Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G040700 Carya illinoinensis HOM05D003958 ORTHO05D004864 1.4e-181 639.4 311 100.0
CiPaw.04G026700 Carya illinoinensis HOM05D003958 ORTHO05D004864 1.0e-155 553.5 311 85.5
QL02p075632 Quercus lobata HOM05D003958 ORTHO05D004864 5.6e-154 547.7 311 85.9
Haze_14701 Corylus avellana HOM05D003958 ORTHO05D004864 2.0e-151 539.3 310 85.5
Manes.17G113700 Manihot esculenta HOM05D003958 ORTHO05D004864 3.8e-150 535.0 309 83.8
Atru.chr6.2341 Acer truncatum HOM05D003958 ORTHO05D004864 8.4e-150 533.9 312 84.0
Prupe.3G287900 Prunus persica HOM05D003958 ORTHO05D004864 3.5e-148 528.5 312 83.3
TAR622G1043 Trochodendron aralioides HOM05D003958 ORTHO05D004864 3.5e-148 528.5 310 82.3
FvH4_6g51011 Fragaria vesca HOM05D003958 ORTHO05D004864 3.9e-147 525.0 312 82.4
CSS0020788 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 8.7e-147 523.9 312 83.0
CSS0020854 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 8.7e-147 523.9 312 83.0
Sed0009763 Sechium edule HOM05D003958 ORTHO05D004864 8.7e-147 523.9 312 82.1
Thecc.04G013700 Theobroma cacao HOM05D003958 ORTHO05D004864 1.5e-146 523.1 310 81.9
ClCG01G008920 Citrullus lanatus HOM05D003958 ORTHO05D004864 5.6e-146 521.2 312 82.1
Duzib147G0566 Durio zibethinus HOM05D003958 ORTHO05D004864 7.3e-146 520.8 310 81.6
RcHm_v2.0_Chr2g0172551 Rosa chinensis HOM05D003958 ORTHO05D004864 1.6e-145 519.6 313 82.1
Duzib147G0735 Durio zibethinus HOM05D003958 ORTHO05D004864 3.6e-145 518.5 310 81.3
COL.COLO4_29053 Corchorus olitorius HOM05D003958 ORTHO05D004864 1.8e-144 516.2 312 81.1
Ciclev10016011m.g Citrus clementina HOM05D003958 ORTHO05D004864 9.0e-144 513.8 312 79.5
CANSAT64G0951 Cannabis sativa HOM05D003958 ORTHO05D004864 1.2e-143 513.5 316 79.4
CsaV3_1G037790 Cucumis sativus L. HOM05D003958 ORTHO05D004864 2.0e-143 512.7 312 81.4
Duzib147G0897 Durio zibethinus HOM05D003958 ORTHO05D004864 2.0e-143 512.7 314 80.9
MELO3C021808.2 Cucumis melo HOM05D003958 ORTHO05D004864 3.4e-143 511.9 312 82.1
Nn7g37719 Nelumbo nucifera HOM05D003958 ORTHO05D004864 3.4e-143 511.9 312 78.8
Aqoxy2G00425 Aquilegia oxysepala HOM05D003958 ORTHO05D004864 2.9e-142 508.8 313 80.5
Lj7A595G65 Lonicera japonica HOM05D003958 ORTHO05D004864 3.8e-142 508.4 312 80.4
Aqoxy3G00906 Aquilegia oxysepala HOM05D003958 ORTHO05D004864 6.4e-142 507.7 314 79.3
DCAR_009028 Daucus carota HOM05D003958 ORTHO05D004864 4.2e-141 505.0 312 79.5
arahy.Tifrunner.gnm1.ann1.38SPRB Arachis hypogaea HOM05D003958 ORTHO05D004864 1.3e-139 500.0 311 77.8
Cpa.g.sc108.31 Carica papaya HOM05D003958 ORTHO05D004864 1.7e-139 499.6 312 78.5
