Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G098100 Carya illinoinensis HOM05D007196 ORTHO05D009100 4.8e-64 247.7 124 100.0
Cfa008239 Carpinus fangiana HOM05D007196 ORTHO05D009100 2.0e-46 189.1 124 77.4
QL12p039322 Quercus lobata HOM05D007196 ORTHO05D009100 2.2e-40 169.1 150 62.7
Eucgr.K00137 Eucalyptus grandis HOM05D007196 ORTHO05D009100 3.4e-38 161.8 122 68.9
TAR375G0687 Trochodendron aralioides HOM05D007196 ORTHO05D009100 4.5e-38 161.4 124 68.5
Dinv08000 Davidia involucrata HOM05D007196 ORTHO05D009100 2.2e-37 159.1 124 66.1
Thecc.03G163500 Theobroma cacao HOM05D007196 ORTHO05D009100 8.5e-37 157.1 125 67.2
COL.COLO4_14199 Corchorus olitorius HOM05D007196 ORTHO05D009100 1.1e-36 156.8 124 64.5
Cpa.g.sc3.256 Carica papaya HOM05D007196 ORTHO05D009100 2.5e-36 155.6 126 66.7
Duzib068G1365 Durio zibethinus HOM05D007196 ORTHO05D009100 4.2e-36 154.8 125 65.6
Phvul.004G125800 Phaseolus vulgaris HOM05D007196 ORTHO05D009100 5.5e-36 154.5 122 67.2
Glyma.16G203100 Glycine max HOM05D007196 ORTHO05D009100 9.4e-36 153.7 122 65.6
Glyma.09G152100 Glycine max HOM05D007196 ORTHO05D009100 1.2e-35 153.3 122 64.8
Hma1.2p1_0488F.1_g163760 Hydrangea macrophylla HOM05D007196 ORTHO05D009100 2.7e-35 152.1 125 66.4
Lalb_Chr19g0131261 Lupinus albus HOM05D007196 ORTHO05D009100 3.6e-35 151.8 122 64.8
FAN06G4298 Fragaria x ananassa HOM05D007196 ORTHO05D009100 7.9e-35 150.6 128 64.1
RcHm_v2.0_Chr1g0375291 Rosa chinensis HOM05D007196 ORTHO05D009100 7.9e-35 150.6 119 64.7
FAN10G3863 Fragaria x ananassa HOM05D007196 ORTHO05D009100 1.4e-34 149.8 127 63.8
Duzib205G1842 Durio zibethinus HOM05D007196 ORTHO05D009100 2.3e-34 149.1 128 63.3
FAN06G1802 Fragaria x ananassa HOM05D007196 ORTHO05D009100 3.0e-34 148.7 128 64.1
Manes.14G032200 Manihot esculenta HOM05D007196 ORTHO05D009100 3.0e-34 148.7 123 64.2
Ciclev10006560m.g Citrus clementina HOM05D007196 ORTHO05D009100 3.9e-34 148.3 90 80.0
FAN03G0205 Fragaria x ananassa HOM05D007196 ORTHO05D009100 5.1e-34 147.9 127 63.8
Potri.012G130600 Populus trichocarpa HOM05D007196 ORTHO05D009100 6.7e-34 147.5 121 62.0
vmacro06759 Vaccinium macrocarpon HOM05D007196 ORTHO05D009100 8.8e-34 147.1 125 68.0
THA.LOC104811505 Tarenaya hassleriana HOM05D007196 ORTHO05D009100 1.1e-33 146.7 124 65.3
TWI14G0139 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 1.1e-33 146.7 123 61.8
Gohir.D11G007600 Gossypium hirsutum HOM05D007196 ORTHO05D009100 1.5e-33 146.4 124 63.7
Lj2g0025497 Lotus japonicus HOM05D007196 ORTHO05D009100 1.5e-33 146.4 124 62.9
FvH4_7g28320 Fragaria vesca HOM05D007196 ORTHO05D009100 2.0e-33 146.0 127 63.8
Potri.015G132500 Populus trichocarpa HOM05D007196 ORTHO05D009100 2.0e-33 146.0 118 62.7
Sabra12G0098300 Salix brachista HOM05D007196 ORTHO05D009100 2.0e-33 146.0 121 61.2
Gorai.007G009100 Gossypium raimondii HOM05D007196 ORTHO05D009100 3.3e-33 145.2 124 63.7
TWI23G0806 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 3.3e-33 145.2 123 61.0
Prupe.2G283900 Prunus persica HOM05D007196 ORTHO05D009100 4.4e-33 144.8 129 62.8
Actinidia13526 Actinidia chinensis HOM05D007196 ORTHO05D009100 7.4e-33 144.1 122 63.9
Duzib205G0862 Durio zibethinus HOM05D007196 ORTHO05D009100 7.4e-33 144.1 128 61.7
