Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G089900 Carya illinoinensis HOM05D007842 ORTHO05D009661 8.8e-69 263.5 130 100.0
Cfa007650 Carpinus fangiana HOM05D007842 ORTHO05D009661 2.8e-30 135.6 113 60.2
CiPaw.04G057000 Carya illinoinensis HOM05D007842 ORTHO05D009661 8.1e-30 134.0 119 58.0
QL01p044511 Quercus lobata HOM05D007842 ORTHO05D009661 2.7e-25 119.0 121 52.1
Thecc.02G358800 Theobroma cacao HOM05D007842 ORTHO05D009661 1.4e-18 96.7 115 45.2
Manes.14G099200 Manihot esculenta HOM05D007842 ORTHO05D009661 3.2e-18 95.5 106 43.4
COL.COLO4_07888 Corchorus olitorius HOM05D007842 ORTHO05D009661 4.2e-18 95.1 121 44.6
Potri.010G127900 Populus trichocarpa HOM05D007842 ORTHO05D009661 9.2e-18 94.0 112 46.4
Sabra10G0097200 Salix brachista HOM05D007842 ORTHO05D009661 9.2e-18 94.0 136 41.9
Dinv21114 Davidia involucrata HOM05D007842 ORTHO05D009661 1.2e-17 93.6 127 43.3
Actinidia14866 Actinidia chinensis HOM05D007842 ORTHO05D009661 4.6e-17 91.7 119 46.2
Haze_14444 Corylus avellana HOM05D007842 ORTHO05D009661 1.7e-16 89.7 85 58.8
Potri.009G097500 Populus trichocarpa HOM05D007842 ORTHO05D009661 5.1e-16 88.2 124 43.5
Manes.14G099300 Manihot esculenta HOM05D007842 ORTHO05D009661 1.1e-15 87.0 120 44.2
Hma1.2p1_0030F.1_g018270 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 1.5e-15 86.7 115 39.1
Actinidia16632 Actinidia chinensis HOM05D007842 ORTHO05D009661 1.9e-15 86.3 120 43.3
Rhsim09G0110600 Rhododendron simsii HOM05D007842 ORTHO05D009661 9.6e-15 84.0 114 43.0
TWI31G1443 Tripterygium wilfordii HOM05D007842 ORTHO05D009661 9.6e-15 84.0 123 42.3
Gohir.A12G169100 Gossypium hirsutum HOM05D007842 ORTHO05D009661 1.6e-14 83.2 125 37.6
Prupe.1G307400 Prunus persica HOM05D007842 ORTHO05D009661 3.6e-14 82.0 109 45.9
Actinidia04615 Actinidia chinensis HOM05D007842 ORTHO05D009661 6.2e-14 81.3 129 40.3
SGA_v2.0_scaffold124G33571 Striga asiatica HOM05D007842 ORTHO05D009661 8.1e-14 80.9 92 47.8
SalBow8G3786 Salvia bowleyana HOM05D007842 ORTHO05D009661 1.1e-13 80.5 105 37.1
DCAR_007231 Daucus carota HOM05D007842 ORTHO05D009661 1.8e-13 79.7 120 40.8
Manes.06G070800 Manihot esculenta HOM05D007842 ORTHO05D009661 1.8e-13 79.7 95 44.2
Hma1.2p1_0030F.1_g018290 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 2.4e-13 79.3 108 44.4
SalBow8G5078 Salvia bowleyana HOM05D007842 ORTHO05D009661 2.4e-13 79.3 105 37.1
Actinidia38383 Actinidia chinensis HOM05D007842 ORTHO05D009661 5.3e-13 78.2 122 40.2
TPR.G26298 Trifolium pratense HOM05D007842 ORTHO05D009661 5.3e-13 78.2 106 38.7
Eucgr.B03033 Eucalyptus grandis HOM05D007842 ORTHO05D009661 6.9e-13 77.8 107 43.0
Glyma.10G276000 Glycine max HOM05D007842 ORTHO05D009661 6.9e-13 77.8 105 41.0
Oeu004600.1 Olea europaea HOM05D007842 ORTHO05D009661 6.9e-13 77.8 121 34.7
Migut.L01087 Erythranthe guttata HOM05D007842 ORTHO05D009661 1.2e-12 77.0 117 39.3
Lj2g0000320 Lotus japonicus HOM05D007842 ORTHO05D009661 1.2e-12 77.0 106 41.5
VMungo0720G1629 Vigna mungo HOM05D007842 ORTHO05D009661 3.4e-12 75.5 110 39.1
