Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G043400 Carya illinoinensis HOM05D018456 ORTHO05D024862 0.0e+00 4268.0 2396 100.0
QL02p074766 Quercus lobata HOM05D018456 ORTHO05D024862 1.3e-277 961.4 2656 36.0
CiPaw.03G043500 Carya illinoinensis HOM05D018456 ORTHO05D024862 2.5e-262 910.6 983 58.7
Haze_14737 Corylus avellana HOM05D018456 ORTHO05D024862 4.0e-260 903.3 2157 38.8
Cfa007371 Carpinus fangiana HOM05D018456 ORTHO05D024862 1.4e-249 868.2 2603 35.2
Dinv35105 Davidia involucrata HOM05D008944 ORTHO05D012715 6.2e-59 235.0 2923 24.3
Dinv33443 Davidia involucrata HOM05D008944 ORTHO05D012715 3.5e-46 192.6 2383 23.8
Ciclev10014006m.g Citrus clementina HOM05D018456 ORTHO05D012260 5.3e-42 178.7 2253 25.2
GSVIVG01032411001 Vitis vinifera HOM05D000662 ORTHO05D012715 4.8e-35 155.6 2228 23.4
RcHm_v2.0_Chr2g0172861 Rosa chinensis HOM05D011862 ORTHO05D014222 8.1e-35 154.8 2100 25.3
TAR622G0869 Trochodendron aralioides HOM05D008944 ORTHO05D012260 3.2e-31 142.9 525 32.4
Duzib187G0380 Durio zibethinus HOM05D010821 ORTHO05D012260 1.6e-30 140.6 1300 26.8
Lju41A41T31 Lonicera japonica HOM05D008944 ORTHO05D012260 5.1e-29 135.6 413 34.6
Hma1.2p1_0999F.1_g246230 Hydrangea macrophylla HOM05D008944 ORTHO05D012260 4.3e-28 132.5 258 40.3
FAN14G4966 Fragaria x ananassa HOM05D011862 ORTHO05D014222 1.8e-26 127.1 2565 24.7
CSS0002578 Camellia sinensis var. sinensis HOM05D008944 ORTHO05D012715 7.6e-25 121.7 2059 24.2
FAN02G2635 Fragaria x ananassa HOM05D011862 ORTHO05D014222 2.5e-23 116.7 2569 23.2
Potri.001G345300 Populus trichocarpa HOM05D013434 ORTHO05D014659 2.5e-23 116.7 2593 23.4
Thecc.04G017000 Theobroma cacao HOM05D010821 ORTHO05D012260 3.2e-23 116.3 2874 22.4
FAN09G0781 Fragaria x ananassa HOM05D011862 ORTHO05D014222 2.5e-20 106.7 2674 23.5
FvH4_6g51240 Fragaria vesca HOM05D011862 ORTHO05D014222 2.8e-19 103.2 2561 23.8
Rhsim08G0050800 Rhododendron simsii HOM05D008944 ORTHO05D012715 6.3e-19 102.1 2291 22.4
Gohir.A05G355900 Gossypium hirsutum HOM05D010821 ORTHO05D012260 3.1e-18 99.8 1137 25.8
Duzib147G0652 Durio zibethinus HOM05D010821 ORTHO05D029264 7.7e-17 95.1 2287 22.6
Atru.chr6.2390 Acer truncatum HOM05D008944 ORTHO05D012260 2.7e-14 86.7 2590 23.3
Duzib264G0142 Durio zibethinus HOM05D010821 ORTHO05D012260 1.8e-13 84.0 1479 22.7
Cpa.g.sc108.66 Carica papaya HOM05D008944 ORTHO05D012260 5.1e-13 82.4 184 39.1
Cc07_g01740 Coffea canephora HOM05D008944 ORTHO05D012260 3.3e-12 79.7 181 37.0
PGSC0003DMG400012631 Solanum tuberosum HOM05D012441 ORTHO05D013726 8.2e-11 75.1 306 31.4
Sabra16G0224300 Salix brachista HOM05D013434 ORTHO05D014659 1.5e-09 70.9 2242 23.4
Gohir.D04G057300 Gossypium hirsutum HOM05D010821 ORTHO05D012260 2.6e-09 70.1 1575 24.2
Nitab4.5_0007124g0010 Nicotiana tabacum HOM05D012441 ORTHO05D013726 5.0e-08 65.9 529 29.1
Nitab4.5_0002468g0060 Nicotiana tabacum HOM05D012441 ORTHO05D013726 1.1e-07 64.7 490 27.3
Gorai.012G064000 Gossypium raimondii HOM05D010821 ORTHO05D012260 1.9e-07 63.9 1631 23.9
Actinidia05998 Actinidia chinensis HOM05D008944 ORTHO05D017205 7.2e-07 62.0 852 23.4
Sabra04G0084900 Salix brachista HOM05D013434 ORTHO05D014659 6.1e-06 58.9 240 30.0
Sopen02g031170 Solanum pennellii HOM05D012441 ORTHO05D013726 7.9e-06 58.5 463 28.1


User provided reference genes

Program Settings