Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G007500 Carya illinoinensis HOM05D005159 ORTHO05D006237 3.0e-133 478.8 293 100.0
QL02p054338 Quercus lobata HOM05D005159 ORTHO05D006237 1.6e-65 253.8 313 62.0
Ciclev10012260m.g Citrus clementina HOM05D005159 ORTHO05D006237 3.8e-59 232.6 241 56.4
GSVIVG01036491001 Vitis vinifera HOM05D005159 ORTHO05D006237 1.9e-58 230.3 265 54.3
Haze_14082 Corylus avellana HOM05D005159 ORTHO05D006237 3.5e-57 226.1 273 63.0
Sed0024356 Sechium edule HOM05D005159 ORTHO05D006237 3.3e-55 219.5 215 60.0
Potri.017G108700 Populus trichocarpa HOM05D005159 ORTHO05D006237 1.6e-54 217.2 225 56.0
Dinv33896 Davidia involucrata HOM05D005159 ORTHO05D006237 2.1e-54 216.9 220 58.2
Glyma.13G171200 Glycine max HOM05D005159 ORTHO05D006237 1.1e-53 214.5 133 79.7
Prupe.3G244000 Prunus persica HOM05D005159 ORTHO05D006237 1.1e-53 214.5 265 57.0
Nitab4.5_0001982g0030 Nicotiana tabacum HOM05D005159 ORTHO05D006237 3.1e-53 213.0 189 60.3
Sed0002827 Sechium edule HOM05D005159 ORTHO05D006237 3.1e-53 213.0 190 62.1
MD09G1079700 Malus domestica HOM05D005159 ORTHO05D006237 4.0e-53 212.6 134 80.6
arahy.Tifrunner.gnm1.ann1.MEN3PN Arachis hypogaea HOM05D005159 ORTHO05D006237 5.3e-53 212.2 191 65.4
CsaV3_5G013180 Cucumis sativus L. HOM05D005159 ORTHO05D006237 5.3e-53 212.2 265 49.8
SGA_v2.0_scaffold10G05141 Striga asiatica HOM05D005159 ORTHO05D006237 9.0e-53 211.5 290 46.2
MBI15_g18197_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 1.2e-52 211.1 248 52.0
Glyma.07G204700 Glycine max HOM05D005159 ORTHO05D006237 2.6e-52 209.9 294 48.0
Sabra04G0075100 Salix brachista HOM05D005159 ORTHO05D006237 2.6e-52 209.9 288 47.2
CDE01G0131 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 3.4e-52 209.5 240 53.8
Manes.01G106500 Manihot esculenta HOM05D005159 ORTHO05D006237 3.4e-52 209.5 290 48.6
CDE02G0002 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 5.8e-52 208.8 133 78.2
Nn1g09575 Nelumbo nucifera HOM05D005159 ORTHO05D006237 5.8e-52 208.8 303 49.2
MELO3C020033.2 Cucumis melo HOM05D005159 ORTHO05D006237 7.6e-52 208.4 231 53.2
CANSAT21G0179 Cannabis sativa HOM05D005159 ORTHO05D006237 9.9e-52 208.0 291 49.5
MD17G1070200 Malus domestica HOM05D005159 ORTHO05D006237 1.3e-51 207.6 134 78.4
Migut.K00872 Erythranthe guttata HOM05D005159 ORTHO05D006237 1.7e-51 207.2 133 77.4
Cpa.g.sc70.15 Carica papaya HOM05D005159 ORTHO05D006237 2.2e-51 206.8 300 48.7
Oeu062202.1 Olea europaea HOM05D005159 ORTHO05D006237 2.2e-51 206.8 133 77.4
Nitab4.5_0006224g0050 Nicotiana tabacum HOM05D005159 ORTHO05D006237 2.9e-51 206.5 231 53.7
unitig_61.g26382 Utricularia gibba HOM05D005159 ORTHO05D006237 2.9e-51 206.5 133 78.2
Actinidia36292 Actinidia chinensis HOM05D005159 ORTHO05D006237 3.8e-51 206.1 132 79.5
Phvul.008G006700 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 3.8e-51 206.1 301 46.2
Duzib211G0079 Durio zibethinus HOM05D005159 ORTHO05D006237 6.4e-51 205.3 235 51.5
Sc10g0001500 Simmondsia chinensis HOM05D005159 ORTHO05D006237 8.4e-51 204.9 293 48.1
MSTRG.15424 Avicennia marina HOM05D005159 ORTHO05D006237 1.1e-50 204.5 233 54.1