vmacro18265 Vaccinium macrocarpon HOM05D003958 ORTHO05D004864 2.3e-139 499.2 331 76.7
arahy.Tifrunner.gnm1.ann1.CB8F3G Arachis hypogaea HOM05D003958 ORTHO05D004864 3.0e-139 498.8 311 77.8
Potri.018G120500 Populus trichocarpa HOM05D003958 ORTHO05D004864 6.6e-139 497.7 312 79.2
Sabra18G0100500 Salix brachista HOM05D003958 ORTHO05D004864 6.6e-139 497.7 312 78.5
Lj2g0025561 Lotus japonicus HOM05D003958 ORTHO05D004864 8.7e-139 497.3 312 78.2
Phvul.011G172200 Phaseolus vulgaris HOM05D003958 ORTHO05D004864 2.5e-138 495.7 310 78.1
Lalb_Chr03g0031671 Lupinus albus HOM05D003958 ORTHO05D004864 7.3e-138 494.2 312 77.9
TPR.G11724 Trifolium pratense HOM05D003958 ORTHO05D004864 7.3e-138 494.2 312 77.6
Gohir.A09G027800 Gossypium hirsutum HOM05D003958 ORTHO05D004864 9.6e-138 493.8 311 77.2
THA.LOC104802398 Tarenaya hassleriana HOM05D003958 ORTHO05D004864 1.3e-137 493.4 315 78.1
Eucgr.I01766 Eucalyptus grandis HOM05D003958 ORTHO05D004864 2.1e-137 492.7 309 78.3
Gorai.006G031600 Gossypium raimondii HOM05D003958 ORTHO05D004864 2.1e-137 492.7 311 77.2
PGSC0003DMG400000483 Solanum tuberosum HOM05D003958 ORTHO05D004864 2.1e-137 492.7 309 79.0
Sabra18G0099100 Salix brachista HOM05D003958 ORTHO05D004864 2.8e-137 492.3 312 78.2
Lju41A38T12 Lonicera japonica HOM05D003958 ORTHO05D004864 3.6e-137 491.9 312 76.6
Oeu057051.1 Olea europaea HOM05D003958 ORTHO05D004864 3.6e-137 491.9 309 78.0
Peaxi162Scf00129g01325 Petunia axillaris HOM05D003958 ORTHO05D004864 3.6e-137 491.9 309 77.7
Aa31LG11G15350 Aethionema arabicum HOM05D003958 ORTHO05D004864 4.8e-137 491.5 322 77.6
MBI05_g22036_MAGBIO Magnolia biondii HOM05D003958 ORTHO05D004864 4.8e-137 491.5 309 78.3
Hund02774 Selenicereus undatus HOM05D003958 ORTHO05D004864 4.8e-137 491.5 312 77.2
Sopen02g031390 Solanum pennellii HOM05D003958 ORTHO05D004864 4.8e-137 491.5 309 78.3
TPR.G33516 Trifolium pratense HOM05D003958 ORTHO05D004864 4.8e-137 491.5 314 78.3
Gohir.D09G027100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 6.2e-137 491.1 311 77.2
CAN.G206.10 Capsicum annuum HOM05D003958 ORTHO05D004864 8.1e-137 490.7 309 78.3
Ca_00876_v3 Cicer arietinum L. HOM05D003958 ORTHO05D004864 8.1e-137 490.7 310 77.7
Sabra18G0098500 Salix brachista HOM05D003958 ORTHO05D004864 8.1e-137 490.7 312 78.2
THA.LOC104821089 Tarenaya hassleriana HOM05D003958 ORTHO05D004864 1.8e-136 489.6 312 77.6
Nitab4.5_0002739g0040 Nicotiana tabacum HOM05D003958 ORTHO05D004864 2.4e-136 489.2 309 77.7
Gohir.D13G007800 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.1e-136 488.8 305 76.1
Psat1g092800 Pisum sativum HOM05D003958 ORTHO05D004864 5.3e-136 488.0 315 76.8
