Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 6.9e-47 190.3 95 100.0
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 1.3e-40 169.5 92 90.2
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 1.7e-40 169.1 93 89.2
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 3.7e-40 167.9 93 86.0
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 1.8e-39 165.6 91 89.0
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 2.0e-38 162.2 90 86.7
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 2.6e-38 161.8 89 86.5
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 2.6e-38 161.8 93 83.9
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 4.5e-38 161.0 90 85.6
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 5.9e-38 160.6 93 84.9
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 7.7e-38 160.2 93 81.7
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 7.7e-38 160.2 93 81.7
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 1.7e-37 159.1 93 83.9
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 1.7e-37 159.1 93 83.9
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 2.9e-37 158.3 93 80.6
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 2.9e-37 158.3 93 83.9
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 6.5e-37 157.1 93 80.6
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 1.1e-36 156.4 93 79.6
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 1.4e-36 156.0 93 82.8
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 1.4e-36 156.0 89 83.1
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 1.4e-36 156.0 93 81.7
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 1.9e-36 155.6 90 81.1
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 1.9e-36 155.6 81 91.4
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 2.5e-36 155.2 93 80.6
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 4.2e-36 154.5 90 81.1
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 5.5e-36 154.1 93 78.5
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 5.5e-36 154.1 93 80.6
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 7.2e-36 153.7 93 76.3
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 7.2e-36 153.7 93 80.6
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 1.2e-35 152.9 93 81.7
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 1.2e-35 152.9 89 80.9
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 1.6e-35 152.5 93 78.5
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 2.1e-35 152.1 88 80.7
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 2.1e-35 152.1 90 82.2
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 3.6e-35 151.4 88 81.8
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 4.7e-35 151.0 89 79.8
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 4.7e-35 151.0 93 77.4
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 6.1e-35 150.6 91 76.9
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 6.1e-35 150.6 93 77.4
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 6.1e-35 150.6 93 77.4
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 6.1e-35 150.6 88 81.8
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 7.9e-35 150.2 92 78.3
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 1.0e-34 149.8 93 74.2
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 1.4e-34 149.4 92 79.3
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 1.8e-34 149.1 86 80.2
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 1.8e-34 149.1 93 75.3
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 2.3e-34 148.7 88 81.8
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 2.3e-34 148.7 87 80.5
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 2.3e-34 148.7 90 77.8
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 3.0e-34 148.3 92 77.2
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 3.9e-34 147.9 93 75.3
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 5.2e-34 147.5 92 79.3
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 5.2e-34 147.5 90 76.7
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 5.2e-34 147.5 90 76.7
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 5.2e-34 147.5 90 76.7
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 8.8e-34 146.7 88 78.4
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 1.1e-33 146.4 92 78.3
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 1.5e-33 146.0 88 80.7
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 2.0e-33 145.6 92 78.3
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 2.0e-33 145.6 87 79.3
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 2.0e-33 145.6 88 78.4
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 3.3e-33 144.8 88 79.5
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 3.3e-33 144.8 88 79.5
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 3.3e-33 144.8 92 77.2
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 3.3e-33 144.8 85 77.6
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 3.3e-33 144.8 84 81.0
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 3.3e-33 144.8 89 76.4
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 4.4e-33 144.4 88 78.4
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 4.4e-33 144.4 88 79.5
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 4.4e-33 144.4 88 79.5
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 4.4e-33 144.4 88 79.5
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 7.4e-33 143.7 88 77.3
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 7.4e-33 143.7 93 73.1
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 9.7e-33 143.3 90 74.4
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 1.3e-32 142.9 92 76.1
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 1.3e-32 142.9 93 75.3
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 1.3e-32 142.9 90 77.8
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 1.7e-32 142.5 84 81.0
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 2.8e-32 141.7 88 77.3
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 4.8e-32 141.0 88 77.3
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.8e-31 139.0 101 68.3
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 9.1e-31 136.7 126 59.5
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 5.9e-30 134.0 77 80.5
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 7.7e-30 133.7 102 64.7
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 6.5e-29 130.6 69 89.9
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 9.4e-28 126.7 77 76.6
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 4.7e-27 124.4 81 74.1
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 4.7e-27 124.4 81 74.1
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 1.0e-26 123.2 77 74.0
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 4.0e-26 121.3 68 85.3
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 2.0e-25 119.0 141 46.8
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 5.7e-25 117.5 70 77.1
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 7.5e-25 117.1 67 79.1
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 9.7e-25 116.7 70 75.7
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 9.7e-25 116.7 69 75.4
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 1.3e-24 116.3 66 84.8
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 1.7e-24 115.9 70 72.9
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 4.8e-24 114.4 66 81.8
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 1.1e-23 113.2 66 81.8
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 1.4e-23 112.8 71 74.6
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 3.1e-23 111.7 79 63.3
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 9.1e-23 110.2 63 84.1
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 1.0e-21 106.7 68 72.1
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 1.7e-21 105.9 84 59.5
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 5.5e-20 100.9 77 61.0
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 2.6e-17 92.0 65 61.5
SGA_v2.0_scaffold33G13472 Striga asiatica HOM05D007149 ORTHO05D008956 6.3e-16 87.4 45 86.7
RcHm_v2.0_Chr2g0163021 Rosa chinensis HOM05D007149 ORTHO05D008956 2.7e-14 82.0 66 63.6
Nitab4.5_0002288g0070 Nicotiana tabacum HOM05D007149 ORTHO05D008956 3.8e-13 78.2 90 51.1
PRCOL_00003753 Prasinoderma coloniale HOM05D007149 ORTHO05D008956 1.0e-10 70.1 78 44.9
MCO15G246 Micromonas commoda HOM05D007149 ORTHO05D008956 1.4e-10 69.7 70 45.7


User provided reference genes

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