Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G093300 Carya illinoinensis HOM05D004547 ORTHO05D005133 0.0e+00 1590.5 840 100.0
QL09p005748 Quercus lobata HOM05D004547 ORTHO05D005133 0.0e+00 1457.2 838 91.4
Cfa008167 Carpinus fangiana HOM05D004547 ORTHO05D005133 0.0e+00 1429.5 840 89.8
Thecc.03G155600 Theobroma cacao HOM05D004547 ORTHO05D005133 0.0e+00 1401.7 839 87.1
Ciclev10004313m.g Citrus clementina HOM05D004547 ORTHO05D005133 0.0e+00 1396.3 840 86.9
Dinv28576 Davidia involucrata HOM05D004547 ORTHO05D005133 0.0e+00 1395.6 839 86.3
Prupe.2G277000 Prunus persica HOM05D004547 ORTHO05D005133 0.0e+00 1395.6 841 86.3
Duzib205G1908 Durio zibethinus HOM05D004547 ORTHO05D005133 0.0e+00 1393.6 839 86.2
Cpa.g.sc3.324 Carica papaya HOM05D004547 ORTHO05D005133 0.0e+00 1389.4 841 85.5
Atru.chr1.728 Acer truncatum HOM05D004547 ORTHO05D005133 0.0e+00 1381.7 840 85.2
Manes.06G134600 Manihot esculenta HOM05D004547 ORTHO05D005133 0.0e+00 1376.7 840 85.7
RcHm_v2.0_Chr1g0374281 Rosa chinensis HOM05D004547 ORTHO05D005133 0.0e+00 1376.7 841 85.5
FAN03G1184 Fragaria x ananassa HOM05D004547 ORTHO05D005133 0.0e+00 1370.1 841 85.4
FvH4_7g27490 Fragaria vesca HOM05D004547 ORTHO05D005133 0.0e+00 1366.3 841 85.3
FAN01G0567 Fragaria x ananassa HOM05D004547 ORTHO05D005133 0.0e+00 1365.5 841 85.1
CSS0028755 Camellia sinensis var. sinensis HOM05D004547 ORTHO05D005133 0.0e+00 1363.6 839 83.7
Actinidia31780 Actinidia chinensis HOM05D004547 ORTHO05D005133 0.0e+00 1363.2 839 83.6
Gorai.008G216000 Gossypium raimondii HOM05D004547 ORTHO05D005133 0.0e+00 1362.8 840 85.4
GSVIVG01018659001 Vitis vinifera HOM05D004547 ORTHO05D005133 0.0e+00 1359.7 840 84.3
Potri.003G109100 Populus trichocarpa HOM05D004547 ORTHO05D005133 0.0e+00 1358.2 839 84.3
Eucgr.A02893 Eucalyptus grandis HOM05D004547 ORTHO05D005133 0.0e+00 1357.4 840 84.0
Gohir.A12G198300 Gossypium hirsutum HOM05D004547 ORTHO05D005133 0.0e+00 1354.7 840 84.5
PGR042G2008 Punica granatum HOM05D004547 ORTHO05D005133 0.0e+00 1352.8 840 83.8
Gohir.D12G200900 Gossypium hirsutum HOM05D004547 ORTHO05D005133 0.0e+00 1352.4 840 84.6
Sed0001089 Sechium edule HOM05D004547 ORTHO05D005133 0.0e+00 1352.4 840 83.5
Glyma.09G224000 Glycine max HOM05D004547 ORTHO05D005133 0.0e+00 1350.9 839 84.5
CANSAT56G3837 Cannabis sativa HOM05D004547 ORTHO05D005133 0.0e+00 1349.3 841 83.8
Hma1.2p1_0432F.1_g151760 Hydrangea macrophylla HOM05D004547 ORTHO05D005133 0.0e+00 1349.3 840 83.5
Glyma.12G013000 Glycine max HOM05D004547 ORTHO05D005133 0.0e+00 1348.6 839 84.1
Lj3g0004511 Lotus japonicus HOM05D004547 ORTHO05D005133 0.0e+00 1348.6 839 84.7
FAN06G1879 Fragaria x ananassa HOM05D004547 ORTHO05D005133 0.0e+00 1345.5 861 82.7
MELO3C006811.2 Cucumis melo HOM05D004547 ORTHO05D005133 0.0e+00 1345.1 840 83.3
