Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G093100 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.6e-94 348.2 219 100.0
CiPaw.14G108500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.1e-90 337.0 219 97.3
CiPaw.07G048000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.4e-90 335.9 219 96.8
CiPaw.01G283500 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.1e-90 335.5 219 96.8
CiPaw.11G197100 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.1e-90 335.5 219 96.8
CiPaw.14G029000 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.2e-86 323.6 219 95.0
CiPaw.15G067200 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.5e-86 322.0 219 94.5
CiPaw.11G189100 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.9e-81 303.9 219 81.3
CiPaw.01G092600 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.1e-79 297.7 215 89.8
CiPaw.02G050500 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.6e-75 285.4 218 72.5
CiPaw.09G151300 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.6e-75 285.4 218 71.1
CiPaw.12G101800 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.2e-75 284.6 219 84.0
CiPaw.12G041600 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.6e-73 279.3 218 69.3
CiPaw.04G080400 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.7e-70 269.2 218 71.6
CiPaw.14G031000 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.6e-70 268.5 218 72.0
CiPaw.01G146900 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.7e-69 264.6 219 82.2
CiPaw.07G073800 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.9e-68 263.1 195 87.2
CiPaw.02G091600 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.3e-68 262.3 219 80.4
CiPaw.03G043000 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.3e-68 261.9 219 80.8
CiPaw.07G052000 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.3e-68 261.9 219 80.8
CiPaw.08G044500 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.3e-68 261.9 219 80.8
CiPaw.10G012800 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.3e-68 261.9 219 80.8
CiPaw.09G172800 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.7e-67 258.8 214 71.0
CiPaw.01G075100 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.8e-67 258.5 218 70.2
CiPaw.07G149700 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.1e-66 257.3 204 84.3
CiPaw.14G032000 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.8e-66 256.5 218 69.7
CiPaw.10G115900 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.4e-66 256.1 199 85.9
CiPaw.15G027200 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.4e-64 247.7 220 70.5
CiPaw.01G118700 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.0e-62 241.5 142 86.6
CiPaw.14G077500 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.9e-62 241.1 209 80.4
CiPaw.14G061500 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.7e-61 237.7 219 68.5
CiPaw.04G176500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.1e-59 233.0 200 71.0
CiPaw.08G047300 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.1e-59 233.0 143 84.6
CiPaw.12G006100 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.4e-58 229.6 218 68.8
CiPaw.10G044700 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.7e-56 223.4 197 68.0
CiPaw.13G129900 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.3e-55 217.6 227 70.5
CiPaw.01G097200 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.3e-53 213.8 188 71.8
CiPaw.05G100200 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.7e-53 211.5 204 64.2
CiPaw.14G018900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.4e-50 203.8 204 62.3
CiPaw.16G047100 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.4e-50 203.8 219 71.2
CiPaw.01G183400 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.6e-49 199.5 115 85.2
CiPaw.01G240000 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.7e-48 196.8 141 74.5
CiPaw.03G134500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.6e-46 190.3 216 62.5
HanXRQChr08g0232381 Helianthus annuus HOM05D001576 ORTHO05D000401 8.8e-45 184.5 226 61.5
CiPaw.14G032300 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.3e-43 178.3 225 62.2
CiPaw.01G084700 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.3e-40 170.6 165 65.5
CiPaw.12G107800 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.1e-39 167.5 218 53.2
CiPaw.03G224700 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.5e-39 166.4 139 65.5
CiPaw.03G088100 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.2e-39 164.9 143 65.7
CiPaw.01G001000 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.1e-38 161.8 97 81.4
CiPaw.08G115400 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.1e-38 161.8 85 88.2
CiPaw.03G201300 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.0e-34 148.3 167 75.4
CiPaw.03G172800 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.8e-32 142.5 150 80.7
CiPaw.07G134100 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.5e-31 140.6 215 51.2
CiPaw.12G041400 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.2e-31 139.0 227 55.1
