Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 2.4e-150 535.4 260 100.0
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 4.6e-133 478.0 243 96.7
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 5.3e-97 358.2 241 73.0
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 3.4e-96 355.5 241 72.6
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 1.4e-94 350.1 240 72.5
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 3.5e-93 345.5 252 71.0
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 9.3e-70 267.7 260 57.7
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 7.9e-69 264.6 254 54.7
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 6.9e-65 251.5 252 57.1
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 2.1e-61 240.0 252 53.6
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 9.7e-59 231.1 233 54.1
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 1.8e-57 226.9 246 49.6
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 2.6e-56 223.0 238 49.6
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 1.3e-55 220.7 241 53.1
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 1.1e-54 217.6 238 49.6
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 1.9e-54 216.9 238 49.2
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 2.5e-54 216.5 257 48.6
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 3.2e-54 216.1 238 49.2
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 3.2e-54 216.1 255 49.4
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 6.1e-53 211.8 239 49.0
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 7.9e-53 211.5 233 46.8
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 3.0e-52 209.5 249 52.2
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 2.6e-51 206.5 181 65.7
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 3.3e-51 206.1 152 72.4
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 5.7e-51 205.3 249 51.4
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 4.1e-49 199.1 240 47.5
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 3.5e-48 196.1 217 53.5
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 2.2e-47 193.4 181 56.9
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 5.5e-46 188.7 237 47.3
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 6.1e-45 185.3 291 40.5
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 1.2e-43 181.0 179 55.9
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 1.2e-43 181.0 179 55.9
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 1.2e-43 181.0 205 50.7
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 2.6e-43 179.9 235 46.8
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 1.7e-42 177.2 178 52.2
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 4.8e-42 175.6 231 46.8
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 6.3e-42 175.3 208 49.5
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 1.1e-41 174.5 218 45.4
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 7.7e-40 168.3 217 46.5
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 1.7e-39 167.2 187 52.4
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 2.9e-39 166.4 209 46.9
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 7.2e-38 161.8 218 44.0
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 1.2e-37 161.0 256 39.8
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 3.6e-37 159.5 231 44.2
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 1.5e-35 154.1 170 50.0
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 2.8e-34 149.8 254 38.6
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 3.7e-34 149.4 248 38.7
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 8.3e-34 148.3 181 48.1
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 5.0e-31 139.0 254 38.6
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 2.8e-29 133.3 150 48.7
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 1.2e-27 127.9 119 54.6
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 2.6e-27 126.7 236 37.3
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 4.4e-27 125.9 236 37.3
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 9.8e-27 124.8 226 36.3
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 3.8e-23 112.8 244 32.4
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 6.6e-23 112.1 117 51.3
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 7.3e-22 108.6 163 40.5
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 8.0e-21 105.1 207 36.7
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 6.4e-18 95.5 155 43.2
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 1.1e-17 94.7 227 34.8
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 4.1e-17 92.8 181 36.5
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 8.6e-15 85.1 119 43.7
TPR.G11017 Trifolium pratense HOM05D008092 ORTHO05D010277 4.9e-10 69.3 51 62.7
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 7.8e-08 62.0 118 31.4
Pp3c2_13540 Physcomitrium patens HOM05D008092 ORTHO05D010277 2.5e-06 57.0 111 31.5


User provided reference genes

Program Settings