Sed0008837 Sechium edule HOM05D004547 ORTHO05D005133 0.0e+00 1343.6 840 83.5
TAR375G0699 Trochodendron aralioides HOM05D004547 ORTHO05D005133 0.0e+00 1343.6 839 83.2
CsaV3_3G016130 Cucumis sativus L. HOM05D004547 ORTHO05D005133 0.0e+00 1343.2 840 83.1
Phvul.011G016000 Phaseolus vulgaris HOM05D004547 ORTHO05D005133 0.0e+00 1342.0 839 83.7
arahy.Tifrunner.gnm1.ann1.TL2CDN Arachis hypogaea HOM05D004547 ORTHO05D005133 0.0e+00 1340.1 839 84.5
THA.LOC104811522 Tarenaya hassleriana HOM05D004547 ORTHO05D005133 0.0e+00 1338.2 841 82.3
VMungo1127G1242 Vigna mungo HOM05D004547 ORTHO05D005133 0.0e+00 1335.9 839 83.6
arahy.Tifrunner.gnm1.ann1.J7T2TK Arachis hypogaea HOM05D004547 ORTHO05D005133 0.0e+00 1333.9 839 84.1
ClCG05G007360 Citrullus lanatus HOM05D004547 ORTHO05D005133 0.0e+00 1330.1 833 83.4
Medtr0004s0490 Medicago truncatula HOM05D004547 ORTHO05D005133 0.0e+00 1327.4 839 82.7
Rhsim03G0167200 Rhododendron simsii HOM05D004547 ORTHO05D005133 0.0e+00 1326.6 840 82.4
Ca_19628_v3 Cicer arietinum L. HOM05D004547 ORTHO05D005133 0.0e+00 1320.8 840 82.6
Sabra03G0075600 Salix brachista HOM05D004547 ORTHO05D005133 0.0e+00 1315.1 932 76.0
Lj1A979T84 Lonicera japonica HOM05D004547 ORTHO05D005133 0.0e+00 1312.0 839 81.0
Carub.0008s1145 Capsella rubella HOM05D004547 ORTHO05D005133 0.0e+00 1311.6 841 80.9
AT5G51430 Arabidopsis thaliana HOM05D004547 ORTHO05D005133 0.0e+00 1310.4 841 80.9
AL8G25720 Arabidopsis lyrata HOM05D004547 ORTHO05D005133 0.0e+00 1309.3 841 80.9
CARHR264160 Cardamine hirsuta HOM05D004547 ORTHO05D005133 0.0e+00 1305.4 841 80.1
Aa31sc202G10 Aethionema arabicum HOM05D004547 ORTHO05D005133 0.0e+00 1305.0 839 79.9
BcaB08g35501 Brassica carinata HOM05D004547 ORTHO05D005133 0.0e+00 1294.3 841 79.8
Cc02_g04280 Coffea canephora HOM05D004547 ORTHO05D005133 0.0e+00 1293.5 847 78.7
Sp6g13590 Schrenkiella parvula HOM05D004547 ORTHO05D005133 0.0e+00 1293.5 841 79.4
Lalb_Chr03g0024271 Lupinus albus HOM05D004547 ORTHO05D005133 0.0e+00 1293.1 839 81.3
Thhalv10012691m.g Eutrema salsugineum HOM05D004547 ORTHO05D005133 0.0e+00 1291.6 841 80.1
Oeu022486.1 Olea europaea HOM05D004547 ORTHO05D005133 0.0e+00 1283.1 840 78.7
PGSC0003DMG400017618 Solanum tuberosum HOM05D004547 ORTHO05D005133 0.0e+00 1281.9 840 78.5
BcaC04g20676 Brassica carinata HOM05D004547 ORTHO05D005133 0.0e+00 1280.8 841 79.2
A02p12350 Brassica napus HOM05D004547 ORTHO05D005133 0.0e+00 1280.8 842 79.5
BraA10t43010Z Brassica rapa HOM05D004547 ORTHO05D005133 0.0e+00 1279.2 842 79.2
TWI39G0203 Tripterygium wilfordii HOM05D004547 ORTHO05D005133 0.0e+00 1279.2 840 80.6
Nn1g01023 Nelumbo nucifera HOM05D004547 ORTHO05D005133 0.0e+00 1278.5 839 79.0
A10p09340 Brassica napus HOM05D004547 ORTHO05D005133 0.0e+00 1276.5 842 79.3