Ca_13657_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 1.4e-50 204.1 133 75.9
PGSC0003DMG400018775 Solanum tuberosum HOM05D005159 ORTHO05D006237 1.4e-50 204.1 233 52.4
PGR004G1892 Punica granatum HOM05D005159 ORTHO05D006237 9.3e-50 201.4 299 48.8
Eucgr.I02096 Eucalyptus grandis HOM05D005159 ORTHO05D006237 1.2e-49 201.1 339 41.6
Thecc.04G145900 Theobroma cacao HOM05D005159 ORTHO05D006237 1.6e-49 200.7 133 76.7
Medtr4g051625 Medicago truncatula HOM05D005159 ORTHO05D006237 2.7e-49 199.9 271 47.2
TWI32G0838 Tripterygium wilfordii HOM05D005159 ORTHO05D006237 2.7e-49 199.9 301 47.8
Cc08_g12050 Coffea canephora HOM05D005159 ORTHO05D006237 4.6e-49 199.1 133 73.7
Atru.chr11.1725 Acer truncatum HOM05D005159 ORTHO05D006237 6.0e-49 198.7 288 56.9
Ca_26327_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 7.8e-49 198.4 211 54.0
FvH4_6g45790 Fragaria vesca HOM05D005159 ORTHO05D006237 7.8e-49 198.4 292 51.0
FAN09G0042 Fragaria x ananassa HOM05D005159 ORTHO05D006237 7.8e-49 198.4 292 51.0
ClCG11G001130 Citrullus lanatus HOM05D005159 ORTHO05D006237 1.0e-48 198.0 296 48.0
Solyc02g089600.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 1.3e-48 197.6 133 73.7
Medtr8g085800 Medicago truncatula HOM05D005159 ORTHO05D006237 1.7e-48 197.2 133 73.7
Peaxi162Scf00479g00439 Petunia axillaris HOM05D005159 ORTHO05D006237 2.3e-48 196.8 303 42.9
Actinidia18107 Actinidia chinensis HOM05D005159 ORTHO05D006237 3.0e-48 196.4 229 53.3
arahy.Tifrunner.gnm1.ann1.VE7QKQ Arachis hypogaea HOM05D005159 ORTHO05D006237 3.9e-48 196.1 244 53.3
MBI15_g38433_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 8.7e-48 194.9 249 49.8
Gohir.D13G121900 Gossypium hirsutum HOM05D005159 ORTHO05D006237 1.5e-47 194.1 226 53.1
BcaC02g09665 Brassica carinata HOM05D005159 ORTHO05D006237 3.3e-47 193.0 134 70.9
C04p45340 Brassica napus HOM05D005159 ORTHO05D006237 3.3e-47 193.0 134 70.9
BolC4t26116H Brassica oleracea HOM05D005159 ORTHO05D006237 3.3e-47 193.0 134 70.9
BraA04t16828Z Brassica rapa HOM05D005159 ORTHO05D006237 3.3e-47 193.0 134 70.9
THA.LOC104805544 Tarenaya hassleriana HOM05D005159 ORTHO05D006237 4.3e-47 192.6 260 47.3
PSO017G6426 Papaver somniferum HOM05D005159 ORTHO05D006237 5.6e-47 192.2 132 72.7
Sp7g03200 Schrenkiella parvula HOM05D005159 ORTHO05D006237 7.3e-47 191.8 134 70.9
A04p11610 Brassica napus HOM05D005159 ORTHO05D006237 1.3e-46 191.0 134 70.1
Solyc03g046350.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 2.1e-46 190.3 295 46.8
Sopen03g009860 Solanum pennellii HOM05D005159 ORTHO05D006237 2.1e-46 190.3 310 44.5
Hund27686 Selenicereus undatus HOM05D005159 ORTHO05D006237 3.6e-46 189.5 285 44.6
Hund27687 Selenicereus undatus HOM05D005159 ORTHO05D006237 3.6e-46 189.5 285 44.6
Lsat_1_v5_gn_8_24161 Lactuca sativa HOM05D005159 ORTHO05D006237 4.8e-46 189.1 137 72.3
Lju237A1T66 Lonicera japonica HOM05D005159 ORTHO05D006237 1.1e-45 188.0 316 47.8
Potri.004G106900 Populus trichocarpa HOM05D005159 ORTHO05D006237 1.1e-45 188.0 295 48.1
AUR62016605 Chenopodium quinoa HOM05D005159 ORTHO05D006237 1.4e-45 187.6 286 43.7
