Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G114100 Carya illinoinensis HOM05D003643 ORTHO05D005001 3.8e-293 1010.7 509 100.0
Cfa023544 Carpinus fangiana HOM05D003643 ORTHO05D005001 3.3e-252 874.8 491 89.0
Atru.chr1.1970 Acer truncatum HOM05D003643 ORTHO05D005001 1.4e-234 816.2 487 82.8
Potri.004G075600 Populus trichocarpa HOM05D003643 ORTHO05D005001 4.0e-234 814.7 504 80.6
Cpa.g.sc178.8 Carica papaya HOM05D003643 ORTHO05D005001 1.5e-233 812.8 492 81.5
Glyma.20G021900 Glycine max HOM05D003643 ORTHO05D005001 1.5e-233 812.8 490 82.0
Glyma.07G222900 Glycine max HOM05D003643 ORTHO05D005001 2.0e-233 812.4 491 81.9
Dinv35809 Davidia involucrata HOM05D003643 ORTHO05D005001 7.6e-233 810.4 496 80.4
Phvul.L009001 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 5.4e-231 804.3 495 81.0
Phvul.L001601 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.6e-230 802.7 495 80.8
VMungo0251G0454 Vigna mungo HOM05D003643 ORTHO05D005001 2.7e-230 802.0 495 80.2
Phvul.003G000252 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.5e-230 801.6 498 80.5
Eucgr.D01040 Eucalyptus grandis HOM05D003643 ORTHO05D005001 4.6e-230 801.2 500 80.0
CANSAT21G2447 Cannabis sativa HOM05D003643 ORTHO05D005001 1.7e-229 799.3 489 80.6
MD10G1234900 Malus domestica HOM05D003643 ORTHO05D005001 1.7e-229 799.3 500 79.4
TWI77G0757 Tripterygium wilfordii HOM05D003643 ORTHO05D005001 5.1e-229 797.7 501 80.6
MD05G1254800 Malus domestica HOM05D003643 ORTHO05D005001 1.5e-228 796.2 491 80.4
Prupe.4G109100 Prunus persica HOM05D003643 ORTHO05D005001 3.3e-228 795.0 490 80.6
Actinidia22386 Actinidia chinensis HOM05D003643 ORTHO05D005001 4.3e-228 794.7 492 79.7
GSVIVG01012096001 Vitis vinifera HOM05D003643 ORTHO05D005001 1.6e-227 792.7 487 80.3
Lj1g0022937 Lotus japonicus HOM05D003643 ORTHO05D005001 2.1e-227 792.3 490 79.6
Lj1g0023184 Lotus japonicus HOM05D003643 ORTHO05D005001 1.4e-226 789.6 490 79.2
PGR083G1065 Punica granatum HOM05D003643 ORTHO05D005001 2.4e-226 788.9 495 79.0
Sabra04G0050300 Salix brachista HOM05D003643 ORTHO05D005001 3.1e-226 788.5 504 79.0
CSS0044821 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 3.8e-224 781.6 498 77.7
Ca_18772_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 3.8e-224 781.6 490 78.2
Cc09_g06330 Coffea canephora HOM05D003643 ORTHO05D005001 3.2e-223 778.5 502 77.7
Lj1C1143T1 Lonicera japonica HOM05D003643 ORTHO05D005001 2.1e-222 775.8 499 76.2
FvH4_3g12070 Fragaria vesca HOM05D003643 ORTHO05D005001 3.5e-222 775.0 502 77.3
FAN21G1938 Fragaria x ananassa HOM05D003643 ORTHO05D005001 3.5e-222 775.0 503 77.1
THA.LOC104822105 Tarenaya hassleriana HOM05D003643 ORTHO05D005001 4.6e-222 774.6 489 78.3
RcHm_v2.0_Chr5g0019781 Rosa chinensis HOM05D003643 ORTHO05D005001 3.9e-221 771.5 496 77.8
Thecc.04G162500 Theobroma cacao HOM05D003643 ORTHO05D005001 5.1e-221 771.2 499 78.4
Psat0s5231g0040 Pisum sativum HOM05D003643 ORTHO05D005001 8.7e-221 770.4 495 77.6
CsaV3_1G046560 Cucumis sativus L. HOM05D003643 ORTHO05D005001 1.1e-220 770.0 492 79.5
FAN25G0143 Fragaria x ananassa HOM05D003643 ORTHO05D005001 1.5e-220 769.6 501 76.6
Gohir.D10G121400 Gossypium hirsutum HOM05D003643 ORTHO05D005001 1.5e-220 769.6 490 79.4