C09p40720 Brassica napus HOM05D004547 ORTHO05D005133 0.0e+00 1276.2 842 79.1
C02p20480 Brassica napus HOM05D004547 ORTHO05D005133 0.0e+00 1275.0 841 78.6
BolC9t56951H Brassica oleracea HOM05D004547 ORTHO05D005133 0.0e+00 1275.0 842 79.0
Migut.F00479 Erythranthe guttata HOM05D004547 ORTHO05D005133 0.0e+00 1273.8 840 77.4
Medtr6g005610 Medicago truncatula HOM05D004547 ORTHO05D005133 0.0e+00 1271.9 839 79.7
Aqoxy2G03231 Aquilegia oxysepala HOM05D004547 ORTHO05D005133 0.0e+00 1270.8 841 79.0
Sopen05g002910 Solanum pennellii HOM05D004547 ORTHO05D005133 0.0e+00 1270.4 840 77.6
Peaxi162Scf00023g01214 Petunia axillaris HOM05D004547 ORTHO05D005133 0.0e+00 1264.2 844 78.1
Sc14g0005530 Simmondsia chinensis HOM05D004547 ORTHO05D005133 0.0e+00 1262.7 839 78.5
HanXRQChr16g0512771 Helianthus annuus HOM05D004547 ORTHO05D005133 0.0e+00 1257.3 840 78.0
EL10Ac2g04890 Beta vulgaris HOM05D004547 ORTHO05D005133 0.0e+00 1256.9 842 77.6
MSTRG.8826 Avicennia marina HOM05D004547 ORTHO05D005133 0.0e+00 1253.8 840 77.1
SalBow5G5604 Salvia bowleyana HOM05D004547 ORTHO05D005133 0.0e+00 1253.4 857 75.7
SalBow5G1900 Salvia bowleyana HOM05D004547 ORTHO05D005133 0.0e+00 1252.7 857 75.7
PSO266G0090 Papaver somniferum HOM05D004547 ORTHO05D005133 0.0e+00 1251.1 853 78.0
Nitab4.5_0004665g0060 Nicotiana tabacum HOM05D004547 ORTHO05D005133 0.0e+00 1250.0 841 76.9
ECA232G2122 Erigeron canadensis HOM05D004547 ORTHO05D005133 0.0e+00 1245.0 840 76.8
Lsat_1_v5_gn_9_52061 Lactuca sativa HOM05D004547 ORTHO05D005133 0.0e+00 1242.3 840 77.4
PSO384G4058 Papaver somniferum HOM05D004547 ORTHO05D005133 0.0e+00 1242.3 853 77.6
CAN.G16.15 Capsicum annuum HOM05D004547 ORTHO05D005133 0.0e+00 1230.3 840 75.4
Ah.10g036230 Amaranthus hybridus HOM05D004547 ORTHO05D005133 0.0e+00 1224.9 839 75.3
DCAR_020189 Daucus carota HOM05D004547 ORTHO05D005133 0.0e+00 1220.3 841 76.0
Hund13892 Selenicereus undatus HOM05D004547 ORTHO05D005133 0.0e+00 1215.3 809 78.5
MD01G1182800 Malus domestica HOM05D004547 ORTHO05D005133 0.0e+00 1212.2 725 86.8
ATR0317G078 Amborella trichopoda HOM05D004547 ORTHO05D005133 0.0e+00 1207.2 843 74.4
TPR.G20262 Trifolium pratense HOM05D004547 ORTHO05D005133 0.0e+00 1207.2 841 77.2
TAR374G0871 Trochodendron aralioides HOM05D004547 ORTHO05D005133 0.0e+00 1201.8 744 83.2
vmacro06799 Vaccinium macrocarpon HOM05D004547 ORTHO05D005133 0.0e+00 1201.8 865 75.8
AUR62022938 Chenopodium quinoa HOM05D004547 ORTHO05D005133 0.0e+00 1192.9 857 73.5
AUR62012299 Chenopodium quinoa HOM05D004547 ORTHO05D005133 0.0e+00 1181.4 839 74.0
SGA_v2.0_scaffold44G16547 Striga asiatica HOM05D004547 ORTHO05D005133 0.0e+00 1172.9 1000 64.2
unitig_37.g11930 Utricularia gibba HOM05D004547 ORTHO05D005133 0.0e+00 1126.3 841 69.2