CiPaw.07G120000 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.7e-27 125.9 218 49.1
CiPaw.15G139500 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.5e-25 119.0 201 52.2
CiPaw.12G038500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.0e-21 107.8 208 52.9
CiPaw.07G108700 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.0e-16 91.3 197 50.8
QL04p003192 Quercus lobata HOM05D001576 ORTHO05D000401 1.5e-12 77.4 214 35.5
QL04p000022 Quercus lobata HOM05D001576 ORTHO05D000401 2.0e-12 77.0 214 36.0
CiPaw.15G072000 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.5e-12 75.1 95 53.7
CiPaw.01G000900 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.2e-11 73.6 90 77.8
TWI73G0420 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.2e-11 73.6 87 43.7
Hma1.2p1_0324F.1_g125640 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 3.7e-11 72.8 214 29.0
CSS0015368 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.1e-10 71.2 216 38.0
CSS0050513 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.1e-10 71.2 216 36.1
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.8e-10 70.5 216 38.0
CSS0005302 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.4e-10 70.1 216 38.0
CSS0014799 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.4e-10 70.1 216 38.0
QL11p028487 Quercus lobata HOM05D001576 ORTHO05D000401 2.4e-10 70.1 208 39.9
HanXRQChr04g0120511 Helianthus annuus HOM05D001576 ORTHO05D000401 3.1e-10 69.7 73 52.1
QL02p009469 Quercus lobata HOM05D001576 ORTHO05D000401 3.1e-10 69.7 216 25.0
RcHm_v2.0_Chr2g0105031 Rosa chinensis HOM05D001576 ORTHO05D010219 1.2e-09 67.8 210 30.0
RcHm_v2.0_Chr7g0231991 Rosa chinensis HOM05D001576 ORTHO05D010219 1.2e-09 67.8 210 30.0
QL09p040841 Quercus lobata HOM05D001576 ORTHO05D000401 2.0e-09 67.0 213 27.2
CSS0038450 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 7.8e-09 65.1 145 35.9
CiPaw.02G030800 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.7e-08 63.9 221 34.4
CiPaw.15G037700 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.7e-08 63.9 221 35.3
CiPaw.01G307400 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.9e-08 63.2 221 35.3
CiPaw.08G134700 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.9e-08 63.2 221 35.3
QL03p071586 Quercus lobata HOM05D001576 ORTHO05D000401 3.8e-08 62.8 209 28.7
Rhsim12G0031800 Rhododendron simsii HOM05D001576 ORTHO05D000401 3.8e-08 62.8 224 27.2
CiPaw.09G133100 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.1e-07 61.2 221 41.2
Haze_16404 Corylus avellana HOM05D020928 ORTHO05D024875 1.1e-07 61.2 127 30.7
Rhsim05G0091700 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.5e-07 60.8 207 28.0
Rhsim05G0092900 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.5e-07 60.8 207 28.0
TWI18G0820 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.5e-07 60.1 149 33.6
CiPaw.14G060500 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.3e-07 59.7 221 34.4
QL05p011416 Quercus lobata HOM05D001576 ORTHO05D016378 3.3e-07 59.7 223 33.2
TWI53G0679 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 4.3e-07 59.3 213 30.0
CiPaw.08G157400 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.6e-07 58.9 132 31.8
TWI12G0266 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 7.3e-07 58.5 148 30.4
Prupe.1G172500 Prunus persica HOM05D001576 ORTHO05D000401 9.5e-07 58.2 83 44.6
QL10p048988 Quercus lobata HOM05D001576 ORTHO05D000401 9.5e-07 58.2 209 27.8
Ciclev10003979m.g Citrus clementina HOM05D001576 ORTHO05D000401 1.2e-06 57.8 215 31.6
Hma1.2p1_1313F.1_g274940 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 1.2e-06 57.8 85 41.2
TWI36G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.2e-06 57.8 215 25.1
Ciclev10017471m.g Citrus clementina HOM05D001576 ORTHO05D000401 1.6e-06 57.4 115 30.4
Haze_05842 Corylus avellana HOM05D001081 ORTHO05D003320 1.6e-06 57.4 220 26.4
Prupe.1G279700 Prunus persica HOM05D001576 ORTHO05D000401 1.6e-06 57.4 80 38.8
Prupe.2G026400 Prunus persica HOM05D001576 ORTHO05D000401 1.6e-06 57.4 80 38.8
TWI74G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.6e-06 57.4 215 25.1
Rhsim08G0180400 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.1e-06 57.0 212 26.9
TWI36G0193 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.8e-06 56.6 144 29.2
HanXRQChr03g0084901 Helianthus annuus HOM05D000555 ORTHO05D000646 3.6e-06 56.2 92 77.2
Rhsim07G0066400 Rhododendron simsii HOM05D001576 ORTHO05D000401 3.6e-06 56.2 217 28.6
RhsimUnG0111600 Rhododendron simsii HOM05D001576 ORTHO05D000401 3.6e-06 56.2 217 28.6
vmacro13746 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 4.7e-06 55.8 228 27.6
vmacro22863 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 4.7e-06 55.8 228 27.6
CiPaw.01G121200 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.0e-06 55.1 132 30.3
TWI12G1451 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 8.0e-06 55.1 144 29.9
TWI31G0938 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 8.0e-06 55.1 221 29.4


User provided reference genes

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