Lsat_1_v5_gn_2_129760 Lactuca sativa HOM05D007196 ORTHO05D009100 7.4e-33 144.1 119 63.9
Rhsim03G0172900 Rhododendron simsii HOM05D007196 ORTHO05D009100 7.4e-33 144.1 125 66.4
ECA238G2893 Erigeron canadensis HOM05D007196 ORTHO05D009100 1.3e-32 143.3 125 66.4
Gohir.A11G008400 Gossypium hirsutum HOM05D007196 ORTHO05D009100 1.3e-32 143.3 124 62.1
AT5G51720 Arabidopsis thaliana HOM05D007196 ORTHO05D009100 2.8e-32 142.1 90 77.8
Atru.chr1.612 Acer truncatum HOM05D007196 ORTHO05D009100 3.7e-32 141.7 125 63.2
HanXRQChr07g0206311 Helianthus annuus HOM05D007196 ORTHO05D009100 4.8e-32 141.4 94 72.3
Carub.0008s1174 Capsella rubella HOM05D007196 ORTHO05D009100 8.2e-32 140.6 85 81.2
MD01G1187500 Malus domestica HOM05D007196 ORTHO05D009100 1.1e-31 140.2 124 59.7
CARHR264580 Cardamine hirsuta HOM05D007196 ORTHO05D009100 1.4e-31 139.8 126 59.5
TPR.G27717 Trifolium pratense HOM05D007196 ORTHO05D009100 2.4e-31 139.0 125 60.8
AL8G25980 Arabidopsis lyrata HOM05D007196 ORTHO05D009100 5.3e-31 137.9 91 73.6
Thhalv10015074m.g Eutrema salsugineum HOM05D007196 ORTHO05D009100 1.2e-30 136.7 87 78.2
PGR142G2119 Punica granatum HOM05D007196 ORTHO05D009100 2.0e-30 136.0 80 81.2
BcaB08g35520 Brassica carinata HOM05D007196 ORTHO05D009100 2.6e-30 135.6 86 76.7
A10p09580 Brassica napus HOM05D007196 ORTHO05D009100 2.6e-30 135.6 86 76.7
BraA10t43033Z Brassica rapa HOM05D007196 ORTHO05D009100 2.6e-30 135.6 86 76.7
MBI12_g21133_MAGBIO Magnolia biondii HOM05D007196 ORTHO05D009100 2.6e-30 135.6 122 63.1
Psat1g109280 Pisum sativum HOM05D007196 ORTHO05D009100 2.6e-30 135.6 125 59.2
GSVIVG01018482001 Vitis vinifera HOM05D007196 ORTHO05D009100 2.6e-30 135.6 103 68.0
BcaC04g20641 Brassica carinata HOM05D007196 ORTHO05D009100 3.5e-30 135.2 86 76.7
C09p41140 Brassica napus HOM05D007196 ORTHO05D009100 3.5e-30 135.2 86 76.7
BolC9t56992H Brassica oleracea HOM05D007196 ORTHO05D009100 3.5e-30 135.2 86 76.7
Sp6g13940 Schrenkiella parvula HOM05D007196 ORTHO05D009100 3.5e-30 135.2 86 75.6
Cc02_g03760 Coffea canephora HOM05D007196 ORTHO05D009100 4.5e-30 134.8 115 60.0
Sed0001882 Sechium edule HOM05D007196 ORTHO05D009100 4.5e-30 134.8 73 86.3
arahy.Tifrunner.gnm1.ann1.S0TT2Y Arachis hypogaea HOM05D007196 ORTHO05D009100 5.9e-30 134.4 82 76.8
CSS0025032 Camellia sinensis var. sinensis HOM05D007196 ORTHO05D009100 5.9e-30 134.4 125 60.8
Nitab4.5_0003984g0020 Nicotiana tabacum HOM05D007196 ORTHO05D009100 5.9e-30 134.4 79 81.0
PSO478G0391 Papaver somniferum HOM05D007196 ORTHO05D009100 5.9e-30 134.4 121 57.0
CANSAT21G1841 Cannabis sativa HOM05D007196 ORTHO05D009100 7.7e-30 134.0 93 72.0
AUR62016084 Chenopodium quinoa HOM05D007196 ORTHO05D009100 7.7e-30 134.0 82 78.0
CsaV3_5G005490 Cucumis sativus L. HOM05D007196 ORTHO05D009100 1.0e-29 133.7 93 72.0
Medtr0050s0180 Medicago truncatula HOM05D007196 ORTHO05D009100 1.0e-29 133.7 125 62.4
Migut.F00414 Erythranthe guttata HOM05D007196 ORTHO05D009100 1.3e-29 133.3 79 77.2
AUR62021293 Chenopodium quinoa HOM05D007196 ORTHO05D009100 1.7e-29 132.9 82 76.8
EL10Ac3g05770 Beta vulgaris HOM05D007196 ORTHO05D009100 2.2e-29 132.5 91 73.6