Medtr1g090650 Medicago truncatula HOM05D005159 ORTHO05D006237 1.8e-45 187.2 133 72.2
PSO478G0642 Papaver somniferum HOM05D005159 ORTHO05D006237 3.1e-45 186.4 206 51.5
TPR.G37714 Trifolium pratense HOM05D005159 ORTHO05D006237 3.1e-45 186.4 262 46.2
Gohir.A13G118100 Gossypium hirsutum HOM05D005159 ORTHO05D006237 4.0e-45 186.0 291 45.0
Psat6g166480 Pisum sativum HOM05D005159 ORTHO05D006237 5.3e-45 185.7 133 70.7
CAN.G497.25 Capsicum annuum HOM05D005159 ORTHO05D006237 6.9e-45 185.3 298 43.6
Aqoxy3G00614 Aquilegia oxysepala HOM05D005159 ORTHO05D006237 9.0e-45 184.9 228 52.6
BcaB06g27239 Brassica carinata HOM05D005159 ORTHO05D006237 2.0e-44 183.7 287 45.3
HanXRQChr03g0078031 Helianthus annuus HOM05D005159 ORTHO05D006237 2.6e-44 183.3 310 42.9
EL10Ac7g16490 Beta vulgaris HOM05D005159 ORTHO05D006237 3.4e-44 183.0 248 47.6
DCAR_026285 Daucus carota HOM05D005159 ORTHO05D006237 3.4e-44 183.0 314 42.7
TAR371G0967 Trochodendron aralioides HOM05D005159 ORTHO05D006237 3.4e-44 183.0 258 47.7
Aa31LG9G16930 Aethionema arabicum HOM05D005159 ORTHO05D006237 4.5e-44 182.6 295 44.1
SalBow1G7987 Salvia bowleyana HOM05D005159 ORTHO05D006237 4.5e-44 182.6 297 46.1
FAN02G2008 Fragaria x ananassa HOM05D005159 ORTHO05D006237 5.8e-44 182.2 289 52.2
Peaxi162Scf01056g00019 Petunia axillaris HOM05D005159 ORTHO05D006237 5.8e-44 182.2 305 43.3
Gorai.013G136600 Gossypium raimondii HOM05D005159 ORTHO05D006237 1.3e-43 181.0 291 44.3
Ah.15g094970 Amaranthus hybridus HOM05D005159 ORTHO05D006237 2.2e-43 180.3 256 46.5
RcHm_v2.0_Chr2g0163971 Rosa chinensis HOM05D005159 ORTHO05D006237 2.2e-43 180.3 307 49.8
Psat7g186040 Pisum sativum HOM05D002527 ORTHO05D002865 2.9e-43 179.9 151 62.3
HPP92_015315 Vanilla planifolia HOM05D005159 ORTHO05D006237 2.9e-43 179.9 133 68.4
Thhalv10028147m.g Eutrema salsugineum HOM05D005159 ORTHO05D006237 7.1e-42 175.3 310 42.6
FAN05G5180 Fragaria x ananassa HOM05D005159 ORTHO05D006237 7.1e-42 175.3 310 47.7
PGSC0003DMG400010100 Solanum tuberosum HOM05D005159 ORTHO05D006237 7.1e-42 175.3 298 40.3
AL7G51700 Arabidopsis lyrata HOM05D005159 ORTHO05D006237 2.1e-41 173.7 231 48.5
BcaC08g44401 Brassica carinata HOM05D005159 ORTHO05D006237 2.7e-41 173.3 135 67.4
AT5G38720 Arabidopsis thaliana HOM05D005159 ORTHO05D006237 3.0e-40 169.9 292 42.8
C06p18340 Brassica napus HOM05D005159 ORTHO05D006237 3.0e-40 169.9 240 46.2
BolC6t37046H Brassica oleracea HOM05D005159 ORTHO05D006237 3.0e-40 169.9 240 46.2
ECA240G3626 Erigeron canadensis HOM05D005159 ORTHO05D006237 3.0e-40 169.9 315 41.0
arahy.Tifrunner.gnm1.ann1.3J3UL0 Arachis hypogaea HOM05D005159 ORTHO05D006237 3.9e-40 169.5 132 70.5
Carub.0007s3714 Capsella rubella HOM05D005159 ORTHO05D006237 5.1e-40 169.1 292 43.5
AUR62011452 Chenopodium quinoa HOM05D005159 ORTHO05D006237 5.1e-40 169.1 301 39.9
AUR62026768 Chenopodium quinoa HOM05D005159 ORTHO05D006237 5.1e-40 169.1 131 64.9
Ah.08g217340 Amaranthus hybridus HOM05D005159 ORTHO05D006237 2.5e-39 166.8 300 43.7
SEGI_21798 Sequoiadendron giganteum HOM05D005159 ORTHO05D006237 4.3e-39 166.0 132 65.2
TAR629G0318 Trochodendron aralioides HOM05D005159 ORTHO05D006237 1.3e-38 164.5 195 50.8