Ca_00369_v3 Cicer arietinum L. HOM05D003958 ORTHO05D004864 6.9e-136 487.6 313 78.0
AL6G25360 Arabidopsis lyrata HOM05D003958 ORTHO05D004864 9.0e-136 487.3 319 76.8
Lj3g0001252 Lotus japonicus HOM05D003958 ORTHO05D004864 9.0e-136 487.3 312 77.2
PGR054G0003 Punica granatum HOM05D003958 ORTHO05D004864 9.0e-136 487.3 310 76.5
ECA232G3491 Erigeron canadensis HOM05D003958 ORTHO05D004864 1.2e-135 486.9 310 77.7
EL10Ac9g21169 Beta vulgaris HOM05D003958 ORTHO05D004864 1.5e-135 486.5 312 76.3
Nitab4.5_0008215g0010 Nicotiana tabacum HOM05D003958 ORTHO05D004864 2.0e-135 486.1 311 76.8
AT5G14600 Arabidopsis thaliana HOM05D003958 ORTHO05D004864 3.4e-135 485.3 319 76.2
Cc02_g12190 Coffea canephora HOM05D003958 ORTHO05D004864 3.4e-135 485.3 310 77.7
Lsat_1_v5_gn_4_183181 Lactuca sativa HOM05D003958 ORTHO05D004864 3.4e-135 485.3 317 77.0
PGR119G1149 Punica granatum HOM05D003958 ORTHO05D004864 4.5e-135 485.0 310 76.1
TWI12G0059 Tripterygium wilfordii HOM05D003958 ORTHO05D004864 4.5e-135 485.0 309 78.0
Glyma.15G078000 Glycine max HOM05D003958 ORTHO05D004864 7.6e-135 484.2 313 77.0
Carub.0006s1277 Capsella rubella HOM05D003958 ORTHO05D004864 1.3e-134 483.4 323 75.2
VMungo0540G0822 Vigna mungo HOM05D003958 ORTHO05D004864 1.3e-134 483.4 313 76.7
HanXRQChr09g0255001 Helianthus annuus HOM05D003958 ORTHO05D004864 6.4e-134 481.1 313 76.4
Medtr6g047800 Medicago truncatula HOM05D003958 ORTHO05D004864 8.4e-134 480.7 309 77.0
Phvul.006G181700 Phaseolus vulgaris HOM05D003958 ORTHO05D004864 1.9e-133 479.6 312 76.0
Thhalv10014133m.g Eutrema salsugineum HOM05D003958 ORTHO05D004864 3.2e-133 478.8 319 75.9
Psat1g202680 Pisum sativum HOM05D003958 ORTHO05D004864 1.2e-132 476.9 309 77.7
MSTRG.3157 Avicennia marina HOM05D003958 ORTHO05D004864 1.6e-132 476.5 308 75.6
CARHR198720 Cardamine hirsuta HOM05D003958 ORTHO05D004864 2.7e-132 475.7 319 75.2
Cfa007405 Carpinus fangiana HOM05D003958 ORTHO05D004864 3.5e-132 475.3 283 83.0
C09p62510 Brassica napus HOM05D003958 ORTHO05D004864 4.6e-132 474.9 321 75.1
Sp6g29430 Schrenkiella parvula HOM05D003958 ORTHO05D004864 6.0e-132 474.6 315 75.9
PSO832G3613 Papaver somniferum HOM05D003958 ORTHO05D004864 7.9e-132 474.2 311 74.3
Glyma.13G234900 Glycine max HOM05D003958 ORTHO05D004864 2.3e-131 472.6 314 77.1
PSO063G1059 Papaver somniferum HOM05D003958 ORTHO05D004864 3.0e-131 472.2 311 74.0
BcaNung03113 Brassica carinata HOM05D003958 ORTHO05D004864 1.1e-130 470.3 317 75.4
BolC9t59091H Brassica oleracea HOM05D003958 ORTHO05D004864 1.5e-130 469.9 328 72.9
A10p24040 Brassica napus HOM05D003958 ORTHO05D004864 1.9e-130 469.5 321 74.5
BraA10t44467Z Brassica rapa HOM05D003958 ORTHO05D004864 1.9e-130 469.5 321 74.5
