Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G017300 Carya illinoinensis HOM05D008742 ORTHO05D010377 6.8e-159 563.9 282 100.0
QL10p026828 Quercus lobata HOM05D008742 ORTHO05D010377 3.1e-95 352.4 292 63.4
Cfa008115 Carpinus fangiana HOM05D008742 ORTHO05D010377 2.6e-94 349.4 274 65.0
TAR628G0950 Trochodendron aralioides HOM05D008742 ORTHO05D010377 3.5e-70 269.2 295 53.2
Potri.013G102300 Populus trichocarpa HOM05D008742 ORTHO05D010377 4.4e-65 252.3 288 50.3
Ciclev10021221m.g Citrus clementina HOM05D008742 ORTHO05D010377 1.1e-63 247.7 328 45.7
Aqoxy6G00073 Aquilegia oxysepala HOM05D008742 ORTHO05D010377 1.2e-62 244.2 293 47.1
CANSAT25G0509 Cannabis sativa HOM05D008742 ORTHO05D010377 3.9e-61 239.2 274 47.8
PGR042G1068 Punica granatum HOM05D008742 ORTHO05D010377 4.9e-56 222.2 274 47.1
Manes.18G121000 Manihot esculenta HOM05D008742 ORTHO05D010377 4.1e-55 219.2 293 47.1
Eucgr.F02959 Eucalyptus grandis HOM05D008742 ORTHO05D010377 1.0e-53 214.5 276 44.6
Gohir.D13G122200 Gossypium hirsutum HOM05D008742 ORTHO05D010377 1.3e-53 214.2 292 44.2
Sabra13G0088400 Salix brachista HOM05D008742 ORTHO05D010377 8.6e-53 211.5 342 42.4
GSVIVG01025912001 Vitis vinifera HOM05D008742 ORTHO05D010377 5.6e-52 208.8 224 51.3
Gorai.013G136900 Gossypium raimondii HOM05D008742 ORTHO05D010377 7.3e-52 208.4 293 43.7
Thecc.08G171700 Theobroma cacao HOM05D008742 ORTHO05D010377 1.8e-50 203.8 291 41.9
Gohir.A13G118401 Gossypium hirsutum HOM05D008742 ORTHO05D010377 2.6e-49 199.9 296 41.9
MBI03_g14517_MAGBIO Magnolia biondii HOM05D008742 ORTHO05D010377 8.4e-48 194.9 267 44.6
Solyc11g031970.2 Solanum lycopersicum HOM05D008742 ORTHO05D010377 4.1e-47 192.6 286 43.4
Nitab4.5_0001359g0010 Nicotiana tabacum HOM05D008742 ORTHO05D010377 1.6e-46 190.7 289 41.9
MELO3C022199.2 Cucumis melo HOM05D008742 ORTHO05D010377 1.3e-45 187.6 285 41.1
Nitab4.5_0001278g0110 Nicotiana tabacum HOM05D008742 ORTHO05D010377 5.1e-45 185.7 285 41.4
Sopen11g014500 Solanum pennellii HOM05D008742 ORTHO05D010377 8.6e-45 184.9 286 42.7
MSTRG.25490 Avicennia marina HOM05D008742 ORTHO05D010377 1.1e-44 184.5 262 44.7
ClCG08G000630 Citrullus lanatus HOM05D008742 ORTHO05D010377 2.1e-43 180.3 244 42.2
PSO170G1705 Papaver somniferum HOM05D008742 ORTHO05D010377 3.6e-43 179.5 281 39.5
PGSC0003DMG400031182 Solanum tuberosum HOM05D008742 ORTHO05D010377 3.6e-43 179.5 289 39.8
ATR1136G217 Amborella trichopoda HOM05D008742 ORTHO05D010377 8.1e-43 178.3 239 43.9
CsaV3_5G040230 Cucumis sativus L. HOM05D008742 ORTHO05D010377 1.1e-42 177.9 286 40.2
Cpa.g.sc21.53 Carica papaya HOM05D008742 ORTHO05D010377 2.4e-42 176.8 242 44.2
