Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G071500 Carya illinoinensis HOM05D006243 ORTHO05D007688 1.9e-235 818.9 449 100.0
Cfa007817 Carpinus fangiana HOM05D006243 ORTHO05D007688 2.8e-183 645.6 449 81.5
Haze_14258 Corylus avellana HOM05D006243 ORTHO05D007688 1.5e-179 633.3 449 80.8
GSVIVG01030779001 Vitis vinifera HOM05D006243 ORTHO05D007688 1.7e-159 566.6 447 74.0
Potri.017G129100 Populus trichocarpa HOM05D006243 ORTHO05D007688 1.9e-158 563.1 451 72.3
TAR629G1693 Trochodendron aralioides HOM05D006243 ORTHO05D007688 2.1e-157 559.7 457 72.2
CSS0038083 Camellia sinensis var. sinensis HOM05D006243 ORTHO05D007688 6.0e-157 558.1 443 73.4
Atru.chr1.1900 Acer truncatum HOM05D006243 ORTHO05D007688 7.8e-157 557.8 447 73.8
Manes.01G117900 Manihot esculenta HOM05D006243 ORTHO05D007688 1.7e-156 556.6 451 73.4
Cpa.g.sc67.47 Carica papaya HOM05D006243 ORTHO05D007688 5.1e-156 555.1 447 72.7
Ciclev10011587m.g Citrus clementina HOM05D006243 ORTHO05D007688 6.6e-156 554.7 441 74.8
Prupe.3G161300 Prunus persica HOM05D006243 ORTHO05D007688 6.6e-156 554.7 446 72.9
RcHm_v2.0_Chr3g0493131 Rosa chinensis HOM05D006243 ORTHO05D007688 8.9e-153 544.3 450 70.9
MD09G1263800 Malus domestica HOM05D006243 ORTHO05D007688 1.2e-152 543.9 452 72.1
MD17G1259100 Malus domestica HOM05D006243 ORTHO05D007688 7.6e-152 541.2 449 71.7
Sabra17G0107600 Salix brachista HOM05D006243 ORTHO05D007688 7.6e-152 541.2 462 70.6
FAN19G0552 Fragaria x ananassa HOM05D006243 ORTHO05D007688 9.9e-152 540.8 441 71.2
FAN28G0309 Fragaria x ananassa HOM05D006243 ORTHO05D007688 2.9e-151 539.3 449 69.9
FAN26G0580 Fragaria x ananassa HOM05D006243 ORTHO05D007688 4.9e-151 538.5 449 69.5
Thecc.04G115200 Theobroma cacao HOM05D006243 ORTHO05D007688 4.9e-151 538.5 440 73.4
FvH4_1g28740 Fragaria vesca HOM05D006243 ORTHO05D007688 2.4e-150 536.2 441 71.0
TWI53G0799 Tripterygium wilfordii HOM05D006243 ORTHO05D007688 6.6e-148 528.1 456 70.0
CANSAT64G2718 Cannabis sativa HOM05D006243 ORTHO05D007688 1.5e-147 526.9 450 69.3
Eucgr.J01597 Eucalyptus grandis HOM05D006243 ORTHO05D007688 9.0e-145 517.7 449 69.0
Duzib133G1335 Durio zibethinus HOM05D006243 ORTHO05D007688 7.6e-144 514.6 440 70.5
Rhsim10G0177000 Rhododendron simsii HOM05D006243 ORTHO05D007688 1.9e-142 510.0 448 68.3
Gohir.A07G078300 Gossypium hirsutum HOM05D006243 ORTHO05D007688 2.4e-142 509.6 446 70.2
Gorai.001G088700 Gossypium raimondii HOM05D006243 ORTHO05D007688 7.8e-141 504.6 446 69.7
Nn4g24254 Nelumbo nucifera HOM05D006243 ORTHO05D007688 1.7e-140 503.4 452 67.3
Gohir.D07G083100 Gossypium hirsutum HOM05D006243 ORTHO05D007688 2.3e-140 503.1 446 69.5
vmacro07692 Vaccinium macrocarpon HOM05D006243 ORTHO05D007688 5.6e-139 498.4 485 60.8
