Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G047400 Carya illinoinensis HOM05D007617 ORTHO05D007195 2.8e-67 258.5 130 100.0
CiPaw.09G026700 Carya illinoinensis HOM05D007617 ORTHO05D007195 2.8e-67 258.5 130 100.0
QL02p073546 Quercus lobata HOM05D007617 ORTHO05D007195 2.6e-44 182.2 129 75.2
Haze_14778 Corylus avellana HOM05D007617 ORTHO05D007195 1.5e-36 156.4 124 69.4
Cfa007314 Carpinus fangiana HOM05D000615 ORTHO05D007195 3.4e-36 155.2 132 67.4
TAR374G0075 Trochodendron aralioides HOM05D007617 ORTHO05D007195 1.8e-21 106.3 138 51.4
Prupe.3G296000 Prunus persica HOM05D007617 ORTHO05D007195 3.1e-21 105.5 138 51.4
Lalb_Chr02g0158101 Lupinus albus HOM05D007617 ORTHO05D007195 1.3e-19 100.1 131 51.1
Medtr1g093790 Medicago truncatula HOM05D007617 ORTHO05D007195 1.3e-19 100.1 130 49.2
Atru.chr6.2453 Acer truncatum HOM05D007617 ORTHO05D007195 1.7e-19 99.8 140 47.9
Ciclev10017789m.g Citrus clementina HOM05D007617 ORTHO05D007195 2.2e-19 99.4 140 49.3
CANSAT64G0294 Cannabis sativa HOM05D007617 ORTHO05D007195 4.9e-19 98.2 142 48.6
Hma1.2p1_0818F.1_g223400 Hydrangea macrophylla HOM05D007617 ORTHO05D007195 2.4e-18 95.9 136 44.9
TAR371G0337 Trochodendron aralioides HOM05D007617 ORTHO05D007195 2.4e-18 95.9 135 47.4
Lj2g0010313 Lotus japonicus HOM05D007617 ORTHO05D007195 6.0e-17 91.3 133 49.6
Lalb_Chr21g0317701 Lupinus albus HOM05D007617 ORTHO05D007195 7.8e-17 90.9 136 47.8
Sed0018064 Sechium edule HOM05D007617 ORTHO05D007195 7.8e-17 90.9 132 47.7
TPR.G31739 Trifolium pratense HOM05D007617 ORTHO05D007195 1.0e-16 90.5 130 43.8
Thecc.03G118700 Theobroma cacao HOM05D011792 ORTHO05D007195 2.3e-16 89.4 146 43.8
Psat6g179560 Pisum sativum HOM05D007617 ORTHO05D007195 6.6e-16 87.8 130 45.4
PGR142G0897 Punica granatum HOM05D007617 ORTHO05D007195 8.7e-16 87.4 131 42.0
DCAR_011273 Daucus carota HOM05D007617 ORTHO05D007195 1.1e-15 87.0 135 46.7
Potri.012G090700 Populus trichocarpa HOM05D007617 ORTHO05D007195 1.5e-15 86.7 140 43.6
Glyma.05G114700 Glycine max HOM05D007617 ORTHO05D007195 3.3e-15 85.5 139 43.9
Phvul.004G059700 Phaseolus vulgaris HOM05D007617 ORTHO05D007195 9.6e-15 84.0 132 44.7
vmacro18302 Vaccinium macrocarpon HOM05D007617 ORTHO05D007195 9.6e-15 84.0 130 43.1
Ca_11155_v3 Cicer arietinum L. HOM05D007617 ORTHO05D007195 1.6e-14 83.2 130 44.6
Ca_11158_v3 Cicer arietinum L. HOM05D007617 ORTHO05D007195 1.6e-14 83.2 130 44.6
Glyma.19G053100 Glycine max HOM05D007617 ORTHO05D007195 1.6e-14 83.2 139 46.0
MD06G1161600 Malus domestica HOM05D007617 ORTHO05D007195 6.2e-14 81.3 136 43.4
Ciclev10022896m.g Citrus clementina HOM05D007617 ORTHO05D007195 8.1e-14 80.9 134 44.0
VMungo0464G0279 Vigna mungo HOM05D007617 ORTHO05D007195 1.1e-13 80.5 132 44.7
Aqoxy5G03650 Aquilegia oxysepala HOM05D007617 ORTHO05D007195 1.4e-13 80.1 140 40.0
Potri.001G340100 Populus trichocarpa HOM05D007617 ORTHO05D007195 2.6e-12 75.9 134 47.0
ClCG05G013140 Citrullus lanatus HOM05D007617 ORTHO05D007195 5.8e-12 74.7 134 42.5
Dinv33408 Davidia involucrata HOM05D007617 ORTHO05D007195 2.9e-11 72.4 125 40.0
