Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 4.1e-59 231.1 110 100.0
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 1.8e-46 189.1 106 81.1
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 1.5e-40 169.5 109 73.4
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 3.3e-40 168.3 109 71.6
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 3.3e-40 168.3 110 70.9
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 5.6e-40 167.5 109 72.5
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 5.6e-40 167.5 110 74.5
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 2.8e-39 165.2 110 69.1
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 4.7e-39 164.5 109 72.5
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 8.0e-39 163.7 109 68.8
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 6.8e-38 160.6 109 70.6
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.2e-37 159.8 107 71.0
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 2.0e-37 159.1 109 67.9
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.3e-36 156.4 109 68.8
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 1.3e-36 156.4 107 69.2
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 2.2e-36 155.6 107 69.2
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 2.2e-36 155.6 107 69.2
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 2.2e-36 155.6 111 64.9
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 2.9e-36 155.2 108 67.6
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 4.9e-36 154.5 109 67.0
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 8.3e-36 153.7 108 66.7
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 1.1e-35 153.3 108 68.5
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 1.1e-35 153.3 110 68.2
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 1.1e-35 153.3 107 65.4
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 1.9e-35 152.5 107 64.5
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 4.1e-35 151.4 111 63.1
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 7.0e-35 150.6 110 64.5
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 1.2e-34 149.8 108 65.7
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 3.5e-34 148.3 108 62.0
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 3.5e-34 148.3 109 61.5
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 7.8e-34 147.1 109 65.1
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 1.3e-33 146.4 109 63.3
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 3.0e-33 145.2 111 61.3
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 3.0e-33 145.2 107 61.7
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 3.9e-33 144.8 107 64.5
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 6.6e-33 144.1 107 65.4
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 8.6e-33 143.7 111 63.1
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 8.6e-33 143.7 111 63.1
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 8.6e-33 143.7 111 57.7
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 3.3e-32 141.7 110 64.5
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 3.3e-32 141.7 110 64.5
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 3.3e-32 141.7 109 64.2
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 4.3e-32 141.4 104 63.5
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 5.6e-32 141.0 109 64.2
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 5.6e-32 141.0 107 63.6
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 9.5e-32 140.2 111 58.6
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 1.2e-31 139.8 111 57.7
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 3.6e-31 138.3 106 59.4
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 3.6e-31 138.3 110 59.1
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 4.7e-31 137.9 99 68.7
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 4.7e-31 137.9 110 54.5
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 6.2e-31 137.5 107 60.7
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 8.1e-31 137.1 110 59.1
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 1.4e-30 136.3 108 63.0
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 1.4e-30 136.3 110 58.2
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 2.3e-30 135.6 108 59.3
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 4.0e-30 134.8 109 58.7
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 4.0e-30 134.8 108 60.2
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 8.9e-30 133.7 108 58.3
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 8.9e-30 133.7 108 60.2
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 1.2e-29 133.3 111 55.9
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 2.0e-29 132.5 108 59.3
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 3.4e-29 131.7 111 58.6
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 7.5e-29 130.6 111 55.0
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 7.5e-29 130.6 107 57.0
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 9.9e-29 130.2 109 57.8
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 9.9e-29 130.2 108 58.3
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 1.3e-28 129.8 107 57.9
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 1.3e-28 129.8 88 69.3
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 1.3e-28 129.8 109 57.8
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 2.9e-28 128.6 109 56.0
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 6.4e-28 127.5 98 66.3
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 6.4e-28 127.5 108 56.5
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 7.1e-27 124.0 113 54.9
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 1.2e-26 123.2 108 57.4
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 6.0e-26 120.9 120 52.5
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 7.8e-26 120.6 102 56.9
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 6.6e-25 117.5 109 52.3
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 8.6e-25 117.1 66 80.3
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 1.1e-24 116.7 109 51.4
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 4.3e-24 114.8 109 50.5
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 4.3e-24 114.8 109 50.5
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 1.2e-23 113.2 106 55.7
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 1.6e-23 112.8 110 49.1
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 6.2e-23 110.9 106 50.0
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 8.1e-23 110.5 111 54.1
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 1.1e-22 110.2 69 71.0
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 1.1e-22 110.2 104 53.8
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 1.4e-22 109.8 109 47.7
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 1.4e-22 109.8 109 47.7
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 1.8e-22 109.4 109 48.6
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 2.4e-22 109.0 109 47.7
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 2.4e-22 109.0 109 47.7
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 3.1e-22 108.6 109 47.7
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 3.1e-22 108.6 69 71.0
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 1.7e-20 102.8 109 46.8
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 3.8e-20 101.7 110 43.6
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 1.6e-18 96.3 109 45.9
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 1.0e-17 93.6 68 63.2
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 1.3e-17 93.2 58 72.4
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 4.3e-16 88.2 107 37.4
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 1.6e-15 86.3 109 42.2
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 4.7e-15 84.7 109 39.4
COL.COLO4_08471 Corchorus olitorius HOM05D007430 ORTHO05D009322 6.0e-10 67.8 37 86.5
CBR_g37835 Chara braunii HOM05D007430 ORTHO05D009322 1.8e-06 56.2 55 45.5
Rhsim10G0056400 Rhododendron simsii HOM05D007430 ORTHO05D009322 3.1e-06 55.5 51 54.9


User provided reference genes

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