Actinidia06497 Actinidia chinensis HOM05D006243 ORTHO05D007688 3.6e-138 495.7 375 76.3
Lalb_Chr10g0104381 Lupinus albus HOM05D006243 ORTHO05D007688 3.6e-138 495.7 452 67.5
ClCG05G011500 Citrullus lanatus HOM05D006243 ORTHO05D007688 9.0e-137 491.1 449 66.1
Glyma.02G245300 Glycine max HOM05D006243 ORTHO05D007688 5.8e-136 488.4 450 64.2
MELO3C020192.2 Cucumis melo HOM05D006243 ORTHO05D007688 1.6e-133 480.3 449 65.3
LjContig00141g0011202 Lotus japonicus HOM05D006243 ORTHO05D007688 4.6e-133 478.8 450 64.2
Phvul.008G235800 Phaseolus vulgaris HOM05D006243 ORTHO05D007688 1.3e-132 477.2 450 64.2
Oeu012257.1 Olea europaea HOM05D006243 ORTHO05D007688 1.8e-132 476.9 427 67.9
Cc07_g13520 Coffea canephora HOM05D006243 ORTHO05D007688 1.9e-131 473.4 424 67.9
Aqoxy3G00051 Aquilegia oxysepala HOM05D006243 ORTHO05D007688 2.1e-130 469.9 446 65.7
PSO017G3733 Papaver somniferum HOM05D006243 ORTHO05D007688 2.1e-130 469.9 442 64.7
COL.COLO4_10159 Corchorus olitorius HOM05D006243 ORTHO05D007688 3.7e-130 469.2 503 61.2
Medtr5g078290 Medicago truncatula HOM05D006243 ORTHO05D007688 4.8e-130 468.8 454 64.1
AUR62038703 Chenopodium quinoa HOM05D006243 ORTHO05D007688 1.8e-129 466.8 447 64.0
Sc10g0004760 Simmondsia chinensis HOM05D006243 ORTHO05D007688 1.8e-129 466.8 449 63.9
AUR62018213 Chenopodium quinoa HOM05D006243 ORTHO05D007688 3.1e-129 466.1 447 63.1
SalBow3G2874 Salvia bowleyana HOM05D006243 ORTHO05D007688 3.1e-129 466.1 432 65.7
CsaV3_3G020810 Cucumis sativus L. HOM05D006243 ORTHO05D007688 2.0e-128 463.4 408 67.6
CAN.G222.23 Capsicum annuum HOM05D006243 ORTHO05D007688 4.5e-128 462.2 416 65.6
DCAR_014173 Daucus carota HOM05D006243 ORTHO05D007688 6.4e-127 458.4 434 63.8
Oeu032326.2 Olea europaea HOM05D006243 ORTHO05D007688 1.4e-126 457.2 429 65.5
PSO478G0940 Papaver somniferum HOM05D006243 ORTHO05D007688 3.2e-126 456.1 442 63.3
MSTRG.23392 Avicennia marina HOM05D006243 ORTHO05D007688 4.2e-126 455.7 425 65.9
Solyc11g011170.2 Solanum lycopersicum HOM05D006243 ORTHO05D007688 4.2e-126 455.7 416 65.4
Peaxi162Scf00305g00613 Petunia axillaris HOM05D006243 ORTHO05D007688 1.2e-125 454.1 428 64.7
Lalb_Chr17g0346141 Lupinus albus HOM05D006243 ORTHO05D007688 1.6e-125 453.8 439 64.0
Sopen11g005930 Solanum pennellii HOM05D006243 ORTHO05D007688 2.7e-125 453.0 416 64.9
Lj4A263G87 Lonicera japonica HOM05D006243 ORTHO05D007688 3.5e-125 452.6 331 80.4
PGSC0003DMG402015686 Solanum tuberosum HOM05D006243 ORTHO05D007688 4.6e-125 452.2 415 65.3
arahy.Tifrunner.gnm1.ann1.Y3W4B5 Arachis hypogaea HOM05D006243 ORTHO05D007688 6.0e-125 451.8 312 83.7
EL10Ac2g03168 Beta vulgaris HOM05D006243 ORTHO05D007688 1.0e-124 451.1 447 62.9
Aa31LG2G3000 Aethionema arabicum HOM05D006243 ORTHO05D007688 3.7e-122 442.6 439 64.9
