Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 1.4e-125 453.0 235 100.0
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 1.9e-77 293.1 281 60.5
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 5.7e-74 281.6 281 58.4
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 3.0e-59 232.6 298 49.7
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 8.8e-59 231.1 283 47.7
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 2.2e-57 226.5 375 43.7
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 2.8e-57 226.1 285 48.8
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 1.0e-54 217.6 289 47.1
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 1.3e-54 217.2 297 47.5
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 2.7e-52 209.5 290 44.5
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 1.8e-51 206.8 278 46.0
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 3.0e-51 206.1 283 47.0
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 3.9e-51 205.7 285 43.9
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 1.1e-50 204.1 290 44.1
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 9.7e-50 201.1 282 43.3
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 2.2e-49 199.9 297 43.8
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 2.4e-48 196.4 289 42.9
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 3.1e-48 196.1 290 43.4
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 3.5e-47 192.6 290 42.4
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 1.0e-46 191.0 285 43.9
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 2.2e-46 189.9 290 43.4
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 5.0e-46 188.7 310 42.3
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 1.9e-45 186.8 290 41.7
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 4.2e-45 185.7 290 42.4
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 1.2e-44 184.1 282 43.6
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 1.0e-43 181.0 289 39.1
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 1.5e-42 177.2 284 40.5
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 4.4e-42 175.6 292 38.7
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 4.4e-42 175.6 284 40.8
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 5.7e-42 175.3 288 39.9
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 9.7e-42 174.5 284 39.8
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 1.3e-41 174.1 291 37.1
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 2.2e-41 173.3 288 39.9
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 4.8e-41 172.2 298 40.3
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 6.3e-41 171.8 284 38.7
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 6.3e-41 171.8 284 40.1
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 1.4e-40 170.6 281 38.4
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 2.4e-40 169.9 327 35.8
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 3.1e-40 169.5 311 39.2
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 4.1e-40 169.1 291 36.1
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 9.1e-40 167.9 303 35.3
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 1.2e-39 167.5 296 39.2
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 1.6e-39 167.2 270 41.9
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 4.5e-39 165.6 282 37.9
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 4.5e-39 165.6 280 40.0
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 5.9e-39 165.2 287 39.0
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 1.7e-38 163.7 251 41.4
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 2.9e-38 162.9 290 37.2
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 1.5e-37 160.6 290 36.2
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 2.5e-37 159.8 312 37.2
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 7.2e-37 158.3 285 36.5
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 1.2e-36 157.5 293 34.1
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 2.7e-36 156.4 280 38.6
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 4.7e-36 155.6 309 36.2
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 6.1e-36 155.2 196 46.4
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 1.4e-35 154.1 307 35.8
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 3.0e-35 152.9 271 40.6
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 8.8e-35 151.4 306 35.9
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 8.8e-35 151.4 283 36.7
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 2.0e-34 150.2 296 36.1
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 3.7e-33 146.0 282 34.8
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 5.9e-31 138.7 290 34.8
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 2.2e-30 136.7 294 35.4
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 2.7e-28 129.8 309 32.7
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 8.0e-28 128.3 235 38.3
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 1.0e-27 127.9 98 59.2
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 1.8e-27 127.1 253 36.4
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 3.0e-27 126.3 258 38.4
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 4.0e-27 125.9 262 37.4
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 6.8e-27 125.2 263 36.1
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 2.0e-26 123.6 291 33.7
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 9.8e-26 121.3 310 31.6
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 3.7e-25 119.4 181 38.7
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 5.4e-24 115.5 234 34.6
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 4.5e-23 112.5 155 47.7
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 2.3e-22 110.2 110 53.6
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 5.6e-21 105.5 270 34.1
Lsat_1_v5_gn_3_87441 Lactuca sativa HOM05D007356 ORTHO05D009247 4.7e-20 102.4 91 54.9
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 3.0e-19 99.8 142 47.2
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 3.0e-19 99.8 268 31.0
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 3.0e-19 99.8 272 31.6
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 3.0e-19 99.8 266 34.2
Sc11g0008210 Simmondsia chinensis HOM05D007356 ORTHO05D009247 6.8e-19 98.6 93 52.7
Actinidia15867 Actinidia chinensis HOM05D007356 ORTHO05D009247 8.9e-19 98.2 207 39.1
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 2.2e-17 93.6 136 48.5
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 8.3e-17 91.7 92 48.9
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 1.4e-16 90.9 264 31.8
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 2.3e-14 83.6 202 30.7
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 3.3e-13 79.7 195 32.8
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 9.5e-13 78.2 256 27.3
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 1.4e-11 74.3 123 40.7
Lj2C447T11 Lonicera japonica HOM05D007356 ORTHO05D009247 5.2e-11 72.4 111 42.3
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 1.2e-10 71.2 116 42.2
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 1.3e-09 67.8 93 33.3
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 7.0e-08 62.0 76 48.7
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 1.2e-07 61.2 129 35.7


User provided reference genes

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