Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 7.1e-138 493.8 230 100.0
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 3.1e-109 398.7 223 83.0
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 4.8e-102 374.8 227 78.4
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 1.4e-101 373.2 217 76.5
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 3.1e-101 372.1 217 75.6
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 3.4e-100 368.6 217 75.6
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 3.4e-100 368.6 217 75.6
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 3.4e-100 368.6 226 73.5
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 5.9e-100 367.9 226 73.9
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 1.3e-99 366.7 220 72.7
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 1.7e-99 366.3 219 76.3
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 1.1e-98 363.6 215 74.9
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 1.4e-98 363.2 223 72.2
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 1.9e-98 362.8 227 73.1
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 1.6e-97 359.8 217 72.4
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 2.7e-97 359.0 218 73.4
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 4.7e-97 358.2 225 73.3
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 1.8e-96 356.3 225 73.8
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 2.3e-96 355.9 222 73.4
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 3.0e-96 355.5 224 73.7
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 5.1e-96 354.8 221 73.3
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 8.8e-96 354.0 221 74.2
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 2.0e-95 352.8 222 72.1
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 3.3e-95 352.1 230 70.9
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 3.3e-95 352.1 230 72.6
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 4.4e-95 351.7 222 73.4
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 1.7e-94 349.7 224 71.9
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 4.8e-94 348.2 227 70.9
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 6.3e-94 347.8 264 63.3
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 1.1e-93 347.1 226 72.6
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 2.4e-93 345.9 224 72.3
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 7.0e-93 344.4 224 71.9
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 7.0e-93 344.4 227 71.4
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 1.2e-92 343.6 229 71.2
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 2.0e-92 342.8 222 71.2
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 3.5e-92 342.0 221 73.3
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 5.9e-92 341.3 234 70.5
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 2.2e-91 339.3 224 73.2
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 2.2e-91 339.3 242 66.5
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 6.5e-91 337.8 222 70.7
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 8.5e-91 337.4 229 70.7
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 8.5e-91 337.4 227 71.4
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 1.1e-90 337.0 225 69.8
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 2.5e-90 335.9 230 68.3
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 1.2e-89 333.6 222 71.2
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 2.1e-89 332.8 227 67.8
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 2.1e-89 332.8 224 67.0
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 3.6e-89 332.0 222 71.2
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 6.1e-89 331.3 222 68.9
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 3.9e-88 328.6 218 69.3
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 3.9e-88 328.6 226 69.5
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 3.9e-88 328.6 229 68.6
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 5.2e-88 328.2 217 68.7
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 6.7e-88 327.8 217 67.3
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 1.5e-87 326.6 225 67.6
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 4.4e-87 325.1 221 67.4
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 5.7e-87 324.7 222 66.7
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 1.7e-86 323.2 226 68.1
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 2.2e-86 322.8 217 66.8
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 2.2e-86 322.8 217 66.8
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 2.2e-86 322.8 219 66.7
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 2.2e-86 322.8 223 67.7
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 4.8e-86 321.6 217 66.8
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 4.8e-86 321.6 217 66.4
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 1.4e-85 320.1 222 67.6
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 1.8e-85 319.7 231 65.8
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 1.8e-85 319.7 222 67.6
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 2.4e-85 319.3 193 74.1
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 3.1e-85 318.9 216 65.3
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 4.1e-85 318.5 222 65.3
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 2.6e-84 315.8 224 67.4
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 5.9e-84 314.7 189 74.1
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 7.7e-84 314.3 189 74.1
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 1.3e-83 313.5 241 63.1
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 1.3e-83 313.5 221 64.3
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 3.8e-83 312.0 219 64.8
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 3.8e-83 312.0 219 64.8
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 4.2e-82 308.5 236 62.3
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 8.0e-81 304.3 268 57.1
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 8.0e-81 304.3 217 67.7
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 1.0e-80 303.9 297 54.2
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 9.7e-79 297.4 193 73.1
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 8.2e-78 294.3 221 62.4
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 5.0e-75 285.0 197 67.5
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 8.5e-75 284.3 188 70.7
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 1.5e-74 283.5 187 69.5
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 2.5e-74 282.7 190 73.2
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 1.6e-73 280.0 196 69.4
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 3.6e-73 278.9 190 68.9
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 1.4e-72 276.9 201 65.2
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 1.2e-71 273.9 223 60.5
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 2.6e-71 272.7 201 64.7
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 5.7e-71 271.6 187 65.2
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 9.8e-71 270.8 190 68.4
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 9.8e-71 270.8 190 68.4
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 3.7e-70 268.9 183 66.7
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 8.3e-70 267.7 187 63.1
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 1.1e-69 267.3 189 66.7
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 9.1e-69 264.2 183 65.0
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 9.1e-69 264.2 184 64.1
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 2.3e-67 259.6 190 65.8
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 2.3e-67 259.6 230 57.0
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 2.3e-67 259.6 230 57.0
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 2.9e-67 259.2 183 63.4
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 1.9e-66 256.5 225 58.7
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 4.2e-66 255.4 224 58.9
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 7.2e-66 254.6 217 54.8
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 2.0e-63 246.5 187 61.5
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 4.5e-60 235.3 193 58.0
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 1.2e-57 227.3 197 55.3
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 1.4e-56 223.8 216 46.8
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 1.2e-52 210.7 150 67.3
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 3.5e-52 209.1 140 69.3
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 5.8e-47 191.8 133 65.4
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 7.8e-36 154.8 81 77.8
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 1.1e-32 144.4 76 73.7
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 4.5e-15 85.9 190 34.2
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 1.6e-09 67.4 69 42.0
GSVIVG01018488001 Vitis vinifera HOM05D006795 ORTHO05D008573 2.0e-07 60.5 34 73.5


User provided reference genes

Program Settings