Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 6.7e-90 334.0 163 100.0
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 2.0e-54 216.1 171 67.3
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 1.9e-52 209.5 170 62.4
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 6.7e-50 201.1 170 61.8
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 3.1e-47 192.2 136 72.8
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 5.5e-44 181.4 187 51.9
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 1.2e-43 180.3 187 52.4
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 1.6e-43 179.9 181 51.4
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 4.7e-43 178.3 183 51.4
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 4.0e-42 175.3 139 62.6
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 1.2e-41 173.7 161 59.6
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 1.3e-40 170.2 160 56.9
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 3.5e-38 162.2 185 49.7
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 5.9e-38 161.4 165 52.7
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 3.8e-37 158.7 174 48.9
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 6.5e-37 157.9 164 53.7
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 1.5e-36 156.8 164 52.4
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 1.5e-36 156.8 195 47.7
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 2.5e-36 156.0 171 48.5
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 7.2e-36 154.5 153 51.6
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 7.2e-36 154.5 126 63.5
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 7.2e-36 154.5 163 53.4
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 9.4e-36 154.1 140 57.1
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 2.1e-35 152.9 182 45.6
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 3.6e-35 152.1 164 52.4
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 3.6e-35 152.1 131 57.3
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 6.1e-35 151.4 180 46.1
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 8.0e-35 151.0 154 53.9
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 1.0e-34 150.6 169 48.5
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 2.3e-34 149.4 143 53.1
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 3.0e-34 149.1 168 52.4
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 3.0e-34 149.1 175 48.6
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 4.0e-34 148.7 160 51.2
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 4.0e-34 148.7 165 49.1
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 4.0e-34 148.7 154 54.5
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 5.2e-34 148.3 171 50.3
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 6.8e-34 147.9 163 48.5
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 8.8e-34 147.5 156 50.0
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 8.8e-34 147.5 177 46.3
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 1.2e-33 147.1 157 49.0
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 1.2e-33 147.1 142 54.2
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 1.5e-33 146.7 159 49.1
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 2.6e-33 146.0 168 48.2
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 3.4e-33 145.6 156 50.0
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 4.4e-33 145.2 158 49.4
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 4.4e-33 145.2 138 53.6
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 7.5e-33 144.4 184 45.1
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 9.8e-33 144.1 158 48.7
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 1.7e-32 143.3 177 44.1
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 2.2e-32 142.9 159 47.8
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 3.7e-32 142.1 170 45.3
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 6.3e-32 141.4 171 46.2
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 6.3e-32 141.4 146 49.3
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 6.3e-32 141.4 163 49.7
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 6.3e-32 141.4 101 66.3
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 6.3e-32 141.4 155 49.0
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 8.3e-32 141.0 92 69.6
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 8.3e-32 141.0 174 46.6
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 8.3e-32 141.0 161 47.2
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 2.4e-31 139.4 184 44.6
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 2.4e-31 139.4 189 41.8
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 3.1e-31 139.0 156 47.4
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 3.1e-31 139.0 164 48.2
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 3.1e-31 139.0 178 46.1
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 7.0e-31 137.9 187 41.7
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 1.6e-30 136.7 178 44.9
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 2.7e-30 136.0 102 64.7
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 4.5e-30 135.2 191 40.8
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 4.5e-30 135.2 162 51.2
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 4.5e-30 135.2 189 41.3
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 3.8e-29 132.1 160 46.9
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 3.8e-29 132.1 167 47.3
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 3.8e-29 132.1 155 48.4
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-29 132.1 113 53.1
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 8.6e-29 131.0 145 49.7
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 1.5e-28 130.2 177 44.1
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 1.9e-28 129.8 150 48.0
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 4.2e-28 128.6 162 43.8
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 9.5e-28 127.5 159 45.3
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 1.6e-27 126.7 92 65.2
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 4.7e-27 125.2 173 42.2
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 6.1e-27 124.8 171 42.1
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 2.3e-26 122.9 162 43.2
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 2.3e-26 122.9 171 41.5
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 4.0e-26 122.1 185 42.2
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 4.0e-26 122.1 86 66.3
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 8.9e-26 120.9 138 43.5
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 4.4e-25 118.6 176 40.9
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 7.5e-25 117.9 136 44.1
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 3.7e-24 115.5 131 44.3
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 3.7e-24 115.5 128 50.8
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 6.3e-24 114.8 131 44.3
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 6.3e-24 114.8 133 51.1
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 8.3e-24 114.4 135 45.2
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 1.8e-18 96.7 86 52.3
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 1.8e-18 96.7 86 52.3
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 1.2e-17 94.0 158 33.5
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 2.0e-17 93.2 79 58.2
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 3.5e-14 82.4 160 31.2
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 7.8e-14 81.3 139 34.5
Aqoxy5G00011 Aquilegia oxysepala HOM05D007399 ORTHO05D009341 1.1e-10 70.9 178 32.6
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 5.2e-10 68.6 64 46.9
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 5.2e-10 68.6 77 41.6


User provided reference genes

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