Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G007000 Carya illinoinensis HOM05D002873 ORTHO05D002978 6.9e-17 90.1 67 100.0
Haze_17643 Corylus avellana HOM05D002873 ORTHO05D002978 1.3e-12 75.9 67 64.2
Cfa020560 Carpinus fangiana HOM05D002873 ORTHO05D002978 2.5e-11 71.6 67 59.7
Cfa018418 Carpinus fangiana HOM05D002873 ORTHO05D002978 1.5e-08 62.4 67 70.1
FAN02G0494 Fragaria x ananassa HOM05D002873 ORTHO05D002978 1.5e-08 62.4 66 60.6
Peaxi162Scf00479g00423 Petunia axillaris HOM05D002873 ORTHO05D002978 2.0e-08 62.0 67 67.2
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 2.0e-08 62.0 66 53.0
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 2.0e-08 62.0 66 53.0
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 2.0e-08 62.0 66 53.0
RcHm_v2.0_Chr2g0163991 Rosa chinensis HOM05D002873 ORTHO05D002978 2.6e-08 61.6 67 52.2
FAN05G4367 Fragaria x ananassa HOM05D002873 ORTHO05D002978 3.4e-08 61.2 67 70.1
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 5.8e-08 60.5 66 51.5
Peaxi162Scf00479g00055 Petunia axillaris HOM05D002873 ORTHO05D002978 1.0e-07 59.7 67 50.7
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 1.0e-07 59.7 66 51.5
Migut.H00561 Erythranthe guttata HOM05D002873 ORTHO05D002978 1.3e-07 59.3 67 67.2
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 1.7e-07 58.9 66 50.0
Sabra04G0074600 Salix brachista HOM05D002873 ORTHO05D002978 3.8e-07 57.8 66 66.7
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 3.8e-07 57.8 66 50.0
Actinidia26314 Actinidia chinensis HOM05D002873 ORTHO05D002978 4.9e-07 57.4 67 61.2
Prupe.3G244700 Prunus persica HOM05D002873 ORTHO05D002978 4.9e-07 57.4 63 50.8
Sc11g0008050 Simmondsia chinensis HOM05D002873 ORTHO05D002978 4.9e-07 57.4 67 59.7
Haze_14075 Corylus avellana HOM05D002873 ORTHO05D002978 6.5e-07 57.0 66 47.0
Cfa007988 Carpinus fangiana HOM05D002873 ORTHO05D002978 8.4e-07 56.6 90 44.4
Potri.017G108400 Populus trichocarpa HOM05D002873 ORTHO05D002978 8.4e-07 56.6 66 62.1
CSS0045706 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 1.1e-06 56.2 67 68.7
CSS0047860 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 1.1e-06 56.2 67 68.7
Nitab4.5_0015566g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 1.1e-06 56.2 67 70.1
Oeu049338.1 Olea europaea HOM05D002873 ORTHO05D002978 1.1e-06 56.2 67 73.1
Peaxi162Scf00479g00065 Petunia axillaris HOM05D002873 ORTHO05D002978 1.1e-06 56.2 67 47.8
Peaxi162Scf00479g00427 Petunia axillaris HOM05D002873 ORTHO05D002978 1.1e-06 56.2 67 68.7
Solyc02g065640.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 1.1e-06 56.2 67 68.7
TWI34G1371 Tripterygium wilfordii HOM05D002873 ORTHO05D002978 1.1e-06 56.2 66 47.0
Actinidia18105 Actinidia chinensis HOM05D002873 ORTHO05D002978 1.4e-06 55.8 67 61.2
Cc00_g21590 Coffea canephora HOM05D002873 ORTHO05D002978 1.4e-06 55.8 67 67.2
Dinv33895 Davidia involucrata HOM05D002873 ORTHO05D002978 1.4e-06 55.8 67 55.2
Lalb_Chr04g0258251 Lupinus albus HOM05D002873 ORTHO05D002978 1.4e-06 55.8 63 49.2
MD09G1079600 Malus domestica HOM05D002873 ORTHO05D002978 1.4e-06 55.8 66 50.0
Oeu032858.1 Olea europaea HOM05D002873 ORTHO05D002978 1.9e-06 55.5 67 71.6
Cpa.g.sc188.26 Carica papaya HOM05D002873 ORTHO05D002978 2.5e-06 55.1 63 58.7
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 2.5e-06 55.1 66 57.6
RcHm_v2.0_Chr2g0164011 Rosa chinensis HOM05D002873 ORTHO05D002978 2.5e-06 55.1 66 63.6
Ca_06717_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 4.2e-06 54.3 62 48.4
FvH4_6g45800 Fragaria vesca HOM05D002873 ORTHO05D002978 4.2e-06 54.3 36 77.8
FAN09G4276 Fragaria x ananassa HOM05D002873 ORTHO05D002978 4.2e-06 54.3 36 77.8
FAN14G0065 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.2e-06 54.3 36 77.8
MD17G1070100 Malus domestica HOM05D002873 ORTHO05D002978 4.2e-06 54.3 66 65.2
vmacro18088 Vaccinium macrocarpon HOM05D002873 ORTHO05D002978 4.2e-06 54.3 67 71.6
Dinv33894 Davidia involucrata HOM05D002873 ORTHO05D002978 5.5e-06 53.9 67 46.3
Nitab4.5_0012845g0030 Nicotiana tabacum HOM05D002873 ORTHO05D002978 5.5e-06 53.9 67 62.7
Peaxi162Scf01056g00020 Petunia axillaris HOM05D002873 ORTHO05D002978 5.5e-06 53.9 67 67.2
Solyc02g082990.4 Solanum lycopersicum HOM05D002873 ORTHO05D002978 5.5e-06 53.9 67 59.7
Sopen02g027770 Solanum pennellii HOM05D002873 ORTHO05D002978 5.5e-06 53.9 67 56.7
Sopen02g034300 Solanum pennellii HOM05D002873 ORTHO05D002978 5.5e-06 53.9 67 46.3
Sed0018450 Sechium edule HOM05D002873 ORTHO05D002978 7.1e-06 53.5 66 63.6
PGSC0003DMG400001534 Solanum tuberosum HOM05D002873 ORTHO05D002978 7.1e-06 53.5 67 56.7
Glyma.18G278600 Glycine max HOM05D002873 ORTHO05D002978 9.3e-06 53.1 62 61.3
Peaxi162Scf00019g00065 Petunia axillaris HOM05D002873 ORTHO05D002978 9.3e-06 53.1 36 75.0
Potri.017G108300 Populus trichocarpa HOM05D002873 ORTHO05D002978 9.3e-06 53.1 66 59.1
Potri.017G108350 Populus trichocarpa HOM05D002873 ORTHO05D002978 9.3e-06 53.1 66 59.1


User provided reference genes

Program Settings