Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G032600 Carya illinoinensis HOM05D007804 ORTHO05D009828 2.8e-106 388.7 201 100.0
Cfa007487 Carpinus fangiana HOM05D007804 ORTHO05D009828 6.4e-50 201.4 209 62.7
QL02p079311 Quercus lobata HOM05D007804 ORTHO05D009828 7.0e-41 171.4 198 58.6
Prupe.3G275600 Prunus persica HOM05D007804 ORTHO05D009828 7.6e-27 124.8 181 47.5
Duzib147G0590 Durio zibethinus HOM05D007804 ORTHO05D009828 1.4e-25 120.6 192 44.3
Manes.15G177500 Manihot esculenta HOM05D007804 ORTHO05D009828 9.2e-25 117.9 177 45.8
Manes.17G117500 Manihot esculenta HOM05D007804 ORTHO05D009828 2.1e-24 116.7 166 47.6
Manes.17G120501 Manihot esculenta HOM05D007804 ORTHO05D009828 5.1e-23 112.1 161 44.7
Gohir.D09G022600 Gossypium hirsutum HOM05D007804 ORTHO05D009828 6.6e-23 111.7 164 48.8
Cpa.g.sc14.66 Carica papaya HOM05D007804 ORTHO05D009828 2.1e-21 106.7 161 45.3
Ciclev10012771m.g Citrus clementina HOM05D007804 ORTHO05D009828 2.8e-21 106.3 196 41.8
Gohir.A09G023300 Gossypium hirsutum HOM05D007804 ORTHO05D009828 4.7e-21 105.5 189 40.7
Gorai.006G026600 Gossypium raimondii HOM05D007804 ORTHO05D009828 8.1e-21 104.8 187 44.9
Thecc.04G069800 Theobroma cacao HOM05D007804 ORTHO05D009828 1.1e-20 104.4 156 48.1
COL.COLO4_36996 Corchorus olitorius HOM05D007804 ORTHO05D009828 2.4e-20 103.2 170 45.3
FAN05G0497 Fragaria x ananassa HOM05D007804 ORTHO05D009828 1.5e-19 100.5 164 45.7
RcHm_v2.0_Chr2g0169751 Rosa chinensis HOM05D007804 ORTHO05D009828 1.5e-19 100.5 174 45.4
FvH4_6g49720 Fragaria vesca HOM05D007804 ORTHO05D009828 3.4e-19 99.4 164 45.1
FAN14G3729 Fragaria x ananassa HOM05D007804 ORTHO05D009828 3.4e-19 99.4 164 45.1
FAN02G3435 Fragaria x ananassa HOM05D007804 ORTHO05D009828 7.6e-19 98.2 164 43.9
Phvul.004G023300 Phaseolus vulgaris HOM05D007804 ORTHO05D009828 2.9e-18 96.3 185 40.5
Lj2g0027470 Lotus japonicus HOM05D007804 ORTHO05D009828 6.4e-18 95.1 169 45.6
Medtr6g009320 Medicago truncatula HOM05D007804 ORTHO05D009828 6.4e-18 95.1 211 35.1
FAN09G3343 Fragaria x ananassa HOM05D007804 ORTHO05D009828 1.1e-17 94.4 172 44.2
Nitab4.5_0002265g0080 Nicotiana tabacum HOM05D007804 ORTHO05D009828 3.2e-17 92.8 158 41.1
Nitab4.5_0001239g0070 Nicotiana tabacum HOM05D007804 ORTHO05D009828 5.4e-17 92.0 161 40.4
SGA_v2.0_scaffold135G34801 Striga asiatica HOM05D007804 ORTHO05D009828 7.1e-17 91.7 154 43.5
Migut.K01348 Erythranthe guttata HOM05D007804 ORTHO05D009828 1.6e-16 90.5 160 40.6
Nn3g17058 Nelumbo nucifera HOM05D007804 ORTHO05D009828 1.6e-16 90.5 187 39.6
