Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G006700 Carya illinoinensis HOM05D001568 ORTHO05D004404 2.0e-21 105.1 65 100.0
QL02p053549 Quercus lobata HOM05D001568 ORTHO05D004404 2.4e-14 81.6 58 79.3
Hma1.2p1_0588F.1_g184400 Hydrangea macrophylla HOM05D001568 ORTHO05D004404 4.1e-14 80.9 59 76.3
Manes.02G064800 Manihot esculenta HOM05D001568 ORTHO05D004404 6.9e-14 80.1 58 77.6
Manes.01G107200 Manihot esculenta HOM05D001568 ORTHO05D004404 9.0e-14 79.7 58 75.9
Glyma.18G279700 Glycine max HOM05D001568 ORTHO05D004404 1.3e-12 75.9 58 74.1
Phvul.008G021300 Phaseolus vulgaris HOM05D001568 ORTHO05D004404 1.7e-12 75.5 58 75.9
CiPaw.04G004300 Carya illinoinensis HOM05D001568 ORTHO05D004404 2.9e-12 74.7 55 76.4
Nn3g17638 Nelumbo nucifera HOM05D001568 ORTHO05D004404 2.9e-12 74.7 58 70.7
Nn4g23635 Nelumbo nucifera HOM05D001568 ORTHO05D004404 2.9e-12 74.7 57 71.9
TAR371G0241 Trochodendron aralioides HOM05D001568 ORTHO05D004404 3.8e-12 74.3 58 70.7
TAR622G0735 Trochodendron aralioides HOM05D000764 ORTHO05D002006 3.8e-12 74.3 58 70.7
Eucgr.I02108 Eucalyptus grandis HOM05D001568 ORTHO05D004404 6.5e-12 73.6 59 72.9
Prupe.3G242600 Prunus persica HOM05D001568 ORTHO05D004404 6.5e-12 73.6 59 72.9
Potri.017G109800 Populus trichocarpa HOM05D001568 ORTHO05D004404 8.4e-12 73.2 58 70.7
TAR629G2968 Trochodendron aralioides HOM05D001568 ORTHO05D004404 1.1e-11 72.8 58 69.0
CSS0005518 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D004404 1.9e-11 72.0 59 72.9
CSS0039733 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D004404 1.9e-11 72.0 59 72.9
Lalb_Chr17g0336571 Lupinus albus HOM05D001568 ORTHO05D004404 3.2e-11 71.2 56 71.4
Lj1g0007549 Lotus japonicus HOM05D001568 ORTHO05D004404 4.2e-11 70.9 56 69.6
Medtr7g019160 Medicago truncatula HOM05D001568 ORTHO05D004404 5.5e-11 70.5 56 71.4
Medtr6g016890 Medicago truncatula HOM05D001568 ORTHO05D004404 9.3e-11 69.7 57 63.2
Potri.004G105900 Populus trichocarpa HOM05D001568 ORTHO05D004404 9.3e-11 69.7 57 70.2
Potri.017G109900 Populus trichocarpa HOM05D001568 ORTHO05D004404 9.3e-11 69.7 56 69.6
Glyma.19G042000 Glycine max HOM05D001568 ORTHO05D004404 1.6e-10 68.9 59 69.5
Glyma.13G049300 Glycine max HOM05D001568 ORTHO05D004404 2.1e-10 68.6 58 70.7
Sabra17G0091900 Salix brachista HOM05D001568 ORTHO05D004404 3.5e-10 67.8 56 67.9
Oeu032864.1 Olea europaea HOM05D001568 ORTHO05D004404 4.6e-10 67.4 59 71.2
CAN.G497.17 Capsicum annuum HOM05D001568 ORTHO05D004404 6.1e-10 67.0 58 67.2
Solyc02g089660.2 Solanum lycopersicum HOM05D001568 ORTHO05D004404 6.1e-10 67.0 58 67.2