Gorai.011G133500 Gossypium raimondii HOM05D003643 ORTHO05D005001 1.5e-220 769.6 490 79.4
Duzib268G1178 Durio zibethinus HOM05D003643 ORTHO05D005001 3.3e-220 768.5 501 77.2
Lalb_Chr16g0385301 Lupinus albus HOM05D003643 ORTHO05D005001 7.4e-220 767.3 490 77.1
Oeu060347.1 Olea europaea HOM05D003643 ORTHO05D005001 1.4e-218 763.1 484 77.1
MELO3C021772.2 Cucumis melo HOM05D003643 ORTHO05D005001 2.4e-218 762.3 492 78.9
TAR365G0076 Trochodendron aralioides HOM05D003643 ORTHO05D005001 2.4e-218 762.3 490 78.0
vmacro11251 Vaccinium macrocarpon HOM05D003643 ORTHO05D005001 2.0e-217 759.2 509 75.4
Sed0017297 Sechium edule HOM05D003643 ORTHO05D005001 5.8e-217 757.7 489 78.3
Nitab4.5_0002056g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 7.6e-217 757.3 492 76.0
arahy.Tifrunner.gnm1.ann1.PVMC8E Arachis hypogaea HOM05D003643 ORTHO05D005001 9.9e-217 756.9 484 76.9
Psat6g043080 Pisum sativum HOM05D003643 ORTHO05D005001 9.9e-217 756.9 495 76.8
Thhalv10013358m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 2.2e-216 755.7 489 76.3
Sc22g0000430 Simmondsia chinensis HOM05D003643 ORTHO05D005001 2.9e-216 755.4 485 76.7
BcaB01g04707 Brassica carinata HOM05D003643 ORTHO05D005001 3.8e-216 755.0 490 75.9
Lsat_1_v5_gn_5_36401 Lactuca sativa HOM05D003643 ORTHO05D005001 8.4e-216 753.8 480 77.7
AT5G22480 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 7.1e-215 750.7 489 76.1
AL6G33500 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 1.2e-214 750.0 489 76.1
BcaC04g19578 Brassica carinata HOM05D003643 ORTHO05D005001 1.6e-214 749.6 493 75.1
TPR.G20995 Trifolium pratense HOM05D003643 ORTHO05D005001 1.6e-214 749.6 497 74.8
A10p18340 Brassica napus HOM05D003643 ORTHO05D005001 3.5e-214 748.4 490 74.9
Solyc02g069120.3 Solanum lycopersicum HOM05D003643 ORTHO05D005001 3.5e-214 748.4 489 74.6
C09p54110 Brassica napus HOM05D003643 ORTHO05D005001 6.0e-214 747.7 493 74.6
BolC9t58281H Brassica oleracea HOM05D003643 ORTHO05D005001 6.0e-214 747.7 493 74.6
BcaC01g06578 Brassica carinata HOM05D003643 ORTHO05D005001 7.9e-214 747.3 490 75.3
BraA10t43914Z Brassica rapa HOM05D003643 ORTHO05D005001 1.8e-213 746.1 490 74.7
Carub.0006s2022 Capsella rubella HOM05D003643 ORTHO05D005001 1.8e-213 746.1 488 76.0
COL.COLO4_08070 Corchorus olitorius HOM05D003643 ORTHO05D005001 1.8e-213 746.1 527 72.9
Sopen02g018250 Solanum pennellii HOM05D003643 ORTHO05D005001 2.3e-213 745.7 489 74.4
A03p10790 Brassica napus HOM05D003643 ORTHO05D005001 3.0e-213 745.3 490 75.1
CAN.G1222.6 Capsicum annuum HOM05D003643 ORTHO05D005001 3.0e-213 745.3 492 74.8
PGSC0003DMG400010363 Solanum tuberosum HOM05D003643 ORTHO05D005001 3.0e-213 745.3 489 74.6
FAN16G1159 Fragaria x ananassa HOM05D003643 ORTHO05D005001 5.1e-213 744.6 503 75.0
HanXRQChr07g0189641 Helianthus annuus HOM05D003643 ORTHO05D005001 5.1e-213 744.6 480 76.7
Rhsim04G0157300 Rhododendron simsii HOM05D003643 ORTHO05D005001 1.5e-212 743.0 526 73.4
SpUn0005_0160 Schrenkiella parvula HOM05D003643 ORTHO05D005001 1.9e-212 742.7 488 75.8
AT5G37340 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 4.3e-212 741.5 488 75.6