MD14G1167200 Malus domestica HOM05D007617 ORTHO05D007195 2.9e-11 72.4 124 43.5
Oeu050454.1 Olea europaea HOM05D007617 ORTHO05D007195 3.8e-11 72.0 110 45.5
MD02G1049300 Malus domestica HOM05D007617 ORTHO05D007195 4.9e-11 71.6 136 44.1
Manes.14G057300 Manihot esculenta HOM05D007617 ORTHO05D007195 6.4e-11 71.2 91 47.3
TAR622G0315 Trochodendron aralioides HOM05D007617 ORTHO05D007195 8.4e-11 70.9 139 38.8
MELO3C014838.2 Cucumis melo HOM05D007617 ORTHO05D007195 1.1e-10 70.5 136 41.2
Nitab4.5_0004496g0030 Nicotiana tabacum HOM05D007617 ORTHO05D007195 1.4e-10 70.1 65 58.5
RcHm_v2.0_Chr7g0191931 Rosa chinensis HOM05D007617 ORTHO05D007195 1.9e-10 69.7 68 57.4
Sopen02g038090 Solanum pennellii HOM05D007617 ORTHO05D007195 1.9e-10 69.7 75 54.7
Oeu054643.1 Olea europaea HOM05D007617 ORTHO05D007195 2.4e-10 69.3 134 38.1
Sed0015223 Sechium edule HOM05D007617 ORTHO05D007195 2.4e-10 69.3 136 40.4
Nitab4.5_0000040g0620 Nicotiana tabacum HOM05D007617 ORTHO05D007195 4.2e-10 68.6 65 58.5
Duzib205G1108 Durio zibethinus HOM05D011792 ORTHO05D007195 9.3e-10 67.4 147 39.5
Oeu023836.1 Olea europaea HOM05D007617 ORTHO05D007195 9.3e-10 67.4 164 37.2
FvH4_5g06710 Fragaria vesca HOM05D007617 ORTHO05D007195 1.2e-09 67.0 65 56.9
FAN08G2040 Fragaria x ananassa HOM05D007617 ORTHO05D007195 1.2e-09 67.0 65 56.9
FAN18G3066 Fragaria x ananassa HOM05D007617 ORTHO05D007195 1.2e-09 67.0 65 56.9
QL10p005918 Quercus lobata HOM05D007617 ORTHO05D007195 1.6e-09 66.6 139 37.4
PGSC0003DMG400012616 Solanum tuberosum HOM05D007617 ORTHO05D007195 1.6e-09 66.6 86 47.7
THA.LOC109117150 Tarenaya hassleriana HOM05D007617 ORTHO05D007195 1.6e-09 66.6 133 35.3
EL10As2g23175 Beta vulgaris HOM05D007617 ORTHO05D007195 2.1e-09 66.2 134 40.3
CsaV3_3G027400 Cucumis sativus L. HOM05D007617 ORTHO05D007195 2.1e-09 66.2 131 39.7
Nn4g22527 Nelumbo nucifera HOM05D007617 ORTHO05D007195 2.1e-09 66.2 144 38.2
Solyc02g067910.1 Solanum lycopersicum HOM05D007617 ORTHO05D007195 2.1e-09 66.2 64 56.2
Sopen02g017030 Solanum pennellii HOM05D007617 ORTHO05D007195 2.7e-09 65.9 127 39.4
Prupe.5G161500 Prunus persica HOM05D007617 ORTHO05D007195 3.5e-09 65.5 137 35.8
Rhsim08G0047600 Rhododendron simsii HOM05D007617 ORTHO05D007195 3.5e-09 65.5 130 40.0
FAN13G2538 Fragaria x ananassa HOM05D007617 ORTHO05D007195 4.6e-09 65.1 64 57.8
ATR1145G009 Amborella trichopoda HOM05D007617 ORTHO05D007195 6.0e-09 64.7 136 40.4
Lsat_1_v5_gn_2_91001 Lactuca sativa HOM05D007617 ORTHO05D007195 6.0e-09 64.7 142 37.3
BraA06t25018Z Brassica rapa HOM05D010525 ORTHO05D007195 7.8e-09 64.3 109 42.2
Manes.15G153500 Manihot esculenta HOM05D007617 ORTHO05D007195 7.8e-09 64.3 145 37.2
CAN.G1057.14 Capsicum annuum HOM05D007617 ORTHO05D007195 1.0e-08 63.9 130 39.2
Lsat_1_v5_gn_3_30061 Lactuca sativa HOM05D007617 ORTHO05D007195 1.0e-08 63.9 130 39.2
Haze_07632 Corylus avellana HOM05D007617 ORTHO05D007195 1.3e-08 63.5 142 37.3
Manes.06G112400 Manihot esculenta HOM05D007617 ORTHO05D007195 1.3e-08 63.5 137 40.1
CARHR276990 Cardamine hirsuta HOM05D010525 ORTHO05D007195 3.0e-08 62.4 68 52.9
Cc07_g00130 Coffea canephora HOM05D007617 ORTHO05D007195 5.1e-08 61.6 114 43.9
