Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G012800 Carya illinoinensis HOM05D006511 ORTHO05D007567 5.1e-146 521.2 283 100.0
QL09p001374 Quercus lobata HOM05D006511 ORTHO05D007567 4.1e-103 378.6 282 73.8
Dinv22148 Davidia involucrata HOM05D006511 ORTHO05D007567 8.8e-98 360.9 282 68.8
Cfa008039 Carpinus fangiana HOM05D006511 ORTHO05D007567 3.5e-94 349.0 282 72.0
RcHm_v2.0_Chr6g0249621 Rosa chinensis HOM05D006511 ORTHO05D007567 6.5e-93 344.7 283 65.0
Potri.013G095400 Populus trichocarpa HOM05D006511 ORTHO05D007567 7.2e-92 341.3 282 65.6
FAN19G0686 Fragaria x ananassa HOM05D006511 ORTHO05D007567 8.0e-91 337.8 283 65.0
FvH4_2g00330 Fragaria vesca HOM05D006511 ORTHO05D007567 3.0e-90 335.9 283 64.3
FAN24G0692 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.2e-89 334.0 283 64.3
MD05G1006300 Malus domestica HOM05D006511 ORTHO05D007567 2.8e-88 329.3 272 67.6
Sabra13G0081400 Salix brachista HOM05D006511 ORTHO05D007567 2.4e-87 326.2 281 64.4
Manes.18G109250 Manihot esculenta HOM05D006511 ORTHO05D007567 1.0e-85 320.9 283 64.3
Prupe.8G003600 Prunus persica HOM05D006511 ORTHO05D007567 5.0e-85 318.5 270 66.7
Actinidia29367 Actinidia chinensis HOM05D006511 ORTHO05D007567 1.6e-83 313.5 282 62.1
FAN20G0885 Fragaria x ananassa HOM05D006511 ORTHO05D007567 4.7e-83 312.0 290 60.3
Haze_13990 Corylus avellana HOM05D006511 ORTHO05D007567 8.0e-83 311.2 263 70.3
CSS0025861 Camellia sinensis var. sinensis HOM05D006511 ORTHO05D007567 2.0e-81 306.6 282 59.6
Thecc.08G168400 Theobroma cacao HOM05D006511 ORTHO05D007567 3.4e-81 305.8 279 59.1
Sed0008597 Sechium edule HOM05D006511 ORTHO05D007567 9.8e-81 304.3 289 60.9
TWI12G0802 Tripterygium wilfordii HOM05D006511 ORTHO05D007567 2.4e-79 299.7 263 63.5
TAR636G2957 Trochodendron aralioides HOM05D006511 ORTHO05D007567 2.4e-79 299.7 282 61.3
Phvul.011G215700 Phaseolus vulgaris HOM05D006511 ORTHO05D007567 5.4e-79 298.5 283 58.7
CANSAT56G0749 Cannabis sativa HOM05D006511 ORTHO05D007567 8.0e-75 284.6 282 58.5
Gohir.D08G249200 Gossypium hirsutum HOM05D006511 ORTHO05D007567 6.8e-74 281.6 277 55.6
Gorai.004G265800 Gossypium raimondii HOM05D006511 ORTHO05D007567 8.9e-74 281.2 277 55.6
Psat7g227400 Pisum sativum HOM05D006511 ORTHO05D007567 2.9e-72 276.2 287 53.7
Lsat_1_v5_gn_1_24541 Lactuca sativa HOM05D006511 ORTHO05D007567 4.9e-72 275.4 279 54.1
Nn5g27238 Nelumbo nucifera HOM05D006511 ORTHO05D007567 6.4e-72 275.0 290 52.4
Lj3g0014137 Lotus japonicus HOM05D006511 ORTHO05D007567 3.5e-70 269.2 276 56.9
Sc01g0000050 Simmondsia chinensis HOM05D006511 ORTHO05D007567 3.5e-70 269.2 276 54.7
Hund17299 Selenicereus undatus HOM05D006511 ORTHO05D007567 6.0e-70 268.5 278 54.0