VMungo0464G0276 Vigna mungo HOM05D007804 ORTHO05D009828 1.6e-16 90.5 188 38.3
Glyma.13G067400 Glycine max HOM05D007804 ORTHO05D009828 3.5e-16 89.4 186 37.1
MSTRG.23968 Avicennia marina HOM05D007804 ORTHO05D009828 7.8e-16 88.2 155 40.6
ClCG09G018550 Citrullus lanatus HOM05D007804 ORTHO05D009828 1.0e-15 87.8 159 41.5
Rhsim08G0063700 Rhododendron simsii HOM05D007804 ORTHO05D009828 1.3e-15 87.4 159 42.8
Glyma.19G017000 Glycine max HOM05D007804 ORTHO05D009828 1.7e-15 87.0 181 37.6
Peaxi162Scf00129g00628 Petunia axillaris HOM05D007804 ORTHO05D009828 5.1e-15 85.5 170 38.2
Psat1g077320 Pisum sativum HOM05D007804 ORTHO05D009828 5.1e-15 85.5 214 32.2
CSS0004616 Camellia sinensis var. sinensis HOM05D007804 ORTHO05D009828 1.9e-14 83.6 165 40.6
Sed0002452 Sechium edule HOM05D007804 ORTHO05D009828 1.9e-14 83.6 172 35.5
Actinidia02723 Actinidia chinensis HOM05D007804 ORTHO05D009828 2.5e-14 83.2 159 38.4
MELO3C021487.2 Cucumis melo HOM05D007804 ORTHO05D009828 3.3e-14 82.8 156 40.4
Lalb_Chr21g0319161 Lupinus albus HOM05D007804 ORTHO05D009828 5.6e-14 82.0 165 37.6
Aa31LG2G4650 Aethionema arabicum HOM05D007804 ORTHO05D009828 9.6e-14 81.3 197 35.0
Sopen02g032190 Solanum pennellii HOM05D007804 ORTHO05D009828 1.6e-13 80.5 157 38.9
SalBow1G7839 Salvia bowleyana HOM05D007804 ORTHO05D009828 2.1e-13 80.1 161 39.1
TPR.G32605 Trifolium pratense HOM05D007804 ORTHO05D009828 2.1e-13 80.1 204 32.8
Migut.H00872 Erythranthe guttata HOM05D007804 ORTHO05D009828 2.8e-13 79.7 165 38.8
CsaV3_5G037680 Cucumis sativus L. HOM05D007804 ORTHO05D009828 3.6e-13 79.3 162 35.8
Solyc02g087440.4 Solanum lycopersicum HOM05D007804 ORTHO05D009828 3.6e-13 79.3 158 40.5
THA.LOC104805425 Tarenaya hassleriana HOM05D007804 ORTHO05D009828 3.6e-13 79.3 238 32.8
unitig_899.g15501 Utricularia gibba HOM05D007804 ORTHO05D009828 1.1e-12 77.8 156 39.1
Sed0004613 Sechium edule HOM05D007804 ORTHO05D009828 1.4e-12 77.4 168 35.1
Sed0005835 Sechium edule HOM05D007804 ORTHO05D009828 1.4e-12 77.4 168 35.1
Oeu017303.1 Olea europaea HOM05D007804 ORTHO05D009828 2.4e-12 76.6 162 40.7
Thhalv10004896m.g Eutrema salsugineum HOM05D007804 ORTHO05D009828 4.0e-12 75.9 201 33.3
Psat1g077160 Pisum sativum HOM05D007804 ORTHO05D009828 4.0e-12 75.9 218 31.2
A02p35930 Brassica napus HOM05D007804 ORTHO05D009828 9.0e-12 74.7 178 37.1
A06p40550 Brassica napus HOM05D007804 ORTHO05D009828 9.0e-12 74.7 177 35.6
BraA06t26974Z Brassica rapa HOM05D007804 ORTHO05D009828 9.0e-12 74.7 177 35.0