Hund06047 Selenicereus undatus HOM05D007617 ORTHO05D007195 5.1e-08 61.6 131 38.2
Actinidia36140 Actinidia chinensis HOM05D007617 ORTHO05D007195 6.6e-08 61.2 137 35.8
Lsat_1_v5_gn_2_94241 Lactuca sativa HOM05D007617 ORTHO05D007195 6.6e-08 61.2 145 37.2
Sc04g0009720 Simmondsia chinensis HOM05D007617 ORTHO05D007195 8.7e-08 60.8 79 50.6
SGA_v2.0_scaffold47G17524 Striga asiatica HOM05D007617 ORTHO05D007195 8.7e-08 60.8 133 36.8
MSTRG.15542 Avicennia marina HOM05D007617 ORTHO05D007195 1.1e-07 60.5 90 43.3
A06p19360 Brassica napus HOM05D010525 ORTHO05D007195 1.1e-07 60.5 90 43.3
Nn3g16639 Nelumbo nucifera HOM05D007617 ORTHO05D007195 1.1e-07 60.5 142 36.6
AL8G40240 Arabidopsis lyrata HOM05D010525 ORTHO05D007195 1.5e-07 60.1 101 43.6
FAN04G0785 Fragaria x ananassa HOM05D007617 ORTHO05D007195 1.5e-07 60.1 119 38.7
TWI23G0333 Tripterygium wilfordii HOM05D007617 ORTHO05D007195 3.3e-07 58.9 124 39.5
Atru.chr9.1807 Acer truncatum HOM05D007617 ORTHO05D007195 4.3e-07 58.5 135 36.3
CANSAT80G0013 Cannabis sativa HOM05D007617 ORTHO05D007195 4.3e-07 58.5 136 36.8
Sp5g13710 Schrenkiella parvula HOM05D010525 ORTHO05D007195 4.3e-07 58.5 138 36.2
SGA_v2.0_scaffold30G12404 Striga asiatica HOM05D007617 ORTHO05D007195 4.3e-07 58.5 97 41.2
CiPaw.11G014400 Carya illinoinensis HOM05D007617 ORTHO05D007195 7.3e-07 57.8 142 38.0
Thhalv10010898m.g Eutrema salsugineum HOM05D010525 ORTHO05D007195 7.3e-07 57.8 139 34.5
BcaC07g39315 Brassica carinata HOM05D010525 ORTHO05D007195 1.6e-06 56.6 135 34.8
C08p23300 Brassica napus HOM05D010525 ORTHO05D007195 1.6e-06 56.6 135 34.8
BolC8t49961H Brassica oleracea HOM05D010525 ORTHO05D007195 1.6e-06 56.6 135 34.8
Carub.0008s2391 Capsella rubella HOM05D010525 ORTHO05D007195 1.6e-06 56.6 94 42.6
Gohir.D07G059400 Gossypium hirsutum HOM05D011792 ORTHO05D007195 1.6e-06 56.6 141 36.2
Nitab4.5_0014774g0010 Nicotiana tabacum HOM05D007617 ORTHO05D007195 1.6e-06 56.6 136 37.5
unitig_32.g10674 Utricularia gibba HOM05D007617 ORTHO05D007195 1.6e-06 56.6 72 47.2
Migut.K00629 Erythranthe guttata HOM05D007617 ORTHO05D007195 2.1e-06 56.2 132 38.6
Aa31LG1G18820 Aethionema arabicum HOM05D010525 ORTHO05D007195 2.8e-06 55.8 73 49.3
Gohir.D12G189700 Gossypium hirsutum HOM05D011792 ORTHO05D007195 2.8e-06 55.8 138 36.2
Sp2g26280 Schrenkiella parvula HOM05D010525 ORTHO05D007195 2.8e-06 55.8 70 48.6
MSTRG.549 Avicennia marina HOM05D007617 ORTHO05D007195 3.6e-06 55.5 86 43.0
Gohir.A07G055100 Gossypium hirsutum HOM05D011792 ORTHO05D007195 3.6e-06 55.5 141 36.2
AL5G27740 Arabidopsis lyrata HOM05D010525 ORTHO05D007195 4.8e-06 55.1 71 52.1
BcaB01g00826 Brassica carinata HOM05D010525 ORTHO05D007195 4.8e-06 55.1 138 35.5
Migut.K01418 Erythranthe guttata HOM05D007617 ORTHO05D007195 4.8e-06 55.1 112 39.3
Os03g0670000 Oryza sativa ssp. japonica HOM05D007617 ORTHO05D007195 6.2e-06 54.7 45 71.1
Zm00001eb306910 Zea mays HOM05D007617 ORTHO05D007195 6.2e-06 54.7 42 73.8
PGSC0003DMG400006919 Solanum tuberosum HOM05D007617 ORTHO05D007195 8.1e-06 54.3 63 47.6


User provided reference genes

Program Settings