Thhalv10027733m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 5.6e-212 741.1 489 75.5
BcaB08g36427 Brassica carinata HOM05D003643 ORTHO05D005001 2.1e-211 739.2 502 73.3
AL7G45920 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 4.8e-211 738.0 486 76.1
Medtr4g083780 Medicago truncatula HOM05D003643 ORTHO05D005001 4.8e-211 738.0 490 75.3
SGA_v2.0_scaffold298G47674 Striga asiatica HOM05D003643 ORTHO05D005001 4.8e-211 738.0 510 72.5
Migut.M01969 Erythranthe guttata HOM05D003643 ORTHO05D005001 3.1e-210 735.3 486 75.3
CARHR191050 Cardamine hirsuta HOM05D003643 ORTHO05D005001 4.0e-210 734.9 489 73.8
Sp6g22770 Schrenkiella parvula HOM05D003643 ORTHO05D005001 4.0e-210 734.9 489 75.3
BraA03t10388Z Brassica rapa HOM05D003643 ORTHO05D005001 5.3e-210 734.6 501 73.3
ECA238G3555 Erigeron canadensis HOM05D003643 ORTHO05D005001 6.9e-210 734.2 482 75.1
BolC3t13712H Brassica oleracea HOM05D003643 ORTHO05D005001 1.2e-209 733.4 493 74.2
HanXRQChr14g0433091 Helianthus annuus HOM05D003643 ORTHO05D005001 2.0e-209 732.6 485 75.1
SalBow8G4557 Salvia bowleyana HOM05D003643 ORTHO05D005001 2.0e-209 732.6 502 72.1
SalBow8G5428 Salvia bowleyana HOM05D003643 ORTHO05D005001 2.0e-209 732.6 502 72.1
BcaC07g37705 Brassica carinata HOM05D003643 ORTHO05D005001 4.5e-209 731.5 495 74.9
A08p10150 Brassica napus HOM05D003643 ORTHO05D005001 1.0e-208 730.3 495 74.9
CARHR215770 Cardamine hirsuta HOM05D003643 ORTHO05D005001 1.0e-208 730.3 488 74.4
Lj1g0023481 Lotus japonicus HOM05D003643 ORTHO05D005001 1.0e-208 730.3 490 74.7
BcaB04g18097 Brassica carinata HOM05D003643 ORTHO05D005001 1.3e-208 729.9 486 75.3
BraA08t33014Z Brassica rapa HOM05D003643 ORTHO05D005001 2.9e-208 728.8 496 75.0
arahy.Tifrunner.gnm1.ann1.EU78CH Arachis hypogaea HOM05D003643 ORTHO05D005001 1.5e-204 716.5 484 74.2
Nn7g37591 Nelumbo nucifera HOM05D003643 ORTHO05D005001 9.7e-204 713.8 490 72.7
Hund14697 Selenicereus undatus HOM05D003643 ORTHO05D005001 1.1e-202 710.3 504 70.8
ECA246G0187 Erigeron canadensis HOM05D003643 ORTHO05D005001 6.9e-202 707.6 487 74.1
Oeu052674.3 Olea europaea HOM05D003643 ORTHO05D005001 1.5e-201 706.4 456 76.1
AUR62010551 Chenopodium quinoa HOM05D003643 ORTHO05D005001 1.3e-200 703.4 485 71.1
unitig_32.g11672 Utricularia gibba HOM05D003643 ORTHO05D005001 1.7e-200 703.0 483 72.3
CDE02G0779 Ceratophyllum demersum HOM05D003643 ORTHO05D005001 1.1e-199 700.3 488 71.7
DCAR_007797 Daucus carota HOM05D003643 ORTHO05D005001 5.5e-199 698.0 480 72.5
Manes.01G122000 Manihot esculenta HOM05D003643 ORTHO05D005001 7.2e-199 697.6 504 72.4
MBI07_g18519_MAGBIO Magnolia biondii HOM05D003643 ORTHO05D005001 3.7e-195 685.3 488 71.9
SGA_v2.0_scaffold95G28766 Striga asiatica HOM05D003643 ORTHO05D005001 4.8e-195 684.9 512 69.1
Aa31LG9G17620 Aethionema arabicum HOM05D003643 ORTHO05D005001 1.5e-193 679.9 520 68.3
ATR0743G136 Amborella trichopoda HOM05D003643 ORTHO05D005001 1.1e-191 673.7 492 68.5
Zm00001eb058120 Zea mays HOM05D003643 ORTHO05D005001 7.2e-191 671.0 488 67.0
Hund01937 Selenicereus undatus HOM05D003643 ORTHO05D005001 1.2e-190 670.2 485 68.0
HPP92_015903 Vanilla planifolia HOM05D003643 ORTHO05D005001 1.8e-189 666.4 486 68.5