Glyma.12G241400 Glycine max HOM05D006511 ORTHO05D007567 7.8e-70 268.1 263 56.3
THA.LOC104815798 Tarenaya hassleriana HOM05D006511 ORTHO05D007567 1.0e-69 267.7 283 56.5
VMungo1127G0740 Vigna mungo HOM05D006511 ORTHO05D007567 1.7e-69 266.9 324 50.0
TPR.G34175 Trifolium pratense HOM05D006511 ORTHO05D007567 1.5e-68 263.8 290 52.8
PSO384G4286 Papaver somniferum HOM05D006511 ORTHO05D007567 1.9e-68 263.5 278 56.5
arahy.Tifrunner.gnm1.ann1.HN79E8 Arachis hypogaea HOM05D006511 ORTHO05D007567 1.6e-67 260.4 333 47.4
HanXRQChr04g0102481 Helianthus annuus HOM05D006511 ORTHO05D007567 2.8e-67 259.6 279 50.5
ClCG11G008290 Citrullus lanatus HOM05D006511 ORTHO05D007567 1.4e-66 257.3 354 48.0
AT1G33500 Arabidopsis thaliana HOM05D006511 ORTHO05D007567 1.2e-65 254.2 279 52.7
MELO3C008102.2 Cucumis melo HOM05D006511 ORTHO05D007567 1.2e-65 254.2 286 55.6
ECA247G1184 Erigeron canadensis HOM05D006511 ORTHO05D007567 1.2e-65 254.2 272 52.6
HanXRQChr04g0102471 Helianthus annuus HOM05D006511 ORTHO05D007567 2.0e-65 253.4 272 50.7
Rhsim02G0172300 Rhododendron simsii HOM05D006511 ORTHO05D007567 2.0e-65 253.4 270 54.8
Carub.0001s3169 Capsella rubella HOM05D006511 ORTHO05D007567 2.6e-65 253.1 279 52.7
Gohir.A08G228900 Gossypium hirsutum HOM05D006511 ORTHO05D007567 5.8e-65 251.9 274 50.7
CARHR032940 Cardamine hirsuta HOM05D006511 ORTHO05D007567 1.7e-64 250.4 278 51.4
Sp1g28980 Schrenkiella parvula HOM05D006511 ORTHO05D007567 2.9e-64 249.6 279 52.3
DCAR_014062 Daucus carota HOM05D006511 ORTHO05D007567 2.4e-63 246.5 280 52.1
Sopen11g020540 Solanum pennellii HOM05D006511 ORTHO05D007567 3.2e-63 246.1 283 49.8
BcaB03g13696 Brassica carinata HOM05D006511 ORTHO05D007567 3.5e-62 242.7 278 50.0
Solyc11g045100.2 Solanum lycopersicum HOM05D006511 ORTHO05D007567 2.3e-61 240.0 283 47.7
Migut.C01397 Erythranthe guttata HOM05D006511 ORTHO05D007567 3.0e-61 239.6 279 47.7
BcaC05g27802 Brassica carinata HOM05D006511 ORTHO05D007567 2.5e-60 236.5 278 49.3
Atru.chr13.2578 Acer truncatum HOM05D006511 ORTHO05D007567 5.6e-60 235.3 279 51.6
SGA_v2.0_scaffold118G32636 Striga asiatica HOM05D006511 ORTHO05D007567 7.3e-60 235.0 284 48.9
Ca_13616_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 1.2e-59 234.2 296 50.0
Ca_30187_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 1.2e-59 234.2 296 50.0
BraA05t21311Z Brassica rapa HOM05D006511 ORTHO05D007567 1.4e-58 230.7 293 47.4
CsaV3_2G033310 Cucumis sativus L. HOM05D006511 ORTHO05D007567 6.8e-58 228.4 292 50.7
Aa31LG6G7970 Aethionema arabicum HOM05D006511 ORTHO05D007567 2.6e-57 226.5 308 46.8
