Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 1.4e-159 566.2 289 100.0
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 1.1e-138 496.9 286 86.7
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 2.3e-125 452.6 295 80.3
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 1.9e-124 449.5 288 77.8
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 2.1e-123 446.0 286 80.4
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 1.1e-122 443.7 292 78.1
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 9.3e-119 430.6 292 76.0
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 3.3e-116 422.2 292 73.6
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 2.8e-115 419.1 294 71.1
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 1.8e-114 416.4 291 70.4
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 5.3e-114 414.8 294 71.1
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 6.9e-114 414.5 289 75.1
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 3.8e-112 408.7 293 70.0
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 8.4e-112 407.5 296 70.6
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.4e-111 406.0 307 68.4
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 3.2e-111 405.6 292 72.6
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 7.1e-111 404.4 293 71.0
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 1.2e-110 403.7 280 71.4
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 2.1e-110 402.9 286 71.3
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 3.5e-110 402.1 291 72.2
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 4.6e-110 401.7 280 72.9
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 1.0e-109 400.6 289 70.2
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 1.8e-109 399.8 288 70.5
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 1.8e-109 399.8 294 69.4
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 3.9e-109 398.7 284 70.1
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 3.3e-108 395.6 295 68.5
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 1.3e-107 393.7 288 69.4
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 1.6e-107 393.3 295 68.5
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 8.1e-107 391.0 295 68.1
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 3.1e-106 389.0 291 71.5
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 3.1e-106 389.0 235 80.9
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 4.0e-106 388.7 294 69.7
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 4.5e-105 385.2 268 70.9
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 9.9e-105 384.0 281 72.2
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 9.9e-105 384.0 292 69.2
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 1.7e-104 383.3 253 75.1
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 2.2e-104 382.9 296 68.9
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 8.4e-104 380.9 285 68.1
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 8.4e-104 380.9 292 68.8
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 4.2e-103 378.6 295 67.1
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 5.5e-103 378.3 291 70.8
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 9.3e-103 377.5 290 67.6
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 1.3e-101 373.6 296 67.9
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 1.3e-101 373.6 296 67.9
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 1.8e-101 373.2 254 70.9
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 5.1e-101 371.7 285 68.4
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 5.1e-101 371.7 262 71.4
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 1.1e-100 370.5 292 67.1
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 2.5e-100 369.4 283 68.6
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 7.4e-100 367.9 285 65.3
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 7.4e-100 367.9 295 66.1
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 2.8e-99 365.9 292 66.1
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 2.8e-99 365.9 295 66.1
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 4.8e-99 365.2 293 65.9
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 1.1e-98 364.0 326 61.0
Prupe.3G275100 Prunus persica HOM05D006434 ORTHO05D008069 1.1e-98 364.0 271 70.1
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 6.9e-98 361.3 285 64.9
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 2.0e-97 359.8 289 67.8
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 2.6e-97 359.4 289 67.5
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 2.6e-97 359.4 260 68.1
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 1.7e-96 356.7 233 74.2
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 2.2e-96 356.3 284 64.8
