Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G131600 Carya illinoinensis HOM05D008370 ORTHO05D009732 6.8e-34 146.7 74 100.0
CiPaw.04G088900 Carya illinoinensis HOM05D008370 ORTHO05D009732 4.9e-16 87.4 78 69.2
Cfa002786 Carpinus fangiana HOM05D008370 ORTHO05D009732 2.4e-15 85.1 74 62.2
Haze_25084 Corylus avellana HOM05D008370 ORTHO05D009732 2.4e-15 85.1 74 62.2
QL06p031379 Quercus lobata HOM05D008370 ORTHO05D009732 6.0e-14 80.5 74 60.8
Dinv05773 Davidia involucrata HOM05D008370 ORTHO05D009732 2.8e-11 71.6 75 58.7
Glyma.08G144800 Glycine max HOM05D008370 ORTHO05D009732 1.2e-09 66.2 76 52.6
Cfa002787 Carpinus fangiana HOM05D008370 ORTHO05D009732 1.5e-09 65.9 72 52.8
Glyma.05G186300 Glycine max HOM05D008370 ORTHO05D009732 2.6e-09 65.1 76 51.3
Lj4g0015780 Lotus japonicus HOM05D008370 ORTHO05D009732 4.5e-09 64.3 68 50.0
Glyma.06G148100 Glycine max HOM05D008370 ORTHO05D009732 1.0e-08 63.2 81 51.9
Thecc.07G145600 Theobroma cacao HOM05D008370 ORTHO05D009732 1.3e-08 62.8 68 51.5
Lj1g0003311 Lotus japonicus HOM05D008370 ORTHO05D009732 1.7e-08 62.4 74 50.0
Manes.13G080360 Manihot esculenta HOM05D008370 ORTHO05D009732 1.7e-08 62.4 72 56.9
TAR376G0884 Trochodendron aralioides HOM05D008370 ORTHO05D009732 2.2e-08 62.0 77 50.6
Prupe.6G166000 Prunus persica HOM05D015647 ORTHO05D009732 4.9e-08 60.8 77 50.6
CiPaw.04G088800 Carya illinoinensis HOM05D008370 ORTHO05D009732 8.4e-08 60.1 74 48.6
COL.COLO4_22370 Corchorus olitorius HOM05D008370 ORTHO05D009732 8.4e-08 60.1 76 47.4
Prupe.6G166400 Prunus persica HOM05D008370 ORTHO05D009732 1.9e-07 58.9 76 50.0
QL06p031372 Quercus lobata HOM05D008370 ORTHO05D009732 3.2e-07 58.2 70 44.3
Sabra07G0065300 Salix brachista HOM05D008370 ORTHO05D009732 3.2e-07 58.2 69 49.3
COL.COLO4_17423 Corchorus olitorius HOM05D008370 ORTHO05D009732 4.2e-07 57.8 74 52.7
MD01G1015700 Malus domestica HOM05D008370 ORTHO05D009732 4.2e-07 57.8 71 46.5
arahy.Tifrunner.gnm1.ann1.Q4N452 Arachis hypogaea HOM05D010746 ORTHO05D009732 1.2e-06 56.2 80 42.5
arahy.Tifrunner.gnm1.ann1.R1SWRL Arachis hypogaea HOM05D010746 ORTHO05D009732 1.2e-06 56.2 80 42.5
Manes.12G145500 Manihot esculenta HOM05D008370 ORTHO05D009732 1.6e-06 55.8 77 49.4
CSS0039971 Camellia sinensis var. sinensis HOM05D008370 ORTHO05D009732 2.1e-06 55.5 73 52.1
Duzib187G1656 Durio zibethinus HOM05D008370 ORTHO05D009732 2.1e-06 55.5 72 47.2
Potri.007G077300 Populus trichocarpa HOM05D008370 ORTHO05D009732 2.1e-06 55.5 70 48.6
Glyma.04G217800 Glycine max HOM05D008370 ORTHO05D009732 2.7e-06 55.1 79 50.6
Potri.005G087000 Populus trichocarpa HOM05D008370 ORTHO05D009732 2.7e-06 55.1 70 50.0
Thecc.01G117100 Theobroma cacao HOM05D008370 ORTHO05D009732 3.5e-06 54.7 73 49.3
Phvul.002G267404 Phaseolus vulgaris HOM05D008370 ORTHO05D009732 4.6e-06 54.3 73 42.5
Eucgr.I00294 Eucalyptus grandis HOM05D008370 ORTHO05D009732 6.0e-06 53.9 70 44.3
Psat5g065200 Pisum sativum HOM05D010746 ORTHO05D009732 6.0e-06 53.9 78 44.9
MD15G1335300 Malus domestica HOM05D015647 ORTHO05D009732 7.9e-06 53.5 86 41.9


User provided reference genes

Program Settings