Lalb_Chr02g0159931 Lupinus albus HOM05D007804 ORTHO05D009828 1.2e-11 74.3 180 33.9
Nn4g22964 Nelumbo nucifera HOM05D007804 ORTHO05D009828 1.2e-11 74.3 148 39.9
PGSC0003DMG402001401 Solanum tuberosum HOM05D007804 ORTHO05D009828 1.2e-11 74.3 167 38.9
TWI36G0430 Tripterygium wilfordii HOM05D007804 ORTHO05D009828 1.5e-11 73.9 166 37.3
DCAR_011178 Daucus carota HOM05D007804 ORTHO05D009828 2.6e-11 73.2 166 36.1
BcaC03g17515 Brassica carinata HOM05D007804 ORTHO05D009828 3.4e-11 72.8 180 33.9
C02p54770 Brassica napus HOM05D007804 ORTHO05D009828 3.4e-11 72.8 180 33.9
BolC2t11538H Brassica oleracea HOM05D007804 ORTHO05D009828 3.4e-11 72.8 180 33.9
CARHR292560 Cardamine hirsuta HOM05D007804 ORTHO05D009828 3.4e-11 72.8 200 35.5
BraA02t08592Z Brassica rapa HOM05D007804 ORTHO05D009828 4.5e-11 72.4 178 36.5
Sp2g17190 Schrenkiella parvula HOM05D007804 ORTHO05D009828 4.5e-11 72.4 189 34.9
BcaC06g30917 Brassica carinata HOM05D007804 ORTHO05D009828 1.3e-10 70.9 168 36.3
Lsat_1_v5_gn_4_180340 Lactuca sativa HOM05D007804 ORTHO05D009828 2.2e-10 70.1 158 34.8
BcaC06g33740 Brassica carinata HOM05D007804 ORTHO05D009828 2.9e-10 69.7 169 36.7
Hma1.2p1_0375F.1_g138910 Hydrangea macrophylla HOM05D007804 ORTHO05D009828 2.9e-10 69.7 152 33.6
BcaB07g30130 Brassica carinata HOM05D007804 ORTHO05D009828 4.9e-10 68.9 186 33.9
CAN.G206.83 Capsicum annuum HOM05D007804 ORTHO05D009828 4.9e-10 68.9 172 34.9
BolC7t44259H Brassica oleracea HOM05D000068 ORTHO05D009828 6.4e-10 68.6 183 34.4
C07p37470 Brassica napus HOM05D000068 ORTHO05D009828 8.4e-10 68.2 175 34.9
Carub.0005s0691 Capsella rubella HOM05D007804 ORTHO05D009828 1.1e-09 67.8 175 36.6
ECA232G1800 Erigeron canadensis HOM05D007804 ORTHO05D009828 1.4e-09 67.4 162 34.0
Atru.chr8.2473 Acer truncatum HOM05D007804 ORTHO05D009828 1.9e-09 67.0 193 34.7
TAR622G0153 Trochodendron aralioides HOM05D007804 ORTHO05D009828 3.2e-09 66.2 167 32.9
AL5G18030 Arabidopsis lyrata HOM05D007804 ORTHO05D009828 5.4e-09 65.5 183 32.8
Oeu027756.1 Olea europaea HOM05D007804 ORTHO05D009828 5.4e-09 65.5 148 35.1
AT3G28420 Arabidopsis thaliana HOM05D007804 ORTHO05D009828 1.2e-08 64.3 186 31.2
CANSAT64G2887 Cannabis sativa HOM05D007804 ORTHO05D009828 1.5e-06 57.4 167 35.3
TWI12G0170 Tripterygium wilfordii HOM05D007804 ORTHO05D009828 1.9e-06 57.0 59 52.5
Eucgr.I01891 Eucalyptus grandis HOM05D007804 ORTHO05D009828 5.6e-06 55.5 160 34.4


User provided reference genes

Program Settings