Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 3.0e-105 385.2 192 100.0
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 1.4e-78 296.6 184 79.9
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 1.3e-76 290.0 186 78.0
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 2.9e-76 288.9 191 77.0
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 2.9e-76 288.9 186 78.0
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 3.2e-75 285.4 186 77.4
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 3.2e-75 285.4 187 77.0
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 4.2e-75 285.0 187 74.3
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 2.1e-74 282.7 186 76.3
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 1.0e-73 280.4 182 75.3
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 5.1e-73 278.1 171 79.5
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 6.7e-73 277.7 172 78.5
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 1.5e-72 276.6 187 73.8
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 7.4e-72 274.2 199 72.4
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 7.4e-72 274.2 189 72.0
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 1.3e-71 273.5 185 73.5
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 2.1e-71 272.7 181 74.6
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 4.8e-71 271.6 187 73.3
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 6.2e-71 271.2 199 71.4
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 3.1e-70 268.9 201 69.7
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 3.1e-70 268.9 185 74.1
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 4.0e-70 268.5 196 68.9
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 4.0e-70 268.5 188 72.3
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 5.3e-70 268.1 193 69.9
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 6.9e-70 267.7 168 81.0
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 6.9e-70 267.7 190 72.1
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 5.8e-69 264.6 181 74.0
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 2.2e-68 262.7 188 71.3
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 2.9e-68 262.3 190 71.6
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 3.8e-68 261.9 185 69.7
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 6.5e-68 261.2 191 72.8
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 1.1e-67 260.4 189 72.5
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 1.9e-67 259.6 181 70.2
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 1.9e-67 259.6 180 72.2
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 2.5e-67 259.2 168 74.4
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 2.5e-67 259.2 188 71.3
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 3.2e-67 258.8 183 74.3
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 5.5e-67 258.1 198 70.2
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 5.5e-67 258.1 190 71.1
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 5.5e-67 258.1 177 71.8
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 9.3e-67 257.3 173 73.4
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 4.6e-66 255.0 191 68.6
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 6.0e-66 254.6 186 71.0
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 1.3e-65 253.4 188 65.4
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 2.3e-65 252.7 186 67.2
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 2.3e-65 252.7 168 73.2
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 3.0e-65 252.3 187 66.3
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 3.0e-65 252.3 172 73.3
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 1.1e-64 250.4 187 65.8
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 1.9e-64 249.6 185 68.1
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 4.3e-64 248.4 139 84.9
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 7.4e-64 247.7 157 74.5
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 9.7e-64 247.3 172 72.1
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 9.7e-64 247.3 186 68.3
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 9.7e-64 247.3 194 66.5
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 9.7e-64 247.3 153 78.4
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 2.2e-63 246.1 187 67.4
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 2.8e-63 245.7 196 67.9
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 2.8e-63 245.7 172 71.5
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 4.8e-63 245.0 172 72.1
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 8.2e-63 244.2 187 70.1
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 3.1e-62 242.3 152 79.6
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 6.9e-62 241.1 191 65.4
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 9.0e-62 240.7 188 69.1
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 1.5e-61 240.0 173 71.1
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 2.0e-61 239.6 172 70.3
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 2.0e-61 239.6 172 70.3
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 2.0e-61 239.6 172 70.3
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 2.0e-61 239.6 172 70.3
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 2.0e-61 239.6 199 64.8
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 2.6e-61 239.2 162 72.8
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 4.5e-61 238.4 138 83.3
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 5.9e-61 238.0 172 69.8
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 5.9e-61 238.0 182 65.4
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 7.6e-61 237.7 209 62.2
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 7.6e-61 237.7 211 61.1
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 1.0e-60 237.3 170 68.8
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 2.9e-60 235.7 205 61.0
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 4.2e-59 231.9 173 67.1
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 5.5e-59 231.5 209 60.8
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 6.1e-58 228.0 187 60.4
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 1.0e-57 227.3 136 77.2
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 6.7e-57 224.6 169 67.5
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 6.7e-57 224.6 169 67.5
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 1.5e-56 223.4 165 69.1
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 4.3e-56 221.9 162 67.9
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.4e-54 216.9 184 62.5
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 3.4e-53 212.2 191 58.6
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 5.9e-53 211.5 184 59.8
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 5.0e-52 208.4 152 70.4
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 8.5e-52 207.6 136 69.1
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 9.1e-46 187.6 113 75.2
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 5.0e-44 181.8 199 53.8
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 1.4e-43 180.3 178 52.2
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 2.5e-43 179.5 145 65.5
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 4.2e-43 178.7 163 57.1
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 5.7e-40 168.3 183 53.6
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 1.6e-37 160.2 188 50.0
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 1.6e-34 150.2 84 79.8
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 4.0e-33 145.6 142 51.4
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 1.2e-29 134.0 149 46.3
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 1.1e-27 127.5 67 82.1
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 1.7e-23 113.6 91 68.1
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 5.4e-22 108.6 84 60.7
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 2.3e-20 103.2 114 52.6
Actinidia26259 Actinidia chinensis HOM05D007258 ORTHO05D008852 1.9e-19 100.1 92 65.2
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 1.2e-18 97.4 53 77.4
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 6.8e-17 91.7 68 60.3
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 2.7e-13 79.7 63 58.7
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 7.8e-13 78.2 105 51.4
Migut.I00106 Erythranthe guttata HOM05D007258 ORTHO05D008852 2.9e-07 59.7 37 64.9
MCO01G001 Micromonas commoda HOM05D007258 ORTHO05D008852 1.4e-06 57.4 59 42.4
PGR004G0458 Punica granatum HOM05D007258 ORTHO05D008852 4.1e-06 55.8 86 46.5


User provided reference genes

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