Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G139600 Carya illinoinensis HOM05D000207 ORTHO05D127287 2.4e-47 191.8 95 100.0
SGA_v2.0_scaffold13G06504 Striga asiatica HOM05D000207 ORTHO05D004473 1.4e-07 59.7 63 54.0
MSTRG.27513 Avicennia marina HOM05D000207 ORTHO05D004473 9.2e-07 57.0 61 54.1
MSTRG.9118 Avicennia marina HOM05D000207 ORTHO05D004473 9.2e-07 57.0 61 50.8
BcaC05g29451 Brassica carinata HOM05D000207 ORTHO05D004473 9.2e-07 57.0 37 73.0
BraA05t22653Z Brassica rapa HOM05D000207 ORTHO05D004473 9.2e-07 57.0 37 73.0
SalBow4G0022 Salvia bowleyana HOM05D000207 ORTHO05D004473 1.6e-06 56.2 61 52.5
BcaC05g29453 Brassica carinata HOM05D005033 ORTHO05D004473 2.7e-06 55.5 64 48.4
BcaB04g21234 Brassica carinata HOM05D000207 ORTHO05D004473 3.5e-06 55.1 51 56.9
BolC5t34408H Brassica oleracea HOM05D005033 ORTHO05D004473 3.5e-06 55.1 64 46.9
Dinv31278 Davidia involucrata HOM05D001491 ORTHO05D004473 3.5e-06 55.1 59 50.8
Dinv44468 Davidia involucrata HOM05D002163 ORTHO05D002386 3.5e-06 55.1 57 52.6
A01p41690 Brassica napus HOM05D005033 ORTHO05D004473 4.5e-06 54.7 34 76.5
C05p57510 Brassica napus HOM05D005033 ORTHO05D004473 4.5e-06 54.7 70 44.3
BolC1t05385H Brassica oleracea HOM05D000207 ORTHO05D004473 4.5e-06 54.7 34 76.5
BraA01t04243Z Brassica rapa HOM05D000207 ORTHO05D004473 4.5e-06 54.7 34 76.5
Cpa.g.sc128.64 Carica papaya HOM05D000207 ORTHO05D004473 4.5e-06 54.7 51 52.9
Sp3g08820 Schrenkiella parvula HOM05D000207 ORTHO05D004473 4.5e-06 54.7 52 59.6
unitig_899.g14484 Utricularia gibba HOM05D000207 ORTHO05D004473 4.5e-06 54.7 62 53.2
Cc02_g10410 Coffea canephora HOM05D000207 ORTHO05D004473 5.9e-06 54.3 58 51.7
Thhalv10020612m.g Eutrema salsugineum HOM05D000207 ORTHO05D004473 5.9e-06 54.3 51 54.9
Peaxi162Scf00253g00141 Petunia axillaris HOM05D000207 ORTHO05D004473 5.9e-06 54.3 60 50.0
RcHm_v2.0_Chr1g0361861 Rosa chinensis HOM05D000207 ORTHO05D004473 5.9e-06 54.3 39 66.7
Duzib128G1411 Durio zibethinus HOM05D000207 ORTHO05D004473 7.8e-06 53.9 35 74.3
Solyc03g071750.3 Solanum lycopersicum HOM05D000207 ORTHO05D004473 7.8e-06 53.9 52 55.8


User provided reference genes

Program Settings