Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 0.0e+00 1139.8 582 100.0
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 4.4e-269 931.0 597 81.7
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 4.9e-252 874.4 600 76.2
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 6.8e-238 827.4 536 79.5
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 5.8e-237 824.3 594 73.6
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 2.7e-234 815.5 508 81.5
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 2.3e-233 812.4 533 78.6
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 6.6e-233 810.8 600 71.5
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 3.6e-231 805.1 529 79.8
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 1.1e-230 803.5 541 77.3
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 1.2e-229 800.0 419 93.3
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.5e-229 799.7 535 77.4
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 1.1e-224 783.5 526 76.6
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 2.5e-224 782.3 598 70.1
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 1.3e-223 780.0 572 73.3
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 2.1e-223 779.2 524 77.9
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 4.8e-223 778.1 526 76.2
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 4.8e-223 778.1 533 76.9
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 3.1e-222 775.4 543 74.4
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 9.9e-221 770.4 599 69.4
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 8.4e-220 767.3 529 75.8
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 1.4e-219 766.5 527 75.1
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 2.4e-219 765.8 542 74.4
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 2.1e-218 762.7 544 73.5
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 7.9e-218 760.8 519 75.1
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 1.8e-217 759.6 527 73.4
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 2.3e-217 759.2 564 71.5
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 6.7e-217 757.7 552 74.1
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 8.7e-217 757.3 515 76.5
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 1.1e-216 756.9 520 75.2
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 2.8e-215 752.3 541 72.6
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 5.3e-214 748.0 580 70.3
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 2.0e-213 746.1 540 72.4
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 4.5e-213 745.0 576 69.1
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 7.6e-213 744.2 493 77.9
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 2.2e-212 742.7 521 73.1
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 3.8e-212 741.9 546 70.5
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 3.8e-212 741.9 548 70.4
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 4.9e-212 741.5 495 77.6
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 6.5e-212 741.1 529 73.5
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 8.4e-212 740.7 580 69.7
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.1e-211 740.3 565 69.7
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 1.9e-211 739.6 595 68.4
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 7.1e-211 737.6 509 74.7
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 7.1e-211 737.6 521 72.9
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 9.3e-211 737.3 448 81.5
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 9.3e-211 737.3 538 71.0
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 1.2e-210 736.9 548 70.4
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 2.1e-210 736.1 484 77.1
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 3.5e-210 735.3 531 71.9
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.3e-209 733.4 548 70.1
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 1.1e-208 730.3 514 74.1
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 1.9e-208 729.6 536 71.3
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 1.9e-208 729.6 533 72.0
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 2.5e-208 729.2 441 82.8
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 3.3e-208 728.8 532 71.6
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 4.3e-208 728.4 507 74.4
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 1.3e-207 726.9 426 84.3
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 3.7e-207 725.3 529 71.1
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 4.8e-207 724.9 550 69.1
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 8.2e-207 724.2 503 74.4