AUR62002487 Chenopodium quinoa HOM05D003958 ORTHO05D004864 3.3e-130 468.8 330 70.6
MD09G1029500 Malus domestica HOM05D003958 ORTHO05D004864 4.3e-130 468.4 282 81.6
CDE06G0036 Ceratophyllum demersum HOM05D003958 ORTHO05D004864 1.3e-129 466.8 310 73.9
Migut.H00096 Erythranthe guttata HOM05D003958 ORTHO05D004864 4.8e-129 464.9 309 74.8
AUR62023705 Chenopodium quinoa HOM05D003958 ORTHO05D004864 9.0e-128 460.7 299 75.3
Hma1.2p1_0858F.1_g229230 Hydrangea macrophylla HOM05D003958 ORTHO05D004864 2.0e-127 459.5 333 71.2
Sc03g0007660 Simmondsia chinensis HOM05D003958 ORTHO05D004864 5.8e-127 458.0 310 72.9
Sabra18G0101000 Salix brachista HOM05D003958 ORTHO05D004864 1.0e-126 457.2 282 79.1
ATR0057G029 Amborella trichopoda HOM05D003958 ORTHO05D004864 6.4e-126 454.5 313 73.2
FAN14G0618 Fragaria x ananassa HOM05D003958 ORTHO05D004864 1.6e-124 449.9 273 81.0
FAN09G1134 Fragaria x ananassa HOM05D003958 ORTHO05D004864 8.7e-123 444.1 268 81.7
SGA_v2.0_scaffold196G40937 Striga asiatica HOM05D003958 ORTHO05D004864 9.6e-122 440.7 310 71.6
BcaC03g13470 Brassica carinata HOM05D003958 ORTHO05D004864 4.9e-118 428.3 312 70.8
Sabra18G0098900 Salix brachista HOM05D003958 ORTHO05D004864 1.9e-117 426.4 263 78.7
Zm00001eb071120 Zea mays HOM05D003958 ORTHO05D004864 9.3e-117 424.1 319 65.8
Os04g0319600 Oryza sativa ssp. japonica HOM05D003958 ORTHO05D004864 3.5e-116 422.2 322 65.8
SEGI_01237 Sequoiadendron giganteum HOM05D003958 ORTHO05D004864 4.3e-114 415.2 322 66.5
arahy.Tifrunner.gnm1.ann1.8Z0BSJ Arachis hypogaea HOM05D003958 ORTHO05D004864 1.8e-112 409.8 308 67.5
Gorai.013G008200 Gossypium raimondii HOM05D003958 ORTHO05D004864 1.8e-112 409.8 305 65.6
Dinv35088 Davidia involucrata HOM05D003958 ORTHO05D004864 5.0e-110 401.7 312 68.6
CSS0027303 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 4.6e-108 395.2 312 67.3
MD17G1031500 Malus domestica HOM05D003958 ORTHO05D004864 1.1e-106 390.6 221 86.4
Pp3c18_5220 Physcomitrium patens HOM05D003958 ORTHO05D004864 7.7e-103 377.9 332 59.6
Medtr2g014590 Medicago truncatula HOM05D003958 ORTHO05D004864 3.2e-101 372.5 231 77.1
HPP92_013732 Vanilla planifolia HOM05D003958 ORTHO05D004864 7.2e-101 371.3 229 75.5
SMO361G0280 Selaginella moellendorffii HOM05D003958 ORTHO05D004864 5.1e-99 365.2 307 62.2
SMO361G0823 Selaginella moellendorffii HOM05D003958 ORTHO05D004864 8.8e-99 364.4 307 61.9
AagrBONN_evm.TU.Sc2ySwM_344.690 Anthoceros agrestis HOM05D003958 ORTHO05D004864 2.2e-97 359.8 308 60.7
Mapoly0053s0094 Marchantia polymorpha HOM05D003958 ORTHO05D004864 3.8e-94 349.0 334 53.3
