Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 4.5e-68 261.2 133 100.0
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 6.7e-56 220.7 130 87.7
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 3.4e-52 208.4 130 82.3
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 7.7e-52 207.2 127 82.7
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 7.7e-52 207.2 130 83.8
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 2.9e-51 205.3 130 81.5
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 3.8e-51 204.9 130 82.3
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 8.5e-51 203.8 130 82.3
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 1.2e-49 199.9 130 80.8
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 1.8e-48 196.1 130 78.5
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 9.7e-47 190.3 130 75.4
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 1.1e-45 186.8 130 74.6
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 3.1e-45 185.3 130 73.8
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 3.1e-45 185.3 130 73.8
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 4.1e-45 184.9 130 72.3
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 5.3e-45 184.5 130 72.3
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 5.3e-45 184.5 130 74.6
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 2.0e-44 182.6 131 74.0
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 2.0e-44 182.6 127 72.4
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 2.0e-44 182.6 130 73.1
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 2.6e-44 182.2 130 73.1
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 2.6e-44 182.2 126 75.4
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 2.6e-44 182.2 130 78.5
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 3.5e-44 181.8 130 77.7
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 4.5e-44 181.4 130 73.1
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 1.0e-43 180.3 130 73.1
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.3e-43 179.9 115 79.1
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 1.7e-43 179.5 130 73.1
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 2.2e-43 179.1 126 73.8
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 2.2e-43 179.1 114 79.8
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 2.9e-43 178.7 130 72.3
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 2.9e-43 178.7 130 72.3
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 3.8e-43 178.3 130 76.9
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 5.0e-43 177.9 130 72.3
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 5.0e-43 177.9 130 76.2
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 5.0e-43 177.9 130 74.6
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 6.5e-43 177.6 130 75.4
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 1.1e-42 176.8 128 73.4
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 1.1e-42 176.8 124 74.2
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 1.4e-42 176.4 131 71.8
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 1.4e-42 176.4 130 75.4
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 1.4e-42 176.4 130 71.5
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 3.2e-42 175.3 130 74.6
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 4.2e-42 174.9 130 70.0
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 5.5e-42 174.5 127 73.2
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 7.2e-42 174.1 131 71.8
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 9.4e-42 173.7 131 70.2
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 9.4e-42 173.7 130 72.3
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.6e-41 172.9 112 78.6
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 1.6e-41 172.9 130 66.9
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 2.1e-41 172.6 130 72.3
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.7e-41 172.2 131 69.5
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 2.7e-41 172.2 130 66.2
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 3.6e-41 171.8 130 70.0
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 4.7e-41 171.4 135 69.6
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 4.7e-41 171.4 97 87.6
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 4.7e-41 171.4 130 67.7
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 6.1e-41 171.0 122 73.8
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 6.1e-41 171.0 131 68.7
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 1.8e-40 169.5 100 83.0
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 2.3e-40 169.1 132 68.2
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 3.9e-40 168.3 123 70.7
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 5.2e-40 167.9 133 69.2
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 3.3e-39 165.2 130 65.4
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 5.7e-39 164.5 131 66.4
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 7.4e-39 164.1 130 65.4
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 7.4e-39 164.1 130 67.7
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 1.7e-38 162.9 131 66.4
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 2.2e-38 162.5 130 66.2
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 2.2e-38 162.5 136 64.7
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 2.8e-38 162.2 135 64.4
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 4.8e-38 161.4 136 64.0
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 6.3e-38 161.0 98 81.6
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 6.3e-38 161.0 93 86.0
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 8.2e-38 160.6 111 73.9
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 1.1e-37 160.2 131 64.9
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 1.1e-37 160.2 131 64.9
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 1.1e-37 160.2 132 67.4
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 1.8e-37 159.5 134 64.9
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 1.8e-37 159.5 134 64.9
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 1.8e-37 159.5 130 63.1
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 2.4e-37 159.1 132 65.2
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 5.3e-37 157.9 131 64.9
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 5.3e-37 157.9 130 64.6
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 7.0e-37 157.5 93 83.9
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 1.2e-36 156.8 110 74.5
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 2.0e-36 156.0 89 88.8
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 2.0e-36 156.0 138 65.2
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 2.0e-36 156.0 131 64.9
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 2.6e-36 155.6 136 65.4
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 2.6e-36 155.6 127 66.9
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 3.5e-36 155.2 128 62.5
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 3.5e-36 155.2 132 65.2
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 7.7e-36 154.1 138 63.8
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 1.0e-35 153.7 91 81.3
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 1.3e-35 153.3 127 63.0
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 5.0e-35 151.4 131 62.6
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 5.0e-35 151.4 128 60.9
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 1.5e-34 149.8 90 77.8
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.5e-34 149.1 94 81.9
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 1.4e-32 143.3 88 78.4
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 1.4e-32 143.3 97 74.2
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 5.3e-29 131.3 96 69.8
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 8.0e-25 117.5 102 56.9
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 1.4e-24 116.7 124 54.0
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 3.0e-24 115.5 130 51.5
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 1.3e-22 110.2 76 67.1
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 2.4e-21 105.9 118 51.7
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 6.3e-14 81.3 105 45.7


User provided reference genes

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