Solyc03g007030.3 Solanum lycopersicum HOM05D007196 ORTHO05D009100 2.2e-29 132.5 79 78.5
PGSC0003DMG400031014 Solanum tuberosum HOM05D007196 ORTHO05D009100 2.2e-29 132.5 79 78.5
CAN.G1481.5 Capsicum annuum HOM05D007196 ORTHO05D009100 2.9e-29 132.1 97 72.2
MELO3C005405.2 Cucumis melo HOM05D007196 ORTHO05D009100 5.0e-29 131.3 87 73.6
unitig_52.g17755 Utricularia gibba HOM05D007196 ORTHO05D009100 5.0e-29 131.3 126 55.6
Aqoxy7G00560 Aquilegia oxysepala HOM05D007196 ORTHO05D009100 6.5e-29 131.0 123 60.2
Peaxi162Scf00192g00828 Petunia axillaris HOM05D007196 ORTHO05D009100 8.5e-29 130.6 79 78.5
SalBow4G2038 Salvia bowleyana HOM05D007196 ORTHO05D009100 2.5e-28 129.0 93 65.6
Sopen03g003020 Solanum pennellii HOM05D007196 ORTHO05D009100 2.5e-28 129.0 79 75.9
DCAR_018131 Daucus carota HOM05D007196 ORTHO05D009100 4.2e-28 128.3 80 75.0
CDE11G1107 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 5.5e-28 127.9 122 54.9
Zm00001eb320190 Zea mays HOM05D007196 ORTHO05D009100 5.5e-28 127.9 73 79.5
Mapoly0132s0038 Marchantia polymorpha HOM05D007196 ORTHO05D009100 7.2e-28 127.5 85 71.8
ClCG01G005210 Citrullus lanatus HOM05D007196 ORTHO05D009100 1.2e-27 126.7 77 74.0
CDE02G2935 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 2.1e-27 125.9 123 53.7
Os07g0467200 Oryza sativa ssp. japonica HOM05D007196 ORTHO05D009100 2.1e-27 125.9 79 74.7
Cc00_g08970 Coffea canephora HOM05D007196 ORTHO05D009100 2.7e-27 125.6 120 55.8
SEGI_24908 Sequoiadendron giganteum HOM05D007196 ORTHO05D009100 2.7e-27 125.6 76 77.6
HPP92_007351 Vanilla planifolia HOM05D007196 ORTHO05D009100 8.0e-27 124.0 119 58.8
PSO782G2298 Papaver somniferum HOM05D007196 ORTHO05D009100 1.0e-26 123.6 114 57.0
Haze_13814 Corylus avellana HOM05D007196 ORTHO05D009100 2.3e-26 122.5 98 68.4
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 2.3e-26 122.5 81 72.8
AagrBONN_evm.TU.Sc2ySwM_117.3845 Anthoceros agrestis HOM05D007196 ORTHO05D009100 1.3e-24 116.7 62 80.6
Pp3c24_720 Physcomitrium patens HOM05D007196 ORTHO05D009100 6.3e-24 114.4 85 68.2
Pp3c23_14000 Physcomitrium patens HOM05D007196 ORTHO05D009100 1.4e-23 113.2 67 74.6
AUR62023670 Chenopodium quinoa HOM05D007196 ORTHO05D001134 2.9e-21 105.5 71 69.0
CBR_g49669 Chara braunii HOM05D007196 ORTHO05D009100 6.5e-21 104.4 62 72.6
Cre01.g050550 Chlamydomonas reinhardtii HOM05D007196 ORTHO05D009100 6.5e-21 104.4 81 60.5
PGSC0003DMG400019391 Solanum tuberosum HOM05D007196 ORTHO05D009100 4.2e-20 101.7 71 69.0
CAN.G1135.2 Capsicum annuum HOM05D007196 ORTHO05D009100 3.6e-19 98.6 103 57.3
Dinv28524 Davidia involucrata HOM05D007196 ORTHO05D009100 9.8e-17 90.5 91 53.8
Haze_26518 Corylus avellana HOM05D007196 ORTHO05D009100 2.9e-13 79.0 68 48.5
VMungo0464G1496 Vigna mungo HOM05D007196 ORTHO05D009100 5.0e-13 78.2 89 52.8
Nn4g26452 Nelumbo nucifera HOM05D007196 ORTHO05D009100 5.5e-12 74.7 94 50.0
FAN03G1444 Fragaria x ananassa HOM05D000077 ORTHO05D000981 1.2e-11 73.6 93 51.6
Cc05_g04470 Coffea canephora HOM05D007196 ORTHO05D009100 1.7e-08 63.2 28 96.4
ATR0757G208 Amborella trichopoda HOM05D007196 ORTHO05D009100 2.4e-07 59.3 90 45.6


User provided reference genes

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