Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 1.0e-240 836.3 410 100.0
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 6.8e-192 674.1 411 80.5
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 8.3e-190 667.2 411 79.6
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 4.3e-178 628.2 416 76.9
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 6.2e-161 571.2 411 70.8
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 2.4e-160 569.3 411 70.3
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 9.0e-160 567.4 415 69.9
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 1.2e-159 567.0 406 69.7
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 1.5e-159 566.6 410 67.6
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 5.8e-159 564.7 410 67.8
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 1.9e-157 559.7 406 68.7
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 1.9e-157 559.7 406 68.7
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 2.5e-157 559.3 419 68.5
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 6.0e-156 554.7 424 67.0
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 1.1e-154 550.4 411 67.4
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 1.5e-154 550.1 437 63.4
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 4.3e-154 548.5 411 67.9
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 1.6e-153 546.6 410 66.3
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 4.8e-153 545.0 410 66.6
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 1.1e-152 543.9 423 67.4
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 1.1e-152 543.9 410 65.9
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 1.0e-150 537.3 418 66.5
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 1.3e-150 537.0 411 66.7
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 5.0e-150 535.0 411 65.9
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 1.9e-149 533.1 412 66.5
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 1.9e-149 533.1 414 66.7
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 1.9e-149 533.1 414 67.9
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 7.1e-149 531.2 415 66.0
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 7.1e-149 531.2 413 66.6
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 3.5e-148 528.9 414 65.9
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 4.6e-148 528.5 418 63.9
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 7.9e-148 527.7 409 64.3
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 3.0e-147 525.8 408 65.7
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 3.9e-147 525.4 412 65.3
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 5.1e-147 525.0 388 68.3
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 1.5e-146 523.5 412 65.8
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 1.5e-146 523.5 411 65.2
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 2.5e-146 522.7 412 63.8
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 4.3e-146 521.9 410 64.6
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 1.6e-145 520.0 417 63.5
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 2.2e-145 519.6 401 66.8
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 2.8e-145 519.2 374 68.4
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 6.3e-145 518.1 412 64.8
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 6.9e-144 514.6 372 68.5
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 9.0e-144 514.2 413 64.6
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 9.0e-144 514.2 418 63.4
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 1.2e-143 513.8 385 67.0
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 1.5e-143 513.5 347 72.0
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 2.6e-143 512.7 413 64.6
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 4.5e-143 511.9 412 63.1
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 4.5e-143 511.9 375 67.7
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 1.3e-142 510.4 367 68.7
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 6.5e-142 508.1 411 64.0
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 6.5e-142 508.1 367 68.4
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 1.4e-141 506.9 411 63.0
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 2.5e-141 506.1 311 78.8
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 4.2e-141 505.4 389 65.6
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 9.4e-141 504.2 408 65.0
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 1.2e-140 503.8 384 66.4
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 4.6e-140 501.9 378 65.9
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 1.0e-139 500.7 372 65.9
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 1.8e-139 500.0 355 69.0
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 3.0e-139 499.2 347 69.5
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 3.0e-139 499.2 413 64.2
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 3.9e-139 498.8 342 70.8
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 2.5e-138 496.1 410 62.7
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 9.7e-138 494.2 349 68.5
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 2.8e-137 492.7 344 69.8
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 6.3e-137 491.5 385 64.9
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 6.3e-137 491.5 355 67.6
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 6.3e-137 491.5 355 67.6
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 6.3e-137 491.5 373 65.1
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 2.4e-136 489.6 357 67.5
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 9.1e-136 487.6 421 60.3
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 5.9e-135 485.0 387 65.9
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 7.7e-135 484.6 422 60.4
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 1.0e-134 484.2 323 73.1
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 1.7e-134 483.4 355 66.8
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 1.7e-134 483.4 355 66.8
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 1.7e-134 483.4 320 73.1
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 1.1e-133 480.7 344 67.7
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 1.2e-132 477.2 424 58.5
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.2e-132 477.2 343 66.5
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 7.9e-132 474.6 346 67.9
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 3.0e-131 472.6 425 56.9
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 1.1e-128 464.2 418 58.1
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 1.5e-127 460.3 319 70.5
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 2.9e-126 456.1 390 60.8
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 9.4e-125 451.1 345 63.2
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 1.4e-120 437.2 413 57.1
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 3.8e-118 429.1 304 69.1
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 8.5e-118 427.9 345 61.4
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 1.1e-117 427.6 342 62.0
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 2.1e-116 423.3 298 70.5
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 1.8e-115 420.2 316 69.9
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 1.7e-110 403.7 353 60.9
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 9.4e-109 397.9 250 75.6
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 3.6e-108 396.0 391 53.7
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 2.0e-106 390.2 258 72.1
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 4.9e-105 385.6 250 72.4
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 2.3e-102 376.7 345 54.2
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 6.3e-97 358.6 208 80.8
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 4.1e-96 355.9 417 49.6
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 2.7e-95 353.2 315 60.0
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 1.3e-94 350.9 339 58.4
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 3.2e-80 303.1 368 43.5
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 7.8e-79 298.5 359 42.6
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 2.9e-65 253.4 347 39.5
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 7.3e-61 238.8 184 60.9
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 9.6e-45 185.3 127 68.5
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 9.6e-37 158.7 174 46.0
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 6.3e-36 156.0 380 30.8
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 1.2e-34 151.8 160 51.2
TPR.G26199 Trifolium pratense HOM05D006813 ORTHO05D001332 2.6e-34 150.6 89 77.5
SalBow1G7870 Salvia bowleyana HOM05D006813 ORTHO05D008657 4.2e-32 143.3 91 72.5
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 3.3e-29 133.7 96 67.7
Haze_14448 Corylus avellana HOM05D006813 ORTHO05D008657 1.7e-20 104.8 135 51.1
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 1.5e-18 98.2 86 54.7
ECA247G1425 Erigeron canadensis HOM05D006813 ORTHO05D008657 1.1e-16 92.0 53 71.7
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 5.7e-13 79.7 93 48.4


User provided reference genes

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