Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G114900 Carya illinoinensis HOM05D003347 ORTHO05D003821 5.7e-57 225.3 281 100.0
Cfa002207 Carpinus fangiana HOM05D003347 ORTHO05D003821 4.6e-30 136.0 276 64.5
TWI79G0161 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 2.3e-29 133.7 279 56.6
PSO063G2612 Papaver somniferum HOM05D003347 ORTHO05D003821 1.4e-26 124.4 189 60.3
Haze_25385 Corylus avellana HOM05D003347 ORTHO05D003821 7.6e-25 118.6 136 70.6
TAR381G0729 Trochodendron aralioides HOM05D003347 ORTHO05D003821 1.7e-24 117.5 190 66.3
TWI31G0129 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 6.4e-24 115.5 278 50.7
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 1.1e-23 114.8 193 54.9
CDE08G0312 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 3.2e-23 113.2 276 56.2
Aqoxy6G00189 Aquilegia oxysepala HOM05D003347 ORTHO05D003821 2.7e-22 110.2 276 67.8
Nn5g28237 Nelumbo nucifera HOM05D003347 ORTHO05D003821 2.7e-22 110.2 190 68.4
Dinv05136 Davidia involucrata HOM05D000040 ORTHO05D000267 1.0e-21 108.2 180 70.0
Atru.chr6.636 Acer truncatum HOM05D003347 ORTHO05D003821 5.1e-21 105.9 189 60.8
TAR376G0009 Trochodendron aralioides HOM05D003347 ORTHO05D003821 8.7e-21 105.1 193 49.7
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 1.5e-20 104.4 207 51.2
CSS0043936 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 1.5e-20 104.4 207 64.3
Dinv34344 Davidia involucrata HOM05D003347 ORTHO05D003821 1.5e-20 104.4 274 58.4
Nitab4.5_0000496g0140 Nicotiana tabacum HOM05D003347 ORTHO05D003821 4.3e-20 102.8 184 60.9
TAR628G0882 Trochodendron aralioides HOM05D003347 ORTHO05D003821 1.3e-19 101.3 279 55.9
ATR0684G168 Amborella trichopoda HOM05D003347 ORTHO05D003821 4.8e-19 99.4 189 67.2
MD15G1137800 Malus domestica HOM05D003347 ORTHO05D003821 8.1e-19 98.6 192 66.1
Eucgr.H05071 Eucalyptus grandis HOM05D003347 ORTHO05D003821 1.1e-18 98.2 190 65.3
Gohir.D12G040600 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.1e-18 98.2 190 66.3
Glyma.06G158900 Glycine max HOM05D003347 ORTHO05D003821 6.9e-18 95.5 136 66.9
SGA_v2.0_scaffold1G00306 Striga asiatica HOM05D003347 ORTHO05D003821 1.5e-17 94.4 189 65.6
PGR102G0439 Punica granatum HOM05D003347 ORTHO05D003821 2.0e-17 94.0 189 60.3
QL10p039663 Quercus lobata HOM05D003347 ORTHO05D003821 2.0e-17 94.0 145 47.6
Actinidia26147 Actinidia chinensis HOM05D003347 ORTHO05D003821 2.6e-17 93.6 190 55.8
Thecc.01G142300 Theobroma cacao HOM05D003347 ORTHO05D003821 5.8e-17 92.4 125 68.8
Dinv19368 Davidia involucrata HOM05D003347 ORTHO05D003821 9.9e-17 91.7 193 69.4
Gohir.D09G005500 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.7e-16 90.9 125 75.2
Gorai.006G007100 Gossypium raimondii HOM05D003347 ORTHO05D003821 1.7e-16 90.9 125 75.2
HPP92_009365 Vanilla planifolia HOM05D003347 ORTHO05D003821 1.7e-16 90.9 107 54.2
SGA_v2.0_scaffold189G40392 Striga asiatica HOM05D000087 ORTHO05D000793 2.2e-16 90.5 192 55.7
CiPaw.05G044400 Carya illinoinensis HOM05D003347 ORTHO05D003821 3.8e-16 89.7 189 57.7
AUR62014268 Chenopodium quinoa HOM05D003347 ORTHO05D003821 3.8e-16 89.7 190 59.5
Rhsim10G0131200 Rhododendron simsii HOM05D003347 ORTHO05D003821 3.8e-16 89.7 276 63.8
MBI03_g33029_MAGBIO Magnolia biondii HOM05D003347 ORTHO05D003821 4.9e-16 89.4 279 54.1
Lj4A831G75 Lonicera japonica HOM05D003347 ORTHO05D003821 8.4e-16 88.6 66 74.2