arahy.Tifrunner.gnm1.ann1.Z5MU8N Arachis hypogaea HOM05D003958 ORTHO05D004864 5.7e-90 335.1 204 80.9
arahy.Tifrunner.gnm1.ann1.M5ZQAR Arachis hypogaea HOM05D003958 ORTHO05D004864 1.6e-87 327.0 222 73.4
CBR_g9110 Chara braunii HOM05D003958 ORTHO05D004864 8.5e-86 321.2 373 48.5
SGA_v2.0_scaffold34G13865 Striga asiatica HOM05D003958 ORTHO05D004864 2.3e-83 313.2 321 54.8
Atru.chr6.2249 Acer truncatum HOM05D003958 ORTHO05D004864 4.8e-81 305.4 165 89.7
unitig_62.g23558 Utricularia gibba HOM05D003958 ORTHO05D004864 2.4e-80 303.1 211 73.5
MCO10G191 Micromonas commoda HOM05D003958 ORTHO05D004864 1.4e-75 287.3 315 50.5
Cre05.g244236 Chlamydomonas reinhardtii HOM05D003958 ORTHO05D004864 5.2e-75 285.4 271 55.0
GSVIVG01032441001 Vitis vinifera HOM05D000462 ORTHO05D002607 6.3e-73 278.5 157 86.6
Ah.07g203270 Amaranthus hybridus HOM05D003958 ORTHO05D004864 4.0e-67 259.2 150 84.0
PRCOL_00006622 Prasinoderma coloniale HOM05D003958 ORTHO05D004864 8.9e-67 258.1 346 43.1
arahy.Tifrunner.gnm1.ann1.FV4QAS Arachis hypogaea HOM05D003958 ORTHO05D004864 1.4e-64 250.8 171 74.9
Eucgr.L02705 Eucalyptus grandis HOM05D003958 ORTHO05D004864 5.0e-62 242.3 171 70.2
Gohir.A10G243400 Gossypium hirsutum HOM05D003958 ORTHO05D004864 5.2e-59 232.3 134 82.1
Ah.07g203280 Amaranthus hybridus HOM05D003958 ORTHO05D004864 2.6e-58 229.9 165 69.1
Gohir.A03G000004 Gossypium hirsutum HOM05D003958 ORTHO05D004864 6.8e-51 205.3 112 86.6
BcaC01g04875 Brassica carinata HOM05D003958 ORTHO05D004864 3.4e-50 203.0 240 51.2
Haze_26162 Corylus avellana HOM05D003958 ORTHO05D004864 9.8e-50 201.4 288 41.7
Gohir.A01G232100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 9.8e-50 201.4 121 79.3
Sopen06g018800 Solanum pennellii HOM05D003958 ORTHO05D004864 8.3e-49 198.4 131 74.8
Gohir.D11G349300 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.9e-48 197.2 121 76.0
Gorai.004G293900 Gossypium raimondii HOM05D003958 ORTHO05D004864 2.4e-48 196.8 121 76.0
Gorai.006G274500 Gossypium raimondii HOM05D003958 ORTHO05D004864 2.4e-48 196.8 121 76.0
Gorai.007G380200 Gossypium raimondii HOM05D003958 ORTHO05D004864 3.2e-48 196.4 116 81.0
Gohir.D08G275428 Gossypium hirsutum HOM05D003958 ORTHO05D004864 9.2e-48 194.9 121 75.2
Gohir.D09G250100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.2e-47 194.5 118 77.1
Gohir.D01G222101 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.7e-47 193.4 118 77.1
Gohir.D03G178200 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.5e-47 193.0 118 76.3
Gohir.A12G000201 Gossypium hirsutum HOM05D003958 ORTHO05D004864 7.8e-47 191.8 297 43.4
Gorai.N017600 Gossypium raimondii HOM05D003958 ORTHO05D004864 1.3e-46 191.0 118 77.1
