Carya illinoinensis HOM05D003171 ORTHO05D000921 4.3e-161 571.2 286 100.0
CiPaw.08G101500 Carya illinoinensis HOM05D003171 ORTHO05D000921 3.2e-140 501.9 313 83.1
CiPaw.10G123700 Carya illinoinensis HOM05D003171 ORTHO05D000921 2.2e-133 479.2 313 80.2
CiPaw.15G091800 Carya illinoinensis HOM05D003171 ORTHO05D000921 3.6e-131 471.9 292 84.2
CiPaw.15G025900 Carya illinoinensis HOM05D003171 ORTHO05D000921 1.2e-54 217.6 277 47.7
CiPaw.15G026500 Carya illinoinensis HOM05D003171 ORTHO05D000921 1.2e-54 217.6 277 47.7
CiPaw.14G058600 Carya illinoinensis HOM05D003171 ORTHO05D000921 2.9e-40 169.9 181 49.2
CiPaw.09G111600 Carya illinoinensis HOM05D003171 ORTHO05D000921 4.2e-39 166.0 188 48.4
CiPaw.01G106700 Carya illinoinensis HOM05D003171 ORTHO05D000921 1.8e-34 150.6 318 31.4
CiPaw.10G092200 Carya illinoinensis HOM05D003171 ORTHO05D000921 6.5e-32 142.1 284 35.2
CiPaw.02G052800 Carya illinoinensis HOM05D003171 ORTHO05D000921 4.2e-31 139.4 252 34.1
CiPaw.05G159600 Carya illinoinensis HOM05D003171 ORTHO05D000921 5.5e-31 139.0 301 29.6
CiPaw.05G225500 Carya illinoinensis HOM05D003171 ORTHO05D000921 5.2e-29 132.5 240 36.2
CiPaw.06G117600 Carya illinoinensis HOM05D003171 ORTHO05D000921 2.0e-28 130.6 165 38.8
CiPaw.13G114900 Carya illinoinensis HOM05D003171 ORTHO05D000921 1.3e-27 127.9 126 45.2
CiPaw.06G138500 Carya illinoinensis HOM05D003171 ORTHO05D000921 3.7e-27 126.3 300 31.7
CiPaw.10G034700 Carya illinoinensis HOM05D003171 ORTHO05D000921 4.8e-27 125.9 155 39.4
CiPaw.12G018500 Carya illinoinensis HOM05D003171 ORTHO05D000921 8.2e-27 125.2 285 32.6
QL02p070399 Quercus lobata HOM05D003171 ORTHO05D000921 1.0e-16 91.7 310 25.5
QL09p032434 Quercus lobata HOM05D003171 ORTHO05D000921 1.0e-16 91.7 310 25.5
QL10p053818 Quercus lobata HOM05D003171 ORTHO05D000921 1.0e-16 91.7 310 25.5
QL05p040133 Quercus lobata HOM05D003171 ORTHO05D000921 1.3e-16 91.3 310 25.2
QL05p062248 Quercus lobata HOM05D003171 ORTHO05D000921 1.3e-16 91.3 310 25.5
QL06p033820 Quercus lobata HOM05D003171 ORTHO05D000921 2.2e-16 90.5 300 27.0
QL09p025174 Quercus lobata HOM05D003171 ORTHO05D000921 2.2e-16 90.5 310 25.2
Lj7A726T26 Lonicera japonica HOM05D008338 ORTHO05D000921 2.8e-14 83.6 280 24.6
Lju1319C4G9 Lonicera japonica HOM05D008338 ORTHO05D000921 3.6e-14 83.2 276 25.0
Lj1A366G18 Lonicera japonica HOM05D008338 ORTHO05D000921 4.7e-14 82.8 279 24.4
CANSAT01G0669 Cannabis sativa HOM05D000665 ORTHO05D000921 3.0e-13 80.1 307 23.8
CANSAT54G0727 Cannabis sativa HOM05D007209 ORTHO05D000921 1.2e-12 78.2 285 24.6
CANSAT54G0360 Cannabis sativa HOM05D000665 ORTHO05D000921 1.5e-12 77.8 267 25.1
Oeu052247.2 Olea europaea HOM05D003171 ORTHO05D000921 9.8e-12 75.1 291 23.0
PGR042G0470 Punica granatum HOM05D003171 ORTHO05D000921 1.7e-11 74.3 307 24.1
PGR031G0833 Punica granatum HOM05D003171 ORTHO05D000921 2.2e-11 73.9 307 24.4
PGR044G0862 Punica granatum HOM05D003171 ORTHO05D000921 2.2e-11 73.9 307 24.4
PGR102G1953 Punica granatum HOM05D003171 ORTHO05D000921 2.2e-11 73.9 307 24.4
QL10p052222 Quercus lobata HOM05D003171 ORTHO05D000921 1.1e-10 71.6 146 30.1
TAR626G0805 Trochodendron aralioides HOM05D000665 ORTHO05D000285 1.1e-10 71.6 305 22.6
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 1.8e-10 70.9 151 30.5
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 7.0e-10 68.9 299 22.1
QL10p052249 Quercus lobata HOM05D003171 ORTHO05D000921 7.0e-10 68.9 145 27.6
QL03p032583 Quercus lobata HOM05D000034 ORTHO05D000921 1.6e-09 67.8 170 26.5
QL04p024672 Quercus lobata HOM05D000034 ORTHO05D000921 1.6e-09 67.8 170 26.5