Cfa005522 Carpinus fangiana HOM05D003347 ORTHO05D003821 1.1e-15 88.2 190 65.8
Dinv24283 Davidia involucrata HOM05D003347 ORTHO05D003821 1.1e-15 88.2 193 58.0
Gohir.A09G006400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.1e-15 88.2 125 72.0
CANSAT11G2200 Cannabis sativa HOM05D003347 ORTHO05D003821 1.9e-15 87.4 190 64.7
AUR62006920 Chenopodium quinoa HOM05D003347 ORTHO05D003821 1.9e-15 87.4 129 63.6
TPR.G28695 Trifolium pratense HOM05D003347 ORTHO05D003821 1.9e-15 87.4 136 68.4
Gohir.A04G127400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 2.4e-15 87.0 190 60.0
Phvul.009G151400 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 2.4e-15 87.0 136 75.7
Haze_01671 Corylus avellana HOM05D003347 ORTHO05D003821 3.2e-15 86.7 190 60.5
CSS0030084 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 4.2e-15 86.3 108 63.9
MD15G1423300 Malus domestica HOM05D003347 ORTHO05D003821 4.2e-15 86.3 135 70.4
Nitab4.5_0013117g0020 Nicotiana tabacum HOM05D003347 ORTHO05D003821 4.2e-15 86.3 124 74.2
HanXRQChr03g0071751 Helianthus annuus HOM05D003347 ORTHO05D003821 5.4e-15 85.9 111 50.5
Lj6g0014149 Lotus japonicus HOM05D003347 ORTHO05D003821 5.4e-15 85.9 190 63.2
Thecc.02G038200 Theobroma cacao HOM05D003347 ORTHO05D003821 9.3e-15 85.1 190 65.8
TPR.G2109 Trifolium pratense HOM05D003347 ORTHO05D003821 9.3e-15 85.1 188 68.6
Gohir.D04G172100 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.2e-14 84.7 190 59.5
Oeu037839.1 Olea europaea HOM05D003347 ORTHO05D003821 1.2e-14 84.7 189 57.7
TWI14G1287 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.2e-14 84.7 190 56.3
CDE06G2684 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 2.1e-14 84.0 279 54.1
Sc09g0002030 Simmondsia chinensis HOM05D003347 ORTHO05D003821 2.1e-14 84.0 131 60.3
Hma1.2p1_0217F.1_g092040 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 2.7e-14 83.6 193 59.6
Sed0017913 Sechium edule HOM05D003347 ORTHO05D003821 3.5e-14 83.2 65 70.8
PGSC0003DMG400023323 Solanum tuberosum HOM05D003347 ORTHO05D003821 4.6e-14 82.8 121 53.7
VMungo1309G3119 Vigna mungo HOM05D003347 ORTHO05D003821 4.6e-14 82.8 136 74.3
CsaV3_6G037360 Cucumis sativus L. HOM05D003347 ORTHO05D003821 6.0e-14 82.4 138 69.6
Medtr2g007150 Medicago truncatula HOM05D003347 ORTHO05D003821 6.0e-14 82.4 188 62.8
Prupe.4G280500 Prunus persica HOM05D003347 ORTHO05D003821 6.0e-14 82.4 184 67.4
Sc03g0004210 Simmondsia chinensis HOM05D003347 ORTHO05D003821 6.0e-14 82.4 119 48.7
GSVIVG01022926001 Vitis vinifera HOM05D003347 ORTHO05D003821 7.9e-14 82.0 276 58.7
MELO3C014381.2 Cucumis melo HOM05D003347 ORTHO05D003821 1.0e-13 81.6 138 71.0
Gorai.008G042400 Gossypium raimondii HOM05D003347 ORTHO05D003821 1.0e-13 81.6 190 56.3
FAN28G2623 Fragaria x ananassa HOM05D003347 ORTHO05D003821 1.3e-13 81.3 179 55.3
Lj9C306T9 Lonicera japonica HOM05D003347 ORTHO05D003821 2.3e-13 80.5 135 73.3
Sed0005094 Sechium edule HOM05D003347 ORTHO05D003821 2.3e-13 80.5 183 63.4
Gorai.012G161200 Gossypium raimondii HOM05D003347 ORTHO05D003821 3.0e-13 80.1 211 54.5
PGR042G0677 Punica granatum HOM05D003347 ORTHO05D003821 3.0e-13 80.1 191 61.8
arahy.Tifrunner.gnm1.ann1.CXB9HG Arachis hypogaea HOM05D003347 ORTHO05D003821 3.9e-13 79.7 190 65.3
arahy.Tifrunner.gnm1.ann1.N22SFW Arachis hypogaea HOM05D003347 ORTHO05D003821 3.9e-13 79.7 190 65.3
