Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 3.9e-78 294.7 143 100.0
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 1.6e-55 219.5 120 85.8
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 2.7e-55 218.8 142 73.9
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 2.0e-53 212.6 120 83.3
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 3.3e-53 211.8 133 72.9
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 2.4e-51 205.7 139 71.2
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 5.3e-51 204.5 143 70.6
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 7.0e-51 204.1 143 70.6
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 1.2e-50 203.4 144 68.1
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 1.6e-50 203.0 142 68.3
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 2.7e-50 202.2 143 70.6
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 3.5e-50 201.8 139 73.4
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 3.5e-50 201.8 143 69.2
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 7.7e-50 200.7 137 72.3
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 1.0e-49 200.3 146 69.2
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 1.0e-49 200.3 127 74.8
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 1.7e-49 199.5 129 75.2
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 2.2e-49 199.1 145 70.3
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 2.9e-49 198.7 143 67.1
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 2.9e-49 198.7 141 68.8
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 3.8e-49 198.4 139 72.7
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 5.0e-49 198.0 151 64.2
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 6.5e-49 197.6 145 69.7
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 1.5e-48 196.4 139 71.2
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 1.9e-48 196.1 127 75.6
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 2.5e-48 195.7 123 78.9
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 3.2e-48 195.3 143 66.4
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 3.2e-48 195.3 135 71.1
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 4.2e-48 194.9 135 71.1
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 5.5e-48 194.5 147 67.3
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 5.5e-48 194.5 146 67.1
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 5.5e-48 194.5 135 71.1
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 5.5e-48 194.5 137 72.3
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 7.2e-48 194.1 165 60.6
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 7.2e-48 194.1 135 69.6
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 7.2e-48 194.1 139 69.8
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 1.6e-47 193.0 136 66.9
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 1.6e-47 193.0 135 68.1
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 1.6e-47 193.0 135 68.1
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 1.6e-47 193.0 132 72.7
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 3.6e-47 191.8 132 70.5
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 1.4e-46 189.9 148 65.5
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.3e-46 189.1 135 68.9
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 2.3e-46 189.1 119 76.5
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 3.0e-46 188.7 141 68.8
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 4.0e-46 188.3 136 69.1
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 4.0e-46 188.3 133 69.9
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 4.0e-46 188.3 145 66.9
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 5.2e-46 188.0 145 65.5
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 6.8e-46 187.6 145 66.9
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 1.2e-45 186.8 118 72.0
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 4.4e-45 184.9 119 74.8
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 4.4e-45 184.9 120 75.8
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 7.5e-45 184.1 130 69.2
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 7.5e-45 184.1 135 60.0
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 1.3e-44 183.3 120 75.8
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 2.2e-44 182.6 131 68.7
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 2.8e-44 182.2 138 65.9
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 2.8e-44 182.2 121 74.4
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 4.8e-44 181.4 135 67.4
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 6.3e-44 181.0 145 62.8
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 8.3e-44 180.6 146 60.3
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 1.1e-43 180.3 123 73.2
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 1.1e-43 180.3 134 67.2
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 1.4e-43 179.9 147 66.0
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.8e-43 179.5 120 73.3
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 1.8e-43 179.5 144 59.0
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 3.1e-43 178.7 120 71.7
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 4.1e-43 178.3 120 72.5
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 1.2e-42 176.8 118 68.6
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 1.6e-42 176.4 120 69.2
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 1.6e-42 176.4 129 67.4
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 7.7e-42 174.1 120 70.8
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 7.7e-42 174.1 126 69.8
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 1.0e-41 173.7 132 68.2
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 1.0e-41 173.7 122 74.6
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 1.7e-41 172.9 120 69.2
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 3.8e-41 171.8 127 68.5
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 5.0e-41 171.4 120 66.7
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 1.9e-40 169.5 120 69.2
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 4.2e-40 168.3 124 65.3
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 8.0e-39 164.1 128 60.9
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 3.0e-38 162.2 127 67.7
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 1.2e-37 160.2 122 66.4
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 2.6e-37 159.1 122 66.4
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 6.3e-36 154.5 130 62.3
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 1.4e-35 153.3 123 65.0
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 9.2e-35 150.6 121 62.8
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 1.6e-34 149.8 121 63.6
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 2.0e-34 149.4 121 62.8
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 2.0e-34 149.4 121 62.8
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 2.0e-34 149.4 121 62.8
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 2.0e-34 149.4 121 62.8
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 2.7e-34 149.1 149 51.0
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 3.5e-34 148.7 123 63.4
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 4.5e-34 148.3 121 62.0
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 7.8e-34 147.5 121 61.2
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 1.0e-33 147.1 121 62.0
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 1.0e-33 147.1 121 62.0
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 8.6e-33 144.1 121 60.3
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 4.3e-32 141.7 135 55.6
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 2.2e-28 129.4 138 49.3
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 2.9e-28 129.0 120 59.2
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 2.4e-27 125.9 78 75.6
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 2.4e-27 125.9 121 52.9
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 4.1e-27 125.2 139 48.9
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 7.0e-27 124.4 129 48.8
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 3.3e-24 115.5 71 73.2
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 4.0e-22 108.6 95 61.1
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 6.8e-22 107.8 57 80.7
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 6.6e-17 91.3 50 80.0
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 1.1e-16 90.5 146 34.9
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 2.8e-15 85.9 81 58.0
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 6.8e-14 81.3 109 45.0
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 1.2e-13 80.5 118 39.0


User provided reference genes

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