AUR62017342 Chenopodium quinoa HOM05D003643 ORTHO05D005001 1.5e-188 663.3 585 59.3
Os08g0471900 Oryza sativa ssp. japonica HOM05D003643 ORTHO05D005001 2.0e-188 662.9 490 66.3
PSO675G9021 Papaver somniferum HOM05D003643 ORTHO05D005001 2.0e-188 662.9 507 66.7
EL10Ac5g12673 Beta vulgaris HOM05D003643 ORTHO05D005001 3.3e-188 662.1 568 61.6
TPR.G20778 Trifolium pratense HOM05D003643 ORTHO05D005001 3.1e-186 655.6 488 68.4
Pp3c15_5070 Physcomitrium patens HOM05D003643 ORTHO05D005001 5.0e-184 648.3 495 63.2
Peaxi162Scf00128g01142 Petunia axillaris HOM05D003643 ORTHO05D005001 1.4e-183 646.7 483 69.2
Nitab4.5_0002463g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 4.2e-183 645.2 492 68.3
Lsat_1_v5_gn_2_29841 Lactuca sativa HOM05D003643 ORTHO05D005001 9.4e-183 644.0 494 66.8
TPR.G9485 Trifolium pratense HOM05D003643 ORTHO05D005001 1.6e-182 643.3 464 69.8
Mapoly0085s0072 Marchantia polymorpha HOM05D003643 ORTHO05D005001 1.0e-181 640.6 508 62.8
CSS0005005 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 5.7e-180 634.8 397 78.3
Aqoxy5G01635 Aquilegia oxysepala HOM05D003643 ORTHO05D005001 9.1e-178 627.5 491 63.3
Ca_20206_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 9.1e-178 627.5 484 65.3
Nitab4.5_0004569g0010 Nicotiana tabacum HOM05D003643 ORTHO05D005001 9.1e-170 600.9 507 63.7
QL07p008150 Quercus lobata HOM05D003643 ORTHO05D005001 3.2e-167 592.4 556 59.4
Ciclev10003667m.g Citrus clementina HOM05D003643 ORTHO05D005001 7.0e-162 574.7 380 76.8
SMO203G0021 Selaginella moellendorffii HOM05D003643 ORTHO05D005001 7.0e-162 574.7 457 62.4
CBR_g6566 Chara braunii HOM05D003643 ORTHO05D005001 3.8e-160 568.9 525 56.6
Phvul.003G000226 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.9e-159 566.6 348 80.5
ClCG01G009340 Citrullus lanatus HOM05D003643 ORTHO05D005001 2.6e-156 556.2 361 78.7
CBR_g34896 Chara braunii HOM05D003643 ORTHO05D005001 3.7e-155 552.4 491 58.2
Phvul.002G099300 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.8e-154 550.1 398 73.4
Gohir.1Z049309 Gossypium hirsutum HOM05D003643 ORTHO05D005001 4.1e-154 548.9 357 77.0
PSO017G1140 Papaver somniferum HOM05D003643 ORTHO05D005001 2.8e-150 536.2 398 68.1
Ah.12g057940 Amaranthus hybridus HOM05D003643 ORTHO05D005001 1.1e-141 507.7 397 66.8
BolC8t48076H Brassica oleracea HOM05D003643 ORTHO05D005001 4.9e-139 498.8 369 70.7
Peaxi162Scf00149g01022 Petunia axillaris HOM05D003643 ORTHO05D005001 6.0e-137 491.9 357 70.6
Gohir.1Z049318 Gossypium hirsutum HOM05D003643 ORTHO05D005001 9.9e-132 474.6 305 78.4
Haze_13620 Corylus avellana HOM05D003643 ORTHO05D005001 2.2e-131 473.4 275 85.8
Phvul.L001739 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.0e-128 463.0 405 62.2
CBR_g6568 Chara braunii HOM05D003643 ORTHO05D005001 3.9e-128 462.6 465 52.9
Phvul.003G000304 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.2e-124 451.1 281 79.7
C03p12370 Brassica napus HOM05D003643 ORTHO05D005001 2.4e-122 443.4 301 73.4
Phvul.003G000330 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.2e-122 443.0 272 80.1
Actinidia36045 Actinidia chinensis HOM05D003643 ORTHO05D005001 4.0e-93 346.3 233 73.0
Phvul.003G000278 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.5e-87 327.0 193 82.9