AUR62038542 Chenopodium quinoa HOM05D006511 ORTHO05D007567 7.6e-57 224.9 261 50.2
PGSC0003DMG401019059 Solanum tuberosum HOM05D006511 ORTHO05D007567 1.3e-56 224.2 266 48.1
BolC5t32531H Brassica oleracea HOM05D006511 ORTHO05D007567 1.7e-56 223.8 303 45.2
FvH4_2g04930 Fragaria vesca HOM05D006511 ORTHO05D007567 2.2e-56 223.4 223 59.6
C05p38000 Brassica napus HOM05D006511 ORTHO05D007567 3.8e-56 222.6 303 45.2
FAN24G3334 Fragaria x ananassa HOM05D006511 ORTHO05D007567 3.2e-55 219.5 223 58.7
MBI15_g27824_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 9.2e-55 218.0 278 47.5
SalBow7G4276 Salvia bowleyana HOM05D006511 ORTHO05D007567 1.2e-54 217.6 331 41.7
Hma1.2p1_1405F.1_g281380 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 2.1e-54 216.9 160 72.5
Thhalv10008295m.g Eutrema salsugineum HOM05D006511 ORTHO05D007567 4.6e-54 215.7 315 43.8
MBI15_g27821_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 8.7e-53 211.5 278 46.4
COL.COLO4_05044 Corchorus olitorius HOM05D006511 ORTHO05D007567 7.3e-52 208.4 209 58.9
FAN20G1821 Fragaria x ananassa HOM05D006511 ORTHO05D007567 9.3e-47 191.4 206 57.3
Aqoxy6G00041 Aquilegia oxysepala HOM05D006511 ORTHO05D007567 1.2e-46 191.0 283 43.5
EL10Ac1g01283 Beta vulgaris HOM05D006511 ORTHO05D007567 6.6e-45 185.3 277 44.0
COL.COLO4_05796 Corchorus olitorius HOM05D006511 ORTHO05D007567 2.8e-43 179.9 352 40.3
HPP92_003819 Vanilla planifolia HOM05D006511 ORTHO05D007567 6.2e-43 178.7 276 38.4
PGR004G0115 Punica granatum HOM05D006511 ORTHO05D007567 8.1e-43 178.3 244 44.3
Cc10_g16070 Coffea canephora HOM05D006511 ORTHO05D007567 4.5e-41 172.6 205 50.7
Ah.13g067720 Amaranthus hybridus HOM05D006511 ORTHO05D007567 9.9e-41 171.4 256 39.8
Eucgr.F04079 Eucalyptus grandis HOM05D006511 ORTHO05D007567 1.1e-39 167.9 125 72.0
Peaxi162Scf00078g01026 Petunia axillaris HOM05D006511 ORTHO05D007567 4.2e-39 166.0 279 40.5
Hma1.2p1_1476F.1_g285820 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 9.3e-39 164.9 164 58.5
Ciclev10023919m.g Citrus clementina HOM05D006511 ORTHO05D007567 3.5e-38 162.9 142 66.9
CDE10G1127 Ceratophyllum demersum HOM05D006511 ORTHO05D007567 7.9e-38 161.8 274 38.7
AUR62013391 Chenopodium quinoa HOM05D006511 ORTHO05D007567 7.9e-38 161.8 230 43.5
Sc01g0000180 Simmondsia chinensis HOM05D006511 ORTHO05D007567 6.7e-37 158.7 128 66.4
arahy.Tifrunner.gnm1.ann1.VJ45CS Arachis hypogaea HOM05D006511 ORTHO05D007567 1.6e-35 154.1 128 66.4
Lj8A308G12 Lonicera japonica HOM05D006511 ORTHO05D007567 4.8e-35 152.5 261 42.5
unitig_749.g13868 Utricularia gibba HOM05D006511 ORTHO05D007567 8.1e-35 151.8 280 38.2
Haze_13992 Corylus avellana HOM05D006511 ORTHO05D007567 4.0e-34 149.4 146 65.1