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 8.2e-207 724.2 526 72.8
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 1.4e-206 723.4 519 73.4
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 1.8e-206 723.0 531 69.9
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 1.8e-206 723.0 514 74.3
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 3.1e-206 722.2 530 72.1
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 1.5e-205 719.9 526 70.7
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 1.5e-205 719.9 531 73.8
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 2.2e-204 716.1 528 71.2
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 2.9e-204 715.7 525 71.4
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 2.9e-204 715.7 527 71.5
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 5.0e-204 714.9 529 71.5
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 1.1e-203 713.8 493 75.7
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 1.4e-203 713.4 437 80.3
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 1.4e-203 713.4 531 69.9
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 2.5e-203 712.6 552 69.0
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 3.2e-203 712.2 533 69.0
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 7.2e-203 711.1 511 72.8
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 1.0e-201 707.2 485 74.2
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 2.3e-201 706.1 496 72.8
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 5.1e-201 704.9 529 69.8
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 6.7e-201 704.5 573 65.8
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 8.7e-201 704.1 521 71.2
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 8.7e-201 704.1 471 76.0
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.9e-200 703.0 507 72.4
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 2.5e-200 702.6 508 72.2
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 4.3e-200 701.8 533 68.5
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 7.4e-200 701.0 575 65.0
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 9.7e-200 700.7 566 66.1
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 2.2e-199 699.5 511 72.8
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 3.7e-199 698.7 566 65.9
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 4.8e-199 698.4 502 71.9
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 6.3e-199 698.0 494 71.3
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 1.1e-198 697.2 414 81.9
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 2.4e-198 696.0 529 69.0
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 5.3e-198 694.9 486 73.9
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 6.9e-198 694.5 412 82.5
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 1.2e-197 693.7 412 83.0
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 1.5e-197 693.3 407 83.0
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 2.0e-197 693.0 522 70.3
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 2.6e-197 692.6 572 65.2
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 3.4e-197 692.2 572 65.0
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 5.0e-196 688.3 425 80.5
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 8.5e-196 687.6 542 67.3
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 7.2e-195 684.5 503 71.0
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 1.6e-194 683.3 546 67.2
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 7.9e-194 681.0 458 75.8
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 2.3e-193 679.5 597 63.5
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 3.0e-193 679.1 573 66.0
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 2.6e-192 676.0 577 62.9
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 4.4e-192 675.2 548 67.7
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 3.7e-191 672.2 411 81.8
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 1.1e-190 670.6 492 70.5
Sed0018926 Sechium edule HOM05D003880 ORTHO05D004959 3.1e-190 669.1 481 73.4
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 4.1e-190 668.7 407 80.3
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 5.3e-190 668.3 591 63.1
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 5.3e-190 668.3 591 63.1
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 5.3e-190 668.3 591 63.1
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 6.9e-190 667.9 552 65.2
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 2.0e-189 666.4 496 69.8
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 2.6e-189 666.0 510 67.8
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 1.0e-188 664.1 483 70.4
