Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 8.8e-40 166.4 78 100.0
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 1.7e-35 152.1 75 93.3
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 3.8e-35 151.0 77 87.0
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 4.2e-34 147.5 78 85.9
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 7.2e-34 146.7 78 85.9
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 2.1e-33 145.2 78 82.1
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 2.7e-33 144.8 78 82.1
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 3.6e-33 144.4 75 85.3
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 8.0e-33 143.3 78 82.1
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 1.4e-32 142.5 75 84.0
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 1.8e-32 142.1 78 80.8
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 1.8e-32 142.1 73 89.0
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 2.3e-32 141.7 74 86.5
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 3.0e-32 141.4 74 85.1
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 4.0e-32 141.0 78 84.6
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 4.0e-32 141.0 74 83.8
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 5.2e-32 140.6 75 86.7
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 6.8e-32 140.2 75 84.0
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 6.8e-32 140.2 78 80.8
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 6.8e-32 140.2 78 79.5
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 8.8e-32 139.8 78 80.8
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 1.2e-31 139.4 78 80.8
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.5e-31 139.0 74 83.8
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 2.0e-31 138.7 78 78.2
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 2.6e-31 138.3 75 81.3
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 2.6e-31 138.3 75 81.3
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 3.4e-31 137.9 78 80.8
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 5.7e-31 137.1 75 80.0
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 9.8e-31 136.3 74 81.1
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.3e-30 136.0 78 76.9
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 1.3e-30 136.0 74 81.1
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 1.7e-30 135.6 74 81.1
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 1.7e-30 135.6 72 83.3
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 2.2e-30 135.2 75 80.0
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 2.8e-30 134.8 72 83.3
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 2.8e-30 134.8 73 79.5
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 2.8e-30 134.8 73 82.2
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 3.7e-30 134.4 69 88.4
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 3.7e-30 134.4 75 80.0
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 4.8e-30 134.0 74 79.7
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 4.8e-30 134.0 78 79.5
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 6.3e-30 133.7 76 77.6
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 6.3e-30 133.7 76 77.6
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 6.3e-30 133.7 76 77.6
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 8.3e-30 133.3 73 80.8
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 8.3e-30 133.3 78 80.8
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 1.1e-29 132.9 74 78.4
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 1.1e-29 132.9 74 79.7
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 1.1e-29 132.9 78 71.8
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 1.1e-29 132.9 78 71.8
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 1.4e-29 132.5 72 81.9
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 1.8e-29 132.1 74 78.4
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 2.4e-29 131.7 72 80.6
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 7.0e-29 130.2 73 78.1
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 7.0e-29 130.2 73 78.1
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 2.0e-28 128.6 74 75.7
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 2.0e-28 128.6 72 77.8
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.7e-28 128.3 73 76.7
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 2.7e-28 128.3 69 85.5
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 2.7e-28 128.3 69 85.5
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 2.7e-28 128.3 73 76.7
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 5.9e-28 127.1 73 75.3
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 5.9e-28 127.1 71 78.9
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 5.9e-28 127.1 76 73.7
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 1.7e-27 125.6 74 73.0
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 2.2e-27 125.2 74 71.6
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 2.9e-27 124.8 71 74.6
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 5.0e-27 124.0 72 79.2
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 6.5e-27 123.6 72 77.8
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 6.5e-27 123.6 72 77.8
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 6.5e-27 123.6 72 77.8
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 6.5e-27 123.6 72 77.8
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 1.1e-26 122.9 72 77.8
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 1.1e-26 122.9 72 77.8
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 1.1e-26 122.9 72 77.8
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 1.1e-26 122.9 72 77.8
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 1.1e-26 122.9 72 77.8
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 1.1e-26 122.9 69 81.2
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 1.5e-26 122.5 72 76.4
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.5e-26 122.5 72 72.2
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 1.9e-26 122.1 66 83.3
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 4.2e-26 120.9 72 77.8
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.2e-25 119.4 72 65.3
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 1.6e-25 119.0 72 75.0
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 1.6e-25 119.0 67 77.6
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 1.6e-25 119.0 72 76.4
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 2.7e-25 118.2 66 78.8
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 2.7e-25 118.2 66 78.8
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 2.7e-25 118.2 66 78.8
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.7e-25 118.2 72 69.4
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.7e-25 118.2 72 69.4
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 2.7e-25 118.2 69 76.8
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 3.6e-25 117.9 62 82.3
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 3.6e-25 117.9 72 70.8
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 8.0e-25 116.7 67 73.1
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 8.0e-25 116.7 67 73.1
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 8.0e-25 116.7 69 73.9
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 8.0e-25 116.7 69 73.9
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 8.0e-25 116.7 72 69.4
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 1.8e-24 115.5 75 72.0
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 2.3e-24 115.2 72 75.0
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 4.0e-24 114.4 64 79.7
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.0e-24 114.4 74 64.9
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 8.8e-24 113.2 74 66.2
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 2.6e-23 111.7 63 73.0
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 3.4e-23 111.3 72 66.7
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 3.4e-23 111.3 72 66.7
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 3.4e-23 111.3 72 66.7
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.4e-23 110.9 74 63.5
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.4e-23 110.9 74 63.5
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 5.7e-23 110.5 74 62.2
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 9.8e-23 109.8 74 63.5
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 4.9e-22 107.5 72 63.9
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.1e-21 106.3 69 62.3
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.8e-21 105.5 49 91.8
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 4.1e-21 104.4 69 60.9
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 5.9e-20 100.5 70 55.7
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 7.7e-20 100.1 48 89.6
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 2.9e-19 98.2 62 67.7
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.5e-18 95.9 58 75.9
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 4.2e-18 94.4 76 60.5
Cre03.g207152 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 1.0e-08 63.2 69 44.9
Cre03.g207100 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 1.2e-07 59.7 71 39.4
Cre13.g575701 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 1.2e-07 59.7 70 42.9
TAR371G0913 Trochodendron aralioides HOM05D006437 ORTHO05D007973 4.4e-07 57.8 31 74.2
TAR371G0323 Trochodendron aralioides HOM05D006437 ORTHO05D007973 7.5e-07 57.0 38 60.5


User provided reference genes

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