COL.COLO4_15868 Corchorus olitorius HOM05D003171 ORTHO05D000921 2.0e-09 67.4 146 27.4
QL07p023043 Quercus lobata HOM05D003171 ORTHO05D000921 2.0e-09 67.4 297 24.2
PGR004G0383 Punica granatum HOM05D003171 ORTHO05D000921 2.7e-09 67.0 307 23.1
Psat7g015480 Pisum sativum HOM05D000665 ORTHO05D000921 3.5e-09 66.6 101 31.7
PGR042G0219 Punica granatum HOM05D003171 ORTHO05D000921 3.5e-09 66.6 307 23.5
Psat7g176640 Pisum sativum HOM05D000665 ORTHO05D000921 5.9e-09 65.9 101 31.7
PGR119G1897 Punica granatum HOM05D003171 ORTHO05D000921 7.8e-09 65.5 279 24.0
Solyc02g062220.2 Solanum lycopersicum HOM05D000665 ORTHO05D003147 7.8e-09 65.5 276 22.5
AUR62040593 Chenopodium quinoa HOM05D007209 ORTHO05D000921 1.3e-08 64.7 291 22.3
Nn8g39982 Nelumbo nucifera HOM05D013718 ORTHO05D000285 1.3e-08 64.7 290 23.1
Psat5g151680 Pisum sativum HOM05D000665 ORTHO05D000921 1.7e-08 64.3 100 31.0
PGR119G0399 Punica granatum HOM05D003171 ORTHO05D000921 1.7e-08 64.3 140 30.0
TWI63G0719 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 1.7e-08 64.3 240 25.4
Oeu010697.1 Olea europaea HOM05D003171 ORTHO05D000921 2.9e-08 63.5 257 23.3
Oeu059139.1 Olea europaea HOM05D003171 ORTHO05D000921 2.9e-08 63.5 142 26.8
Psat0s94g0040 Pisum sativum HOM05D000665 ORTHO05D000921 3.8e-08 63.2 100 31.0
CANSAT21G0626 Cannabis sativa HOM05D000665 ORTHO05D000921 5.0e-08 62.8 307 22.5
CANSAT25G0660 Cannabis sativa HOM05D000665 ORTHO05D000921 5.0e-08 62.8 248 24.2
MD12G1140100 Malus domestica HOM05D002354 ORTHO05D002469 5.0e-08 62.8 138 25.4
Medtr4g051480 Medicago truncatula HOM05D001243 ORTHO05D000843 8.6e-08 62.0 283 21.6
Medtr4g092300 Medicago truncatula HOM05D001243 ORTHO05D000843 8.6e-08 62.0 283 21.6
Gorai.006G019900 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.5e-07 61.2 294 21.4
PGR031G1004 Punica granatum HOM05D003171 ORTHO05D000921 1.5e-07 61.2 140 30.0
PSO700G0266 Papaver somniferum HOM05D003171 ORTHO05D000921 3.3e-07 60.1 168 26.2
CANSAT01G1528 Cannabis sativa HOM05D000665 ORTHO05D000921 5.6e-07 59.3 145 24.1
Lj9A689T48 Lonicera japonica HOM05D008338 ORTHO05D000921 5.6e-07 59.3 133 26.3
Lj2A609T18 Lonicera japonica HOM05D008338 ORTHO05D000921 7.3e-07 58.9 216 23.6
Oeu059221.1 Olea europaea HOM05D003171 ORTHO05D000921 9.5e-07 58.5 208 23.6
PGR044G1317 Punica granatum HOM05D003171 ORTHO05D000921 9.5e-07 58.5 301 23.9
QL02p005994 Quercus lobata HOM05D000034 ORTHO05D000037 9.5e-07 58.5 95 30.5
PGR119G2496 Punica granatum HOM05D003171 ORTHO05D000921 1.2e-06 58.2 140 28.6
CANSAT64G2197 Cannabis sativa HOM05D003171 ORTHO05D000921 1.6e-06 57.8 233 24.5
PGR119G1784 Punica granatum HOM05D003171 ORTHO05D000037 2.1e-06 57.4 145 26.9
PGR142G0886 Punica granatum HOM05D003171 ORTHO05D000921 2.8e-06 57.0 307 24.4
GSVIVG01035986001 Vitis vinifera HOM05D000665 ORTHO05D000140 2.8e-06 57.0 173 23.1
GSVIVG01038689001 Vitis vinifera HOM05D000665 ORTHO05D000921 2.8e-06 57.0 259 23.9
Ciclev10033416m.g Citrus clementina HOM05D003171 ORTHO05D000921 3.6e-06 56.6 91 29.7
QL93p0356_0077 Quercus lobata HOM05D024079 ORTHO05D000921 6.1e-06 55.8 191 23.0
COL.COLO4_20107 Corchorus olitorius HOM05D007209 ORTHO05D000921 8.0e-06 55.5 151 29.1
PSO724G0339 Papaver somniferum HOM05D003171 ORTHO05D000921 8.0e-06 55.5 305 22.3
PGR102G0211 Punica granatum HOM05D003171 ORTHO05D000921 8.0e-06 55.5 145 26.9
TWI09G1246 Tripterygium wilfordii HOM05D000665 ORTHO05D000921 8.0e-06 55.5 148 21.6
TWI23G0996 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 8.0e-06 55.5 287 24.4
TWI34G1578 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 8.0e-06 55.5 287 24.4


User provided reference genes

Program Settings