FAN14G4368 Fragaria x ananassa HOM05D000001 ORTHO05D000003 1.9e-45 187.2 156 63.5
Gohir.A06G000101 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.1e-40 171.4 93 89.2
Gohir.1Z049515 Gossypium hirsutum HOM05D003958 ORTHO05D015143 4.6e-39 166.0 102 74.5
Gorai.006G275300 Gossypium raimondii HOM05D003958 ORTHO05D015143 4.6e-39 166.0 102 76.5
FAN05G2568 Fragaria x ananassa HOM05D003958 ORTHO05D004864 4.0e-35 152.9 135 60.7
Atru.chr6.2248 Acer truncatum HOM05D003958 ORTHO05D004864 2.4e-32 143.7 93 74.2
Gorai.001G000100 Gossypium raimondii HOM05D003958 ORTHO05D004864 7.1e-32 142.1 84 76.2
C03p32750 Brassica napus HOM05D003958 ORTHO05D004864 1.4e-27 127.9 117 57.3
BolC3t15610H Brassica oleracea HOM05D003958 ORTHO05D004864 1.4e-27 127.9 117 57.3
Gohir.A09G249500 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.0e-22 110.2 64 84.4
Gohir.1Z049410 Gossypium hirsutum HOM05D003958 ORTHO05D004864 6.6e-22 109.0 64 84.4
Gohir.D11G176600 Gossypium hirsutum HOM05D003958 ORTHO05D004864 6.2e-20 102.4 91 54.9
FAN05G2311 Fragaria x ananassa HOM05D003958 ORTHO05D004864 8.1e-20 102.1 105 54.3
CSS0019434 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 1.4e-19 101.3 74 74.3
Gohir.D07G000766 Gossypium hirsutum HOM05D003958 ORTHO05D004864 9.0e-19 98.6 91 56.0
Gorai.013G272500 Gossypium raimondii HOM05D003958 ORTHO05D004864 4.5e-18 96.3 91 54.9
Oeu056467.1 Olea europaea HOM05D003958 ORTHO05D004864 5.8e-18 95.9 230 30.9
Gohir.D08G275100 Gossypium hirsutum HOM05D003958 ORTHO05D005872 6.4e-17 92.4 50 84.0
Gorai.N025700 Gossypium raimondii HOM05D003958 ORTHO05D005872 6.4e-17 92.4 50 84.0
Solyc06g053690.3 Solanum lycopersicum HOM05D003958 ORTHO05D004864 8.4e-17 92.0 62 67.7
Gorai.007G000600 Gossypium raimondii HOM05D001392 ORTHO05D014312 1.4e-16 91.3 72 65.3
Gohir.1Z049564 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.9e-16 90.9 50 82.0
Gohir.1Z049570 Gossypium hirsutum HOM05D003958 ORTHO05D005872 1.9e-16 90.9 50 82.0
Gohir.A02G000100 Gossypium hirsutum HOM05D003958 ORTHO05D005454 4.2e-16 89.7 47 83.0
Nitab4.5_0001556g0020 Nicotiana tabacum HOM05D003958 ORTHO05D004864 2.3e-14 84.0 81 55.6
BcaC03g13467 Brassica carinata HOM05D002486 ORTHO05D002606 2.1e-12 77.4 153 37.9
AL4G39060 Arabidopsis lyrata HOM05D000001 ORTHO05D009069 6.9e-11 72.4 124 39.5
Medtr2g014570 Medicago truncatula HOM05D003958 ORTHO05D004864 3.4e-10 70.1 57 66.7
QL05p086362 Quercus lobata HOM05D003958 ORTHO05D044828 1.9e-08 64.3 46 65.2
QL05p086256 Quercus lobata HOM05D000045 ORTHO05D004773 5.5e-08 62.8 35 77.1


User provided reference genes

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