PSO782G1932 Papaver somniferum HOM05D008742 ORTHO05D010377 6.8e-42 175.3 277 40.8
Peaxi162Scf00688g00019 Petunia axillaris HOM05D008742 ORTHO05D010377 9.9e-41 171.4 255 41.6
Cc10_g16420 Coffea canephora HOM05D008742 ORTHO05D010377 2.1e-38 163.7 235 43.0
SalBow7G3290 Salvia bowleyana HOM05D008742 ORTHO05D010377 1.9e-36 157.1 288 38.5
TWI59G0981 Tripterygium wilfordii HOM05D008742 ORTHO05D010377 1.3e-35 154.5 153 51.6
Haze_13917 Corylus avellana HOM05D008742 ORTHO05D010377 8.1e-35 151.8 121 65.3
Migut.C01345 Erythranthe guttata HOM05D008742 ORTHO05D010377 1.8e-34 150.6 294 40.5
Sed0018339 Sechium edule HOM05D008742 ORTHO05D010377 3.8e-32 142.9 272 36.0
Dinv41793 Davidia involucrata HOM05D008742 ORTHO05D010377 5.1e-29 132.5 170 47.1
THA.LOC104815909 Tarenaya hassleriana HOM05D012304 ORTHO05D010377 2.2e-24 117.1 238 31.5
Aa31LG9G12020 Aethionema arabicum HOM05D012304 ORTHO05D010377 1.3e-21 107.8 236 32.2
AL6G43670 Arabidopsis lyrata HOM05D012304 ORTHO05D010377 2.5e-20 103.6 238 31.9
CDE07G1611 Ceratophyllum demersum HOM05D008742 ORTHO05D010377 3.3e-20 103.2 254 31.1
Carub.0006s2851 Capsella rubella HOM05D012304 ORTHO05D010377 1.4e-18 97.8 248 31.0
Thhalv10028904m.g Eutrema salsugineum HOM05D012304 ORTHO05D010377 1.2e-17 94.7 235 29.4
AT4G09970 Arabidopsis thaliana HOM05D012304 ORTHO05D010377 7.6e-17 92.0 237 29.5
Sp6g07500 Schrenkiella parvula HOM05D012304 ORTHO05D010377 7.6e-17 92.0 237 27.8
Duzib177G0721 Durio zibethinus HOM05D008742 ORTHO05D010377 3.5e-14 83.2 88 45.5
SMO236G0128 Selaginella moellendorffii HOM05D008742 ORTHO05D010377 1.3e-13 81.3 230 29.6
BcaB05g23938 Brassica carinata HOM05D012304 ORTHO05D010377 6.7e-13 79.0 268 27.6
Mapoly0060s0075 Marchantia polymorpha HOM05D020309 ORTHO05D010377 3.1e-10 70.1 308 26.3
SGA_v2.0_scaffold24G10618 Striga asiatica HOM05D000065 ORTHO05D000162 2.6e-09 67.0 109 38.5
A02p26830 Brassica napus HOM05D012304 ORTHO05D010377 1.3e-08 64.7 287 24.0
BolSC33t60634H Brassica oleracea HOM05D012304 ORTHO05D010377 1.3e-08 64.7 288 24.0
BraA02t07692Z Brassica rapa HOM05D012304 ORTHO05D010377 3.8e-08 63.2 287 24.7
AagrBONN_evm.TU.Sc2ySwM_368.552 Anthoceros agrestis HOM05D020309 ORTHO05D010377 1.4e-07 61.2 233 26.2
BcaC03g16452 Brassica carinata HOM05D012304 ORTHO05D010377 1.9e-07 60.8 288 25.0
C02p42700 Brassica napus HOM05D012304 ORTHO05D010377 1.9e-07 60.8 288 25.0
Pp3c3_11780 Physcomitrium patens HOM05D020309 ORTHO05D010377 3.2e-07 60.1 282 25.9
Duzib177G0864 Durio zibethinus HOM05D008742 ORTHO05D010377 6.1e-06 55.8 41 61.0


User provided reference genes

Program Settings