Medtr6g005670 Medicago truncatula HOM05D004547 ORTHO05D005133 0.0e+00 1082.4 838 70.9
Psat0s2825g0040 Pisum sativum HOM05D004547 ORTHO05D005133 1.1e-311 1072.8 684 81.0
Zm00001eb389950 Zea mays HOM05D004547 ORTHO05D005133 1.2e-296 1023.1 724 72.1
Mapoly0007s0274 Marchantia polymorpha HOM05D004547 ORTHO05D005133 5.6e-257 891.3 858 56.2
Pp3c7_60 Physcomitrium patens HOM05D004547 ORTHO05D005133 2.5e-249 865.9 864 55.2
Hma1.2p1_0432F.1_g151750 Hydrangea macrophylla HOM05D004547 ORTHO05D005133 1.0e-242 844.0 522 82.8
CARHR150020 Cardamine hirsuta HOM05D004547 ORTHO05D005133 3.4e-238 828.9 609 71.3
BcaC03g14608 Brassica carinata HOM05D004547 ORTHO05D005133 1.7e-237 826.6 547 77.9
Nitab4.5_0000895g0220 Nicotiana tabacum HOM05D004547 ORTHO05D005133 9.6e-233 810.8 545 75.6
SMO134G0015 Selaginella moellendorffii HOM05D004547 ORTHO05D005133 1.4e-231 807.0 843 52.8
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 4.3e-225 785.4 750 56.8
HPP92_005319 Vanilla planifolia HOM05D004547 ORTHO05D005133 4.8e-224 781.9 617 68.9
FAN06G1216 Fragaria x ananassa HOM05D004547 ORTHO05D005133 2.1e-219 766.5 512 80.3
COL.COLO4_14121 Corchorus olitorius HOM05D004547 ORTHO05D005133 6.7e-202 708.4 428 87.6
MD07G1253600 Malus domestica HOM05D004547 ORTHO05D005133 1.6e-195 687.2 447 82.3
CBR_g31542 Chara braunii HOM05D004547 ORTHO05D005133 4.1e-191 672.5 901 44.1
CDE04G0004 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 4.5e-190 669.1 565 64.6
FAN10G1756 Fragaria x ananassa HOM05D004547 ORTHO05D005133 4.4e-177 625.9 449 75.7
COL.COLO4_14122 Corchorus olitorius HOM05D004547 ORTHO05D005133 3.4e-161 573.2 343 84.8
Solyc05g006950.4 Solanum lycopersicum HOM05D004547 ORTHO05D005133 3.5e-158 563.1 400 72.2
HPP92_005328 Vanilla planifolia HOM05D004547 ORTHO05D005133 2.3e-149 533.9 382 74.1
CDE04G0650 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 1.2e-126 458.4 375 66.9
SHI14003 Sapria himalayana HOM05D004547 ORTHO05D000023 1.2e-123 448.4 341 68.9
BraA02t06300Z Brassica rapa HOM05D004547 ORTHO05D005133 2.0e-121 441.0 293 80.2
Oeu042559.1 Olea europaea HOM05D004547 ORTHO05D005133 5.8e-113 412.9 428 55.8
A10p09160 Brassica napus HOM05D004547 ORTHO05D005133 3.1e-106 390.6 235 82.1
BolC2t08183H Brassica oleracea HOM05D004547 ORTHO05D005133 1.2e-105 388.7 235 81.7
Nitab4.5_0019601g0010 Nicotiana tabacum HOM05D004547 ORTHO05D005133 6.0e-102 376.3 267 75.3
PRCOL_00005609 Prasinoderma coloniale HOM05D004547 ORTHO05D005133 6.9e-98 362.8 865 31.6
SEGI_24302 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 3.8e-80 303.9 211 73.0
Cre02.g086700 Chlamydomonas reinhardtii HOM05D004547 ORTHO05D005133 9.4e-71 272.7 861 27.3
SEGI_05738 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 4.7e-70 270.4 230 65.2