COL.COLO4_12116 Corchorus olitorius HOM05D012218 ORTHO05D003821 5.1e-13 79.3 191 54.5
Manes.07G015700 Manihot esculenta HOM05D003347 ORTHO05D003821 5.1e-13 79.3 194 58.2
Manes.12G147600 Manihot esculenta HOM05D003347 ORTHO05D003821 5.1e-13 79.3 101 70.3
Lj1g0014274 Lotus japonicus HOM05D003347 ORTHO05D003821 8.7e-13 78.6 136 71.3
Lalb_Chr11g0068781 Lupinus albus HOM05D003347 ORTHO05D003821 8.7e-13 78.6 129 72.9
Peaxi162Scf00152g01328 Petunia axillaris HOM05D003347 ORTHO05D003821 8.7e-13 78.6 202 61.9
Phvul.006G214600 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 8.7e-13 78.6 190 58.9
Psat5g058160 Pisum sativum HOM05D003347 ORTHO05D003821 8.7e-13 78.6 57 73.7
unitig_60.g25508 Utricularia gibba HOM05D003347 ORTHO05D003821 8.7e-13 78.6 60 73.3
Solyc05g056460.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 2.5e-12 77.0 112 52.7
Lalb_Chr18g0060901 Lupinus albus HOM05D003347 ORTHO05D003821 4.3e-12 76.3 190 64.2
EL10Ac6g14071 Beta vulgaris HOM05D003347 ORTHO05D003821 7.4e-12 75.5 111 54.1
vmacro19891 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 9.6e-12 75.1 193 60.1
Migut.H00863 Erythranthe guttata HOM05D003347 ORTHO05D003821 1.6e-11 74.3 97 55.7
Cpa.g.sc37.62 Carica papaya HOM05D003347 ORTHO05D003821 2.1e-11 73.9 53 71.7
Cc02_g22510 Coffea canephora HOM05D003347 ORTHO05D003821 2.1e-11 73.9 126 62.7
Duzib132G0710 Durio zibethinus HOM05D003347 ORTHO05D003821 2.1e-11 73.9 190 61.6
Zm00001eb197610 Zea mays HOM05D003347 ORTHO05D003821 2.1e-11 73.9 187 44.9
HanXRQChr01g0017031 Helianthus annuus HOM05D003347 ORTHO05D003821 2.8e-11 73.6 66 60.6
vmacro01761 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 2.8e-11 73.6 53 69.8
Atru.chr4.1125 Acer truncatum HOM05D003347 ORTHO05D003821 3.7e-11 73.2 194 51.0
CDE06G2842 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 3.7e-11 73.2 279 58.4
AUR62042720 Chenopodium quinoa HOM05D003347 ORTHO05D003821 6.2e-11 72.4 190 52.6
Hma1.2p1_0930F.1_g238020 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 8.1e-11 72.0 92 56.5
Lsat_1_v5_gn_9_118960 Lactuca sativa HOM05D003347 ORTHO05D003821 8.1e-11 72.0 57 70.2
Potri.019G001900 Populus trichocarpa HOM05D003347 ORTHO05D003821 8.1e-11 72.0 131 59.5
DCAR_029250 Daucus carota HOM05D003347 ORTHO05D003821 1.1e-10 71.6 108 57.4
Oeu008894.1 Olea europaea HOM05D003347 ORTHO05D003821 1.8e-10 70.9 135 63.7
Oeu008895.1 Olea europaea HOM05D003347 ORTHO05D003821 1.8e-10 70.9 135 63.7
Psat5g058080 Pisum sativum HOM05D003347 ORTHO05D003821 2.4e-10 70.5 55 67.3
MSTRG.23472 Avicennia marina HOM05D003347 ORTHO05D003821 3.1e-10 70.1 111 68.5
MD08G1229400 Malus domestica HOM05D003347 ORTHO05D003821 4.0e-10 69.7 126 73.0
Gohir.A12G031700 Gossypium hirsutum HOM05D003347 ORTHO05D003821 5.3e-10 69.3 190 62.1
Potri.001G306100 Populus trichocarpa HOM05D003347 ORTHO05D003821 6.9e-10 68.9 85 64.7
Aa31LG11G7390 Aethionema arabicum HOM05D012923 ORTHO05D014747 1.2e-09 68.2 191 61.3
Solyc01g104160.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 1.2e-09 68.2 126 72.2
Zm00001eb113690 Zea mays HOM05D003347 ORTHO05D003821 2.0e-09 67.4 187 48.1
Ca_00076_v3 Cicer arietinum L. HOM05D005880 ORTHO05D007114 2.6e-09 67.0 126 72.2
MELO3C023199.2 Cucumis melo HOM05D003347 ORTHO05D003821 2.6e-09 67.0 97 70.1
ECA236G0662 Erigeron canadensis HOM05D003347 ORTHO05D003821 2.6e-09 67.0 191 51.8