ECA246G3278 Erigeron canadensis HOM05D006243 ORTHO05D007688 8.2e-122 441.4 421 62.7
Lsat_1_v5_gn_3_64500 Lactuca sativa HOM05D006243 ORTHO05D007688 1.4e-121 440.7 441 58.3
HanXRQChr13g0418351 Helianthus annuus HOM05D006243 ORTHO05D007688 8.4e-119 431.4 417 62.6
CARHR058210 Cardamine hirsuta HOM05D006243 ORTHO05D007688 2.5e-118 429.9 376 71.0
PGR004G2672 Punica granatum HOM05D006243 ORTHO05D007688 5.5e-118 428.7 407 67.6
BcaB03g15275 Brassica carinata HOM05D006243 ORTHO05D007688 6.0e-117 425.2 448 63.4
Migut.H02264 Erythranthe guttata HOM05D006243 ORTHO05D007688 7.9e-117 424.9 425 63.5
Sp5g21350 Schrenkiella parvula HOM05D006243 ORTHO05D007688 8.7e-116 421.4 447 63.1
THA.LOC104805617 Tarenaya hassleriana HOM05D006243 ORTHO05D007688 8.7e-116 421.4 448 62.3
ATR0317G069 Amborella trichopoda HOM05D006243 ORTHO05D007688 1.1e-115 421.0 441 59.2
BraA07t30960Z Brassica rapa HOM05D006243 ORTHO05D007688 1.5e-115 420.6 454 63.0
AL2G24050 Arabidopsis lyrata HOM05D006243 ORTHO05D007688 2.5e-115 419.9 449 62.8
Carub.0002s1234 Capsella rubella HOM05D006243 ORTHO05D007688 9.7e-115 417.9 396 67.2
AT1G66330 Arabidopsis thaliana HOM05D006243 ORTHO05D007688 1.3e-114 417.5 378 70.4
BcaC08g46068 Brassica carinata HOM05D006243 ORTHO05D007688 2.2e-114 416.8 451 62.7
A07p33290 Brassica napus HOM05D006243 ORTHO05D007688 2.8e-114 416.4 455 63.1
BcaB05g24167 Brassica carinata HOM05D006243 ORTHO05D007688 3.7e-114 416.0 379 68.1
BraA02t06418Z Brassica rapa HOM05D006243 ORTHO05D007688 1.1e-113 414.5 379 69.7
C06p39620 Brassica napus HOM05D006243 ORTHO05D007688 5.3e-113 412.1 452 62.6
BolC6t39055H Brassica oleracea HOM05D006243 ORTHO05D007688 5.3e-113 412.1 452 62.6
BcaC03g14742 Brassica carinata HOM05D006243 ORTHO05D007688 2.0e-112 410.2 450 61.8
BolC2t08324H Brassica oleracea HOM05D006243 ORTHO05D007688 2.0e-112 410.2 450 61.8
Nitab4.5_0000201g0240 Nicotiana tabacum HOM05D006243 ORTHO05D007688 7.7e-112 408.3 423 59.8
Glyma.14G215400 Glycine max HOM05D006243 ORTHO05D007688 1.1e-110 404.4 406 62.6
C02p21930 Brassica napus HOM05D006243 ORTHO05D007688 1.9e-110 403.7 430 62.8
A02p13590 Brassica napus HOM05D006243 ORTHO05D007688 9.4e-110 401.4 359 71.3
TPR.G8275 Trifolium pratense HOM05D006243 ORTHO05D007688 3.6e-109 399.4 301 71.4
CDE04G1800 Ceratophyllum demersum HOM05D006243 ORTHO05D007688 1.1e-107 394.4 367 66.5
Os05g0148700 Oryza sativa ssp. japonica HOM05D006243 ORTHO05D007688 4.8e-106 389.0 376 63.6
Zm00001eb165460 Zea mays HOM05D006243 ORTHO05D007688 1.8e-105 387.1 378 63.8
Sed0013436 Sechium edule HOM05D006243 ORTHO05D007688 1.2e-104 384.4 387 63.3
Ca_05826_v3 Cicer arietinum L. HOM05D006243 ORTHO05D007688 3.8e-103 379.4 454 56.4
HPP92_027416 Vanilla planifolia HOM05D006243 ORTHO05D007688 1.4e-102 377.5 454 55.7