FvH4_6g45650 Fragaria vesca HOM05D001568 ORTHO05D004404 7.9e-10 66.6 62 66.1
FAN05G3918 Fragaria x ananassa HOM05D001568 ORTHO05D004404 7.9e-10 66.6 62 66.1
FAN14G3562 Fragaria x ananassa HOM05D001568 ORTHO05D004404 7.9e-10 66.6 62 66.1
RcHm_v2.0_Chr2g0163791 Rosa chinensis HOM05D001568 ORTHO05D004404 7.9e-10 66.6 61 67.2
Thecc.04G144700 Theobroma cacao HOM05D001568 ORTHO05D004404 7.9e-10 66.6 62 64.5
COL.COLO4_08509 Corchorus olitorius HOM05D001568 ORTHO05D004404 1.0e-09 66.2 61 65.6
DCAR_010979 Daucus carota HOM05D001568 ORTHO05D004404 1.0e-09 66.2 64 62.5
DCAR_010982 Daucus carota HOM05D001568 ORTHO05D004404 1.0e-09 66.2 64 62.5
Lalb_Chr10g0092401 Lupinus albus HOM05D001568 ORTHO05D004404 1.0e-09 66.2 56 66.1
AUR62008943 Chenopodium quinoa HOM05D001568 ORTHO05D004404 1.8e-09 65.5 62 66.1
Phvul.004G048600 Phaseolus vulgaris HOM05D001568 ORTHO05D004404 1.8e-09 65.5 58 67.2
PGSC0003DMG400010048 Solanum tuberosum HOM05D001568 ORTHO05D004404 1.8e-09 65.5 57 66.7
SalBow1G1780 Salvia bowleyana HOM05D001568 ORTHO05D004404 3.0e-09 64.7 59 62.7
SalBow1G7911 Salvia bowleyana HOM05D001568 ORTHO05D004404 3.0e-09 64.7 59 62.7
TPR.G3300 Trifolium pratense HOM05D001568 ORTHO05D004404 3.9e-09 64.3 58 65.5
Atru.chr8.777 Acer truncatum HOM05D001568 ORTHO05D004404 5.1e-09 63.9 58 69.0
Migut.H00549 Erythranthe guttata HOM05D001568 ORTHO05D004404 1.9e-08 62.0 62 58.1
Cc07_g04900 Coffea canephora HOM05D001568 ORTHO05D004404 1.6e-07 58.9 55 61.8
Lsat_1_v5_gn_3_94821 Lactuca sativa HOM05D001568 ORTHO05D004404 1.6e-07 58.9 66 56.1
Sed0003724 Sechium edule HOM05D001568 ORTHO05D004404 1.6e-07 58.9 63 58.7
arahy.Tifrunner.gnm1.ann1.IG7GQE Arachis hypogaea HOM05D001568 ORTHO05D004404 2.2e-07 58.5 66 59.1
PGSC0003DMG400019661 Solanum tuberosum HOM05D001568 ORTHO05D004404 3.7e-07 57.8 59 61.0
Gohir.D07G077600 Gossypium hirsutum HOM05D001568 ORTHO05D004404 6.3e-07 57.0 66 56.1
Gorai.001G082100 Gossypium raimondii HOM05D001568 ORTHO05D004404 6.3e-07 57.0 66 56.1
Gohir.A07G073000 Gossypium hirsutum HOM05D001568 ORTHO05D004404 8.2e-07 56.6 66 56.1
arahy.Tifrunner.gnm1.ann1.R2NHXZ Arachis hypogaea HOM05D001568 ORTHO05D004404 1.1e-06 56.2 66 56.1
HanXRQChr10g0283701 Helianthus annuus HOM05D001568 ORTHO05D004404 1.8e-06 55.5 66 53.0
ECA246G2394 Erigeron canadensis HOM05D001568 ORTHO05D004404 3.1e-06 54.7 62 54.8
Sed0014020 Sechium edule HOM05D001568 ORTHO05D004404 3.1e-06 54.7 61 59.0
Lsat_1_v5_gn_4_175441 Lactuca sativa HOM05D001568 ORTHO05D004404 9.0e-06 53.1 60 56.7


User provided reference genes

Program Settings