Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 9.1e-57 223.4 117 100.0
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 1.0e-47 193.4 116 85.3
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 2.6e-43 178.7 112 83.0
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 2.6e-43 178.7 117 76.1
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 3.4e-43 178.3 111 81.1
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 3.4e-43 178.3 111 81.1
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 3.4e-43 178.3 112 80.4
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 5.7e-43 177.6 121 78.5
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 7.5e-43 177.2 111 80.2
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 7.5e-43 177.2 111 80.2
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 7.5e-43 177.2 110 82.7
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 9.8e-43 176.8 112 80.4
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 9.8e-43 176.8 120 78.3
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 1.3e-42 176.4 112 82.1
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 2.8e-42 175.3 110 81.8
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 3.7e-42 174.9 111 79.3
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 4.8e-42 174.5 112 80.4
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 8.3e-42 173.7 109 80.7
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 1.1e-41 173.3 108 81.5
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 1.1e-41 173.3 120 75.8
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.1e-41 171.4 121 75.2
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.1e-41 171.4 121 75.2
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 4.1e-41 171.4 108 80.6
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 5.4e-41 171.0 111 78.4
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 7.0e-41 170.6 118 74.6
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 1.2e-40 169.9 109 79.8
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.6e-40 169.5 112 77.7
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.6e-40 169.5 112 77.7
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 1.6e-40 169.5 110 80.0
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 2.0e-40 169.1 106 83.0
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 2.0e-40 169.1 112 77.7
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 2.7e-40 168.7 112 78.6
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 3.5e-40 168.3 117 73.5
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 3.5e-40 168.3 111 80.2
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 5.9e-40 167.5 112 76.8
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 7.7e-40 167.2 111 76.6
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 7.7e-40 167.2 108 79.6
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 7.7e-40 167.2 114 72.8
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 1.0e-39 166.8 114 74.6
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 1.0e-39 166.8 110 77.3
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 1.3e-39 166.4 110 78.2
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 1.3e-39 166.4 111 79.3
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 1.3e-39 166.4 111 79.3
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 1.7e-39 166.0 113 73.5
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 2.9e-39 165.2 114 74.6
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 2.9e-39 165.2 107 77.6
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 6.6e-39 164.1 110 75.5
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 8.6e-39 163.7 111 74.8
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 1.1e-38 163.3 107 76.6
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 1.1e-38 163.3 111 73.9
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 1.5e-38 162.9 110 78.2
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 1.5e-38 162.9 111 73.0
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 1.9e-38 162.5 112 76.8
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 2.5e-38 162.2 107 76.6
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 2.5e-38 162.2 106 78.3
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 3.3e-38 161.8 121 71.9
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 4.2e-38 161.4 113 73.5
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 8.0e-37 157.1 111 73.9
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 8.0e-37 157.1 111 73.9
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 8.0e-37 157.1 114 69.3
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 1.0e-36 156.8 114 71.1
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 1.4e-36 156.4 111 71.2
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 1.4e-36 156.4 111 73.9
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 1.8e-36 156.0 105 74.3
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 3.0e-36 155.2 111 72.1
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 3.0e-36 155.2 108 73.1
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 6.8e-36 154.1 112 72.3
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 6.8e-36 154.1 111 69.4
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 1.2e-35 153.3 110 70.9
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 1.7e-34 149.4 97 79.4
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 1.1e-33 146.7 111 67.6
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 2.4e-33 145.6 110 70.0
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 4.1e-33 144.8 114 65.8
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 9.2e-33 143.7 114 66.7
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 1.6e-32 142.9 104 67.3
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.7e-32 142.1 96 72.9
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 5.9e-32 141.0 114 61.4
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 1.3e-31 139.8 94 74.5
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 1.7e-31 139.4 100 75.0
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 8.6e-31 137.1 101 67.3
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 4.3e-30 134.8 104 63.5
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 4.3e-30 134.8 104 62.5
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 9.5e-30 133.7 104 62.5
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 9.5e-30 133.7 122 62.3
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 1.6e-29 132.9 108 63.0
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 2.1e-29 132.5 112 62.5
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 2.1e-29 132.5 114 64.0
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 4.7e-29 131.3 121 61.2
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 2.0e-27 125.9 77 83.1
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 2.6e-27 125.6 110 57.3
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.6e-27 125.6 114 61.4
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 2.6e-27 125.6 114 61.4
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.9e-26 122.1 112 60.7
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 2.9e-26 122.1 112 58.9
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 3.7e-26 121.7 114 56.1
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 4.9e-26 121.3 76 80.3
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 6.4e-26 120.9 109 56.9
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 8.3e-26 120.6 112 58.0
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 2.4e-25 119.0 114 55.3
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 3.2e-25 118.6 76 78.9
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.6e-24 116.3 77 76.6
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.6e-24 116.3 77 76.6
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 2.7e-24 115.5 112 57.1
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 3.5e-24 115.2 114 57.9
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 2.3e-23 112.5 88 63.6
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 4.3e-22 108.2 89 66.3
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 1.2e-21 106.7 109 50.5
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 1.6e-21 106.3 110 50.0
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 2.1e-21 105.9 110 50.0
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 3.6e-21 105.1 109 51.4
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 1.4e-20 103.2 74 67.6
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 2.3e-20 102.4 108 50.9
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 4.0e-20 101.7 108 51.9
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 4.0e-20 101.7 108 51.9
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 4.0e-20 101.7 96 57.3
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 5.2e-20 101.3 71 69.0
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 5.2e-20 101.3 71 69.0
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 1.2e-19 100.1 111 43.2
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 1.5e-19 99.8 73 65.8
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 5.8e-19 97.8 106 46.2
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 5.8e-19 97.8 58 82.8
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 5.8e-19 97.8 58 82.8
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 6.4e-18 94.4 88 62.5
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 9.2e-17 90.5 74 55.4
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 3.5e-16 88.6 103 45.6
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 6.6e-15 84.3 97 42.3
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 2.9e-10 68.9 43 79.1
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 4.9e-10 68.2 62 59.7
FAN03G1360 Fragaria x ananassa HOM05D006288 ORTHO05D007416 5.1e-07 58.2 56 48.2


User provided reference genes

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