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 1.7e-188 663.3 567 62.8
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 2.2e-188 662.9 587 62.4
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 2.2e-188 662.9 587 62.4
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 2.9e-188 662.5 484 70.5
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 5.0e-188 661.8 592 60.8
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 2.7e-186 656.0 592 61.8
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 3.0e-185 652.5 462 72.9
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 6.7e-185 651.4 536 64.6
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 4.8e-183 645.2 491 68.6
Actinidia03514 Actinidia chinensis HOM05D003880 ORTHO05D004959 6.3e-183 644.8 361 87.0
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 1.3e-180 637.1 432 73.8
Oeu004740.1 Olea europaea HOM05D003880 ORTHO05D004959 8.5e-180 634.4 427 76.1
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 4.2e-171 605.5 396 74.7
Nitab4.5_0003010g0030 Nicotiana tabacum HOM05D003880 ORTHO05D004959 4.8e-167 592.0 528 62.5
SEGI_26933 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 1.8e-153 547.0 354 73.7
TAR624G0155 Trochodendron aralioides HOM05D003880 ORTHO05D004959 1.3e-151 540.8 376 73.7
SHI35657 Sapria himalayana HOM05D003880 ORTHO05D004959 3.5e-149 532.7 439 63.1
Pp3c12_15090 Physcomitrium patens HOM05D003880 ORTHO05D004959 3.0e-148 529.6 404 65.8
Mapoly0028s0143 Marchantia polymorpha HOM05D003880 ORTHO05D004959 1.6e-146 523.9 453 61.4
SEGI_09673 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 1.8e-137 493.8 312 74.7
SMO228G0044 Selaginella moellendorffii HOM05D003880 ORTHO05D004959 1.3e-135 487.6 376 66.2
FAN04G1012 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.4e-102 377.9 329 62.3
BraA02t08014Z Brassica rapa HOM05D003880 ORTHO05D004959 3.2e-102 376.7 209 84.2
PRCOL_00007080 Prasinoderma coloniale HOM05D003880 ORTHO05D004959 6.9e-97 359.0 379 50.9
A02p29920 Brassica napus HOM05D003880 ORTHO05D004959 4.5e-96 356.3 197 84.3
BcaNung01810 Brassica carinata HOM05D003880 ORTHO05D004959 9.3e-86 322.0 180 82.8
CSS0041582 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 1.4e-78 298.1 159 87.4
CSS0012164 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 3.2e-78 297.0 156 89.1
CSS0024003 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 3.2e-78 297.0 156 89.1
AagrBONN_evm.TU.Sc2ySwM_344.3442 Anthoceros agrestis HOM05D003880 ORTHO05D004959 4.2e-78 296.6 230 67.8
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.7e-66 258.1 426 40.1
MCO01G353 Micromonas commoda HOM05D003880 ORTHO05D004959 1.7e-63 248.1 363 38.3
HPP92_027627 Vanilla planifolia HOM05D003880 ORTHO05D004959 4.1e-57 226.9 207 62.3
Cre02.g095350 Chlamydomonas reinhardtii HOM05D003880 ORTHO05D004959 5.7e-51 206.5 182 54.9
HPP92_019377 Vanilla planifolia HOM05D003880 ORTHO05D004959 3.7e-50 203.8 128 81.2
BolC8t50393H Brassica oleracea HOM05D003880 ORTHO05D004959 3.8e-47 193.7 184 55.4
Pp3c15_5240 Physcomitrium patens HOM05D003880 ORTHO05D004959 3.3e-46 190.7 285 37.2
BolC5t31452H Brassica oleracea HOM05D003880 ORTHO05D004959 3.0e-44 184.1 109 80.7
BcaB08g34411 Brassica carinata HOM05D003880 ORTHO05D004959 1.4e-36 158.7 155 56.1
Actinidia18360 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.2e-35 155.6 88 81.8
Oeu021226.1 Olea europaea HOM05D003880 ORTHO05D019999 1.5e-35 155.2 99 76.8
Pp3c4_20480 Physcomitrium patens HOM05D003880 ORTHO05D004959 9.8e-35 152.5 110 65.5
BcaB05g25101 Brassica carinata HOM05D003880 ORTHO05D019999 1.4e-33 148.7 125 60.0
C08p27770 Brassica napus HOM05D003880 ORTHO05D004959 9.2e-33 146.0 83 78.3
Mapoly0080s0005 Marchantia polymorpha HOM05D003880 ORTHO05D004959 8.6e-31 139.4 215 35.8
BcaC07g39615 Brassica carinata HOM05D003880 ORTHO05D004959 1.1e-30 139.0 83 73.5
BcaB07g33153 Brassica carinata HOM05D003880 ORTHO05D019999 2.3e-23 114.8 95 61.1
HPP92_027628 Vanilla planifolia HOM05D003880 ORTHO05D019999 1.2e-21 109.0 114 51.8
BcaB02g09679 Brassica carinata HOM05D003880 ORTHO05D019999 8.9e-20 102.8 87 59.8
Oeu004742.1 Olea europaea HOM05D003880 ORTHO05D004959 4.1e-17 94.0 138 43.5
PRCOL_00005076 Prasinoderma coloniale HOM05D003880 ORTHO05D333288 3.3e-14 84.3 175 34.9
Lsat_1_v5_gn_1_10160 Lactuca sativa HOM05D003880 ORTHO05D019999 2.1e-13 81.6 51 82.4
CAN.G308.60 Capsicum annuum HOM05D003880 ORTHO05D000314 4.0e-12 77.4 111 42.3
TAR624G1033 Trochodendron aralioides HOM05D003880 ORTHO05D415972 1.5e-11 75.5 151 39.7
Rhsim01G0139900 Rhododendron simsii HOM05D002321 ORTHO05D006445 5.1e-07 60.5 116 35.3
COL.COLO4_03399 Corchorus olitorius HOM05D003880 ORTHO05D019999 6.6e-07 60.1 32 81.2


User provided reference genes

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