VMungo0540G0141 Vigna mungo HOM05D003347 ORTHO05D003821 2.6e-09 67.0 126 69.0
RcHm_v2.0_Chr2g0123211 Rosa chinensis HOM05D003347 ORTHO05D003821 3.4e-09 66.6 128 58.6
Sopen05g034850 Solanum pennellii HOM05D003347 ORTHO05D003821 3.4e-09 66.6 107 49.5
QL11p018508 Quercus lobata HOM05D003347 ORTHO05D003821 4.5e-09 66.2 122 73.0
THA.LOC104823661 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 1.3e-08 64.7 187 54.5
TWI59G0889 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.3e-08 64.7 96 43.8
CARHR051920 Cardamine hirsuta HOM05D003347 ORTHO05D003821 1.7e-08 64.3 126 61.1
Lsat_1_v5_gn_1_80721 Lactuca sativa HOM05D002427 ORTHO05D002818 1.7e-08 64.3 121 47.9
Hma1.2p1_1197F.1_g266100 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 2.2e-08 63.9 53 66.0
Nitab4.5_0003344g0020 Nicotiana tabacum HOM05D003347 ORTHO05D003821 2.2e-08 63.9 126 68.3
Oeu033124.1 Olea europaea HOM05D002729 ORTHO05D003163 2.2e-08 63.9 53 64.2
ECA248G0339 Erigeron canadensis HOM05D003347 ORTHO05D003821 2.9e-08 63.5 58 69.0
FAN16G0856 Fragaria x ananassa HOM05D003347 ORTHO05D003821 2.9e-08 63.5 191 55.5
EL10Ac4g09689 Beta vulgaris HOM05D003347 ORTHO05D003821 6.4e-08 62.4 139 52.5
Hund12985 Selenicereus undatus HOM05D003347 ORTHO05D003821 6.4e-08 62.4 105 45.7
A06p07670 Brassica napus HOM05D003347 ORTHO05D003821 8.4e-08 62.0 198 47.5
CiPaw.06G147300 Carya illinoinensis HOM05D003347 ORTHO05D003821 8.4e-08 62.0 190 56.8
FAN19G3034 Fragaria x ananassa HOM05D003347 ORTHO05D003821 8.4e-08 62.0 175 56.0
SEGI_15810 Sequoiadendron giganteum HOM05D003347 ORTHO05D003821 8.4e-08 62.0 187 54.5
THA.LOC104819278 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 8.4e-08 62.0 206 48.1
Aa31LG1G3970 Aethionema arabicum HOM05D003347 ORTHO05D003821 1.9e-07 60.8 127 59.1
ClCG09G014210 Citrullus lanatus HOM05D003347 ORTHO05D003821 1.9e-07 60.8 125 69.6
CDE06G0340 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 2.4e-07 60.5 109 63.3
Peaxi162Scf00011g00421 Petunia axillaris HOM05D003347 ORTHO05D003821 2.4e-07 60.5 44 68.2
Psat1g221480 Pisum sativum HOM05D003347 ORTHO05D003821 2.4e-07 60.5 214 48.1
SHI11423 Sapria himalayana HOM05D003347 ORTHO05D003821 2.4e-07 60.5 46 67.4
BraA06t23968Z Brassica rapa HOM05D003347 ORTHO05D003821 4.2e-07 59.7 194 47.4
Actinidia06603 Actinidia chinensis HOM05D003347 ORTHO05D003821 5.5e-07 59.3 268 61.2
arahy.Tifrunner.gnm1.ann1.0YHR6E Arachis hypogaea HOM05D003347 ORTHO05D003821 7.1e-07 58.9 183 55.7
arahy.Tifrunner.gnm1.ann1.3X6E38 Arachis hypogaea HOM05D003347 ORTHO05D003821 7.1e-07 58.9 183 55.7
arahy.Tifrunner.gnm1.ann1.X7GISI Arachis hypogaea HOM05D003347 ORTHO05D003821 7.1e-07 58.9 136 66.2
RcHm_v2.0_Chr5g0049401 Rosa chinensis HOM05D003347 ORTHO05D003821 7.1e-07 58.9 191 58.6
SMO163G0068 Selaginella moellendorffii HOM05D003347 ORTHO05D003821 9.3e-07 58.5 183 44.3
Nn1g08766 Nelumbo nucifera HOM05D003347 ORTHO05D003821 1.2e-06 58.2 195 54.4
DCAR_031791 Daucus carota HOM05D003347 ORTHO05D003821 2.1e-06 57.4 41 70.7
BolC5t29665H Brassica oleracea HOM05D003347 ORTHO05D003821 4.6e-06 56.2 194 49.0
Carub.0001s1045 Capsella rubella HOM05D003347 ORTHO05D003821 4.6e-06 56.2 190 54.2
Ciclev10002126m.g Citrus clementina HOM05D003347 ORTHO05D003821 4.6e-06 56.2 190 58.9


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