CDE04G2539 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 1.6e-65 255.4 269 53.9
HPP92_005318 Vanilla planifolia HOM05D004547 ORTHO05D005133 3.0e-61 241.1 289 48.4
SEGI_08321 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 4.0e-61 240.7 200 63.5
Os06g0669600 Oryza sativa ssp. japonica HOM05D004547 ORTHO05D005133 3.3e-60 237.7 179 71.5
QL10p003704 Quercus lobata HOM05D004547 ORTHO05D005133 5.9e-57 226.9 209 67.0
Actinidia24695 Actinidia chinensis HOM05D004547 ORTHO05D005133 1.7e-51 208.8 130 76.9
A10p09220 Brassica napus HOM05D004547 ORTHO05D005133 2.9e-48 198.0 122 78.7
TPR.G196 Trifolium pratense HOM05D004547 ORTHO05D005133 2.1e-46 191.8 127 79.5
MD07G1253700 Malus domestica HOM05D004547 ORTHO05D005133 2.2e-43 181.8 105 91.4
BraA10t43007Z Brassica rapa HOM05D004547 ORTHO05D005133 7.8e-41 173.3 104 80.8
BraA10t42999Z Brassica rapa HOM05D004547 ORTHO05D005133 1.1e-39 169.5 104 78.8
BraA10t43002Z Brassica rapa HOM05D004547 ORTHO05D005133 5.2e-37 160.6 96 79.2
A10p09300 Brassica napus HOM05D004547 ORTHO05D005133 6.8e-37 160.2 96 81.2
TAR082G0001 Trochodendron aralioides HOM05D004547 ORTHO05D005133 1.2e-33 149.4 97 77.3
CAN.G74.49 Capsicum annuum HOM05D004547 ORTHO05D005133 4.6e-33 147.5 233 41.2
Sc14g0005510 Simmondsia chinensis HOM05D004547 ORTHO05D005133 4.6e-33 147.5 95 77.9
Psat7g163200 Pisum sativum HOM05D004547 ORTHO05D005133 3.9e-32 144.4 130 57.7
SEGI_13446 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 1.4e-29 136.0 112 66.1
Actinidia01052 Actinidia chinensis HOM05D004547 ORTHO05D005133 7.0e-26 123.6 95 67.4
CAN.G280.11 Capsicum annuum HOM05D004547 ORTHO05D005133 9.2e-26 123.2 216 39.4
FvH4_7g19100 Fragaria vesca HOM05D004547 ORTHO05D005133 1.6e-25 122.5 87 80.5
GSVIVG01036042001 Vitis vinifera HOM05D004547 ORTHO05D005133 5.0e-24 117.5 142 49.3
CAN.G903.1 Capsicum annuum HOM05D004547 ORTHO05D005133 7.3e-23 113.6 246 35.0
Nitab4.5_0004558g0010 Nicotiana tabacum HOM05D004547 ORTHO05D016189 2.1e-22 112.1 216 36.1
CAN.G689.6 Capsicum annuum HOM05D004547 ORTHO05D005133 1.8e-21 109.0 87 66.7
Duzib147G0620 Durio zibethinus HOM05D004547 ORTHO05D005133 1.4e-18 99.4 92 64.1
FAN06G3837 Fragaria x ananassa HOM05D004547 ORTHO05D005133 4.1e-18 97.8 72 76.4
SEGI_29591 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 5.4e-18 97.4 114 41.2
Haze_23095 Corylus avellana HOM05D001506 ORTHO05D000455 3.5e-17 94.7 133 50.4
Nitab4.5_0011021g0010 Nicotiana tabacum HOM05D001522 ORTHO05D016189 1.7e-11 75.9 158 36.7
CAN.G118.7 Capsicum annuum HOM05D004547 ORTHO05D005133 2.4e-10 72.0 67 59.7
CAN.G689.5 Capsicum annuum HOM05D004547 ORTHO05D005133 3.2e-10 71.6 61 62.3
Pp3c11_26770 Physcomitrium patens HOM05D004547 ORTHO05D005133 1.3e-08 66.2 83 44.6


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