Phvul.007G025600 Phaseolus vulgaris HOM05D007842 ORTHO05D009661 7.6e-12 74.3 107 39.3
Oeu041893.1 Olea europaea HOM05D007842 ORTHO05D009661 9.9e-12 73.9 108 42.6
Glyma.20G113700 Glycine max HOM05D007842 ORTHO05D009661 1.3e-11 73.6 122 35.2
TAR629G0634 Trochodendron aralioides HOM05D000414 ORTHO05D000276 2.9e-11 72.4 108 40.7
Gorai.008G184900 Gossypium raimondii HOM05D007842 ORTHO05D009661 3.8e-11 72.0 127 35.4
Medtr1g111300 Medicago truncatula HOM05D007842 ORTHO05D009661 4.9e-11 71.6 135 35.6
MSTRG.7679 Avicennia marina HOM05D007842 ORTHO05D009661 6.4e-11 71.2 109 35.8
Gohir.D12G172400 Gossypium hirsutum HOM05D007842 ORTHO05D009661 1.1e-10 70.5 127 37.0
Lj5g0000394 Lotus japonicus HOM05D007842 ORTHO05D009661 1.4e-10 70.1 124 39.5
Lsat_1_v5_gn_4_18840 Lactuca sativa HOM05D007842 ORTHO05D009661 1.9e-10 69.7 127 35.4
Actinidia13668 Actinidia chinensis HOM05D007842 ORTHO05D009661 2.4e-10 69.3 135 35.6
TAR371G0248 Trochodendron aralioides HOM05D007842 ORTHO05D009661 5.4e-10 68.2 125 38.4
Peaxi162Scf00380g00818 Petunia axillaris HOM05D007842 ORTHO05D009661 7.1e-10 67.8 106 35.8
Sopen05g005460 Solanum pennellii HOM05D007842 ORTHO05D009661 1.6e-09 66.6 115 36.5
CsaV3_5G034090 Cucumis sativus L. HOM05D030371 ORTHO05D009661 3.5e-09 65.5 129 38.0
Solyc05g009650.4 Solanum lycopersicum HOM05D007842 ORTHO05D009661 3.5e-09 65.5 115 36.5
Lsat_1_v5_gn_4_18760 Lactuca sativa HOM05D007842 ORTHO05D009661 4.6e-09 65.1 101 37.6
Lsat_1_v5_gn_4_18800 Lactuca sativa HOM05D007842 ORTHO05D009661 4.6e-09 65.1 111 36.0
Lalb_Chr17g0342001 Lupinus albus HOM05D007842 ORTHO05D009661 4.6e-09 65.1 90 42.2
Atru.chr11.1326 Acer truncatum HOM05D007842 ORTHO05D009661 7.8e-09 64.3 54 53.7
RcHm_v2.0_Chr4g0435601 Rosa chinensis HOM05D022909 ORTHO05D009661 7.8e-09 64.3 114 39.5
SalBow8G0003 Salvia bowleyana HOM05D007842 ORTHO05D009661 1.3e-08 63.5 100 37.0
Lsat_1_v5_gn_4_18820 Lactuca sativa HOM05D007842 ORTHO05D009661 1.7e-08 63.2 104 33.7
Lalb_Chr10g0099891 Lupinus albus HOM05D007842 ORTHO05D009661 1.7e-08 63.2 96 41.7
MSTRG.13511 Avicennia marina HOM05D007842 ORTHO05D009661 2.3e-08 62.8 101 33.7
Gohir.A13G053568 Gossypium hirsutum HOM05D007842 ORTHO05D009661 3.0e-08 62.4 128 32.8
Sed0016132 Sechium edule HOM05D030371 ORTHO05D009661 3.0e-08 62.4 126 36.5
Phvul.003G028900 Phaseolus vulgaris HOM05D007842 ORTHO05D009661 3.9e-08 62.0 93 41.9
Manes.06G070700 Manihot esculenta HOM05D007842 ORTHO05D009661 5.1e-08 61.6 131 35.9
Gohir.D13G070950 Gossypium hirsutum HOM05D007842 ORTHO05D009661 8.7e-08 60.8 119 33.6
Oeu044385.1 Olea europaea HOM05D007842 ORTHO05D009661 8.7e-08 60.8 49 53.1
DCAR_023676 Daucus carota HOM05D007842 ORTHO05D009661 1.1e-07 60.5 102 38.2
ECA246G3435 Erigeron canadensis HOM05D007842 ORTHO05D009661 1.1e-07 60.5 102 38.2
Glyma.02G097800 Glycine max HOM05D007842 ORTHO05D009661 1.5e-07 60.1 97 38.1
Lsat_1_v5_gn_4_18860 Lactuca sativa HOM05D007842 ORTHO05D009661 1.3e-06 57.0 102 34.3
Nitab4.5_0003642g0020 Nicotiana tabacum HOM05D007842 ORTHO05D009661 4.8e-06 55.1 120 31.7


User provided reference genes

Program Settings