ATR0691G244 Amborella trichopoda HOM05D005159 ORTHO05D006237 3.7e-38 162.9 133 65.4
VMungo1383G3720 Vigna mungo HOM05D005159 ORTHO05D006237 4.8e-38 162.5 293 40.6
CSS0007706 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.1e-37 161.4 157 57.3
CSS0013880 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.1e-37 161.4 203 49.3
CSS0044288 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.1e-37 161.4 157 57.3
Lalb_Chr18g0059201 Lupinus albus HOM05D005159 ORTHO05D006237 1.4e-37 161.0 303 43.9
Lj6g0020881 Lotus japonicus HOM05D005159 ORTHO05D006237 4.0e-37 159.5 271 42.8
Phvul.001G061500 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 4.0e-37 159.5 282 42.6
Sopen02g034320 Solanum pennellii HOM05D005159 ORTHO05D006237 4.5e-36 156.0 133 61.7
Rhsim08G0081100 Rhododendron simsii HOM05D005159 ORTHO05D006237 5.8e-36 155.6 273 42.1
COL.COLO4_37042 Corchorus olitorius HOM05D005159 ORTHO05D006237 1.0e-35 154.8 204 46.6
Os02g0728700 Oryza sativa ssp. japonica HOM05D005159 ORTHO05D006237 4.9e-35 152.5 290 42.1
vmacro18090 Vaccinium macrocarpon HOM05D005159 ORTHO05D006237 2.1e-33 147.1 184 51.6
TPR.G28602 Trifolium pratense HOM05D005159 ORTHO05D006237 3.0e-32 143.3 246 40.7
FAN14G1445 Fragaria x ananassa HOM05D005159 ORTHO05D006237 3.9e-32 142.9 100 76.0
Nn8g41096 Nelumbo nucifera HOM05D005159 ORTHO05D006237 7.4e-31 138.7 231 43.7
Zm00001eb253420 Zea mays HOM05D005159 ORTHO05D006237 9.6e-31 138.3 295 38.0
TAR629G0746 Trochodendron aralioides HOM05D005159 ORTHO05D006237 2.1e-30 137.1 95 72.6
CARHR291790 Cardamine hirsuta HOM05D005159 ORTHO05D006237 6.2e-30 135.6 136 55.9
Pp3c10_24110 Physcomitrium patens HOM05D005159 ORTHO05D006237 6.9e-29 132.1 135 51.9
CSS0028445 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.3e-27 127.9 203 43.8
Mapoly0058s0026 Marchantia polymorpha HOM05D005159 ORTHO05D006237 2.7e-25 120.2 124 49.2
AUR62013504 Chenopodium quinoa HOM05D000258 ORTHO05D006237 3.9e-24 116.3 89 64.0
SMO196G0176 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 5.7e-23 112.5 151 44.4
CBR_g4867 Chara braunii HOM05D005159 ORTHO05D006237 2.9e-19 100.1 133 42.9
MCO13G254 Micromonas commoda HOM05D005159 ORTHO05D006237 1.4e-16 91.3 129 39.5
Lj7A7T32 Lonicera japonica HOM05D005159 ORTHO05D006237 1.8e-16 90.9 250 34.8
arahy.Tifrunner.gnm1.ann1.YDKP0V Arachis hypogaea HOM05D005159 ORTHO05D006237 3.0e-16 90.1 83 61.4
Medtr8g085830 Medicago truncatula HOM05D005159 ORTHO05D006237 1.5e-15 87.8 100 55.0
SMO234G0023 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 4.3e-15 86.3 103 42.7
QL06p007211 Quercus lobata HOM05D005159 ORTHO05D006237 5.7e-15 85.9 57 75.4
AagrBONN_evm.TU.Sc2ySwM_369.363 Anthoceros agrestis HOM05D005159 ORTHO05D006237 1.5e-12 77.8 210 32.4
CBR_g52693 Chara braunii HOM05D005159 ORTHO05D006237 1.6e-09 67.8 132 32.6
Cre01.g052200 Chlamydomonas reinhardtii HOM05D005159 ORTHO05D006237 3.9e-08 63.2 140 35.0
Oeu062205.1 Olea europaea HOM05D005159 ORTHO05D006237 9.7e-07 58.5 136 34.6


User provided reference genes

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