Cfa025656 Carpinus fangiana HOM05D003643 ORTHO05D005001 1.6e-86 324.3 496 39.7
Atru.chr3.103 Acer truncatum HOM05D003643 ORTHO05D005001 1.4e-82 311.2 252 66.3
Phvul.L008901 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.1e-79 301.6 179 83.2
DCAR_017792 Daucus carota HOM05D003643 ORTHO05D005001 3.3e-71 273.5 204 67.6
SEGI_34727 Sequoiadendron giganteum HOM05D003643 ORTHO05D005001 8.5e-67 258.8 200 64.0
BolC8t48075H Brassica oleracea HOM05D003643 ORTHO05D018815 1.8e-56 224.6 135 80.7
Psat3g171960 Pisum sativum HOM05D003643 ORTHO05D005001 7.5e-55 219.2 231 52.8
Lsat_1_v5_gn_5_36361 Lactuca sativa HOM05D003643 ORTHO05D018815 2.8e-54 217.2 154 69.5
ClCG01G009350 Citrullus lanatus HOM05D003643 ORTHO05D005001 1.8e-53 214.5 131 81.7
Psat6g162200 Pisum sativum HOM05D003643 ORTHO05D005001 4.5e-52 209.9 258 46.9
Atru.chr8.2696 Acer truncatum HOM05D003643 ORTHO05D005001 1.3e-51 208.4 263 50.6
Atru.chr8.2585 Acer truncatum HOM05D003643 ORTHO05D005001 5.0e-51 206.5 153 69.9
Peaxi162Scf00149g01017 Petunia axillaris HOM05D003643 ORTHO05D018815 1.2e-49 201.8 141 70.2
CSS0009011 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 1.1e-45 188.7 114 78.9
Phvul.L001639 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 7.2e-42 176.0 99 82.8
Phvul.L008801 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 7.2e-42 176.0 99 82.8
ATR0712G001 Amborella trichopoda HOM05D003643 ORTHO05D023464 8.9e-40 169.1 137 62.8
CSS0015856 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 8.9e-40 169.1 114 71.9
CBR_g12037 Chara braunii HOM05D003643 ORTHO05D005001 1.3e-35 155.2 203 44.8
Haze_13621 Corylus avellana HOM05D003643 ORTHO05D018815 2.9e-30 137.5 77 89.6
Haze_13619 Corylus avellana HOM05D003643 ORTHO05D034905 4.6e-28 130.2 105 67.6
Lsat_1_v5_gn_5_135000 Lactuca sativa HOM05D003643 ORTHO05D005001 2.1e-25 121.3 97 67.0
ClCG01G009330 Citrullus lanatus HOM05D003643 ORTHO05D018815 1.2e-23 115.5 64 85.9
Gohir.A10G145401 Gossypium hirsutum HOM05D003643 ORTHO05D018815 1.5e-23 115.2 63 87.3
Cc11_g00920 Coffea canephora HOM05D003643 ORTHO05D005001 1.7e-22 111.7 67 80.6
CSS0023685 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 3.2e-21 107.5 78 70.5
Psat0s3903g0040 Pisum sativum HOM05D003643 ORTHO05D005001 4.1e-21 107.1 65 84.6
CSS0030804 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 2.1e-20 104.8 65 78.5
CSS0024414 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 1.7e-19 101.7 65 75.4
CSS0049868 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 5.1e-19 100.1 65 73.8
CSS0012788 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 2.3e-16 91.3 77 63.6
Lsat_1_v5_gn_5_54460 Lactuca sativa HOM05D003643 ORTHO05D005001 2.3e-16 91.3 189 36.0
CSS0032340 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 1.0e-11 75.9 46 71.7
HanXRQChr06g0180401 Helianthus annuus HOM05D003643 ORTHO05D005001 1.2e-09 68.9 38 78.9
QL04p096498 Quercus lobata HOM05D000005 ORTHO05D000012 5.8e-07 60.1 57 59.6
RcHm_v2.0_Chr5g0019801 Rosa chinensis HOM05D003643 ORTHO05D005001 7.6e-07 59.7 48 70.8


User provided reference genes

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