AL1G47890 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 2.0e-33 147.1 199 44.2
Medtr1g067720 Medicago truncatula HOM05D006511 ORTHO05D007567 2.0e-33 147.1 128 61.7
Nitab4.5_0001489g0030 Nicotiana tabacum HOM05D006511 ORTHO05D007567 9.9e-33 144.8 259 40.9
Medtr1g067710 Medicago truncatula HOM05D006511 ORTHO05D007567 5.5e-31 139.0 129 54.3
ATR1204G001 Amborella trichopoda HOM05D006511 ORTHO05D007567 1.3e-29 134.4 193 41.5
Zm00001eb028220 Zea mays HOM05D006511 ORTHO05D007567 5.1e-29 132.5 234 37.6
arahy.Tifrunner.gnm1.ann1.FKD4F4 Arachis hypogaea HOM05D006511 ORTHO05D007567 4.8e-27 125.9 111 55.9
MSTRG.1607 Avicennia marina HOM05D006511 ORTHO05D007567 2.4e-26 123.6 190 40.5
Cpa.g.sc142.8 Carica papaya HOM05D006511 ORTHO05D007567 4.0e-26 122.9 204 41.7
Lalb_Chr19g0131901 Lupinus albus HOM05D006511 ORTHO05D007567 9.0e-26 121.7 114 55.3
vmacro11027 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 4.5e-25 119.4 159 47.8
Os08g0320300 Oryza sativa ssp. japonica HOM05D006511 ORTHO05D007567 5.8e-25 119.0 139 47.5
Eucgr.F04078 Eucalyptus grandis HOM05D006511 ORTHO05D007567 1.3e-24 117.9 112 55.4
AL1G48040 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 2.5e-23 113.6 116 51.7
Nitab4.5_0000009g0490 Nicotiana tabacum HOM05D006511 ORTHO05D007567 4.2e-23 112.8 279 32.3
Sc01g0000190 Simmondsia chinensis HOM05D006511 ORTHO05D007567 1.2e-22 111.3 100 56.0
Ciclev10023084m.g Citrus clementina HOM05D006511 ORTHO05D007567 5.1e-21 105.9 99 59.6
Nn5g27242 Nelumbo nucifera HOM05D006511 ORTHO05D007567 1.3e-19 101.3 89 56.2
Lalb_Chr19g0131891 Lupinus albus HOM05D006511 ORTHO05D007567 2.2e-19 100.5 101 51.5
COL.COLO4_36458 Corchorus olitorius HOM05D006511 ORTHO05D007567 8.2e-19 98.6 80 70.0
Haze_13997 Corylus avellana HOM05D006511 ORTHO05D007567 8.5e-16 88.6 63 69.8
Haze_13999 Corylus avellana HOM05D006511 ORTHO05D007567 1.9e-15 87.4 54 83.3
Hma1.2p1_1476F.1_g285810 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 2.5e-15 87.0 55 72.7
Duzib116G0864 Durio zibethinus HOM05D006511 ORTHO05D007567 1.5e-12 77.8 128 39.8
Lalb_Chr19g0131881 Lupinus albus HOM05D006511 ORTHO05D007567 4.1e-10 69.7 48 72.9
vmacro11028 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 1.2e-09 68.2 54 59.3
SMO137G0232 Selaginella moellendorffii HOM05D006511 ORTHO05D007567 3.4e-09 66.6 125 28.8
AagrBONN_evm.TU.Sc2ySwM_362.2028 Anthoceros agrestis HOM05D006511 ORTHO05D007567 1.4e-07 61.2 155 27.1
Lsat_1_v5_gn_0_19000 Lactuca sativa HOM05D006511 ORTHO05D007567 2.5e-07 60.5 117 35.0


User provided reference genes

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