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 2.9e-96 355.9 291 65.6
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 4.9e-96 355.1 288 66.3
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 6.5e-96 354.8 293 64.5
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 1.1e-95 354.0 274 64.6
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 1.4e-95 353.6 295 64.7
Thhalv10004634m.g Eutrema salsugineum HOM05D006434 ORTHO05D008069 5.5e-95 351.7 296 64.5
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 1.6e-94 350.1 295 63.7
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 6.0e-94 348.2 268 68.7
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 6.0e-94 348.2 271 68.3
BcaC06g33735 Brassica carinata HOM05D006434 ORTHO05D008069 1.3e-93 347.1 290 64.1
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 3.0e-93 345.9 300 63.7
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 3.0e-93 345.9 300 63.7
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 1.5e-92 343.6 301 59.8
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 1.5e-92 343.6 293 63.8
Sp2g17230 Schrenkiella parvula HOM05D006434 ORTHO05D008069 1.5e-92 343.6 296 63.2
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 2.5e-92 342.8 293 63.8
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 9.7e-92 340.9 232 74.1
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 4.8e-91 338.6 200 79.5
Aa31LG2G4610 Aethionema arabicum HOM05D006434 ORTHO05D008069 1.1e-90 337.4 260 68.5
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 1.1e-90 337.4 289 63.3
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 3.1e-90 335.9 268 64.6
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 3.1e-90 335.9 297 61.3
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 1.5e-89 333.6 248 66.9
MSTRG.23964 Avicennia marina HOM05D006434 ORTHO05D008069 4.5e-89 332.0 273 64.5
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 6.5e-88 328.2 285 59.6
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 6.5e-88 328.2 235 68.9
AT3G28460 Arabidopsis thaliana HOM05D006434 ORTHO05D008069 2.0e-84 316.6 279 64.5
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 4.3e-84 315.5 178 81.5
HPP92_023566 Vanilla planifolia HOM05D006434 ORTHO05D008069 9.7e-84 314.3 287 56.1
Cpa.g.sc14.62 Carica papaya HOM05D006434 ORTHO05D008069 5.3e-82 308.5 175 84.6
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 9.1e-82 307.8 288 57.6
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 1.5e-81 307.0 174 84.5
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.0e-81 306.6 188 78.2
Lj7A404T37 Lonicera japonica HOM05D006434 ORTHO05D008069 3.2e-79 299.3 236 67.8
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.3e-77 293.1 186 76.3
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 5.9e-73 278.5 159 81.1
Zm00001eb215320 Zea mays HOM05D006434 ORTHO05D008069 3.6e-70 269.2 275 54.9
MBI01_g13068_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 1.1e-68 264.2 217 63.1
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 2.0e-68 263.5 200 67.0
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 2.2e-64 250.0 297 48.5
Hund13291 Selenicereus undatus HOM05D006434 ORTHO05D008069 4.4e-60 235.7 232 57.3
SMO171G0075 Selaginella moellendorffii HOM05D006434 ORTHO05D008069 2.7e-57 226.5 185 58.4
Pp3c7_630 Physcomitrium patens HOM05D006434 ORTHO05D008069 4.5e-57 225.7 212 56.1
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis HOM05D006434 ORTHO05D008069 1.5e-55 220.7 179 59.8
Mapoly0140s0031 Marchantia polymorpha HOM05D006434 ORTHO05D008069 4.1e-50 202.6 191 55.0
CBR_g31858 Chara braunii HOM05D006434 ORTHO05D008069 4.1e-42 176.0 236 43.2
PRCOL_00006620 Prasinoderma coloniale HOM05D006434 ORTHO05D008069 2.8e-38 163.3 176 44.9
Cre13.g566300 Chlamydomonas reinhardtii HOM05D006434 ORTHO05D008069 3.1e-37 159.8 170 45.3
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 7.8e-33 145.2 206 43.7
Solyc01g057060.1 Solanum lycopersicum HOM05D006434 ORTHO05D008069 6.6e-32 142.1 99 70.7
Sopen01g021310 Solanum pennellii HOM05D006434 ORTHO05D008069 1.8e-29 134.0 87 75.9
MCO03G139 Micromonas commoda HOM05D006434 ORTHO05D008069 2.3e-29 133.7 120 53.3
SEGI_38692 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 1.2e-28 131.3 99 62.6
TAR371G0222 Trochodendron aralioides HOM05D006434 ORTHO05D008069 1.3e-27 127.9 193 44.0
MD17G1044100 Malus domestica HOM05D006434 ORTHO05D008069 2.5e-23 113.6 60 90.0
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 7.6e-20 102.1 57 77.2
Cpa.g.sc14.61 Carica papaya HOM05D006434 ORTHO05D008069 2.5e-15 87.0 122 50.0
Lsat_1_v5_gn_7_34121 Lactuca sativa HOM05D006434 ORTHO05D008069 2.3e-08 63.9 37 78.4
Lj7A404T38 Lonicera japonica HOM05D006434 ORTHO05D008069 2.8e-06 57.0 35 68.6


User provided reference genes

Program Settings