arahy.Tifrunner.gnm1.ann1.SFD8TD Arachis hypogaea HOM05D006243 ORTHO05D007688 3.0e-100 369.8 307 75.2
SGA_v2.0_scaffold108G30955 Striga asiatica HOM05D006243 ORTHO05D007688 5.1e-100 369.0 419 58.2
Nitab4.5_0009518g0020 Nicotiana tabacum HOM05D006243 ORTHO05D007688 2.6e-99 366.7 423 55.6
Hund13108 Selenicereus undatus HOM05D006243 ORTHO05D007688 7.4e-99 365.2 256 75.8
SEGI_26344 Sequoiadendron giganteum HOM05D006243 ORTHO05D007688 7.2e-94 348.6 316 67.1
unitig_736.g22596 Utricularia gibba HOM05D006243 ORTHO05D007688 2.4e-89 333.6 247 72.1
Thhalv10018612m.g Eutrema salsugineum HOM05D006243 ORTHO05D007688 9.1e-89 331.6 307 69.7
Ah.10g032360 Amaranthus hybridus HOM05D006243 ORTHO05D007688 2.5e-78 297.0 450 42.4
Dinv28209 Davidia involucrata HOM05D006243 ORTHO05D007688 1.4e-76 291.2 275 68.0
Actinidia17213 Actinidia chinensis HOM05D006243 ORTHO05D007688 4.4e-75 286.2 191 78.5
Psat2g047960 Pisum sativum HOM05D006243 ORTHO05D007688 9.8e-75 285.0 351 55.8
MD17G1258600 Malus domestica HOM05D006243 ORTHO05D007688 1.3e-74 284.6 228 70.6
QL02p058075 Quercus lobata HOM05D006243 ORTHO05D007688 8.0e-69 265.4 238 71.0
VMungo0647G1427 Vigna mungo HOM05D006243 ORTHO05D007688 4.4e-67 259.6 325 53.5
Mapoly0055s0114 Marchantia polymorpha HOM05D006243 ORTHO05D007688 5.4e-57 226.1 328 47.0
Pp3c5_8230 Physcomitrium patens HOM05D006243 ORTHO05D007688 2.7e-56 223.8 320 51.2
Pp3c16_1710 Physcomitrium patens HOM05D006243 ORTHO05D007688 1.1e-54 218.4 315 47.9
AagrBONN_evm.TU.Sc2ySwM_117.2468 Anthoceros agrestis HOM05D006243 ORTHO05D007688 2.1e-53 214.2 307 47.2
VMungo0647G1521 Vigna mungo HOM05D006243 ORTHO05D007688 4.7e-53 213.0 123 89.4
Pp3c25_7980 Physcomitrium patens HOM05D006243 ORTHO05D007688 2.2e-50 204.1 241 49.0
SMO238G0021 Selaginella moellendorffii HOM05D006243 ORTHO05D007688 9.2e-41 172.2 248 43.5
Lsat_1_v5_gn_2_20381 Lactuca sativa HOM05D006243 ORTHO05D007688 8.6e-39 165.6 122 70.5
CBR_g27960 Chara braunii HOM05D006243 ORTHO05D007688 3.8e-34 150.2 210 41.0
RcHm_v2.0_Chr7g0216651 Rosa chinensis HOM05D006243 ORTHO05D007688 1.3e-29 135.2 77 92.2
Actinidia17214 Actinidia chinensis HOM05D006243 ORTHO05D007688 5.8e-27 126.3 160 56.9
Lsat_1_v5_gn_9_50281 Lactuca sativa HOM05D006243 ORTHO05D007688 6.4e-18 96.3 60 80.0
FAN28G0752 Fragaria x ananassa HOM05D006243 ORTHO05D007688 9.3e-17 92.4 110 44.5
Hund13037 Selenicereus undatus HOM05D006243 ORTHO05D007688 1.9e-14 84.7 163 32.5
Lsat_1_v5_gn_9_64341 Lactuca sativa HOM05D000326 ORTHO05D000312 1.3e-10 72.0 163 35.0
unitig_736.g22595 Utricularia gibba HOM05D006243 ORTHO05D007688 2.5e-06 57.8 139 30.9


User provided reference genes

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