Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G198400 Carya illinoinensis HOM05D006817 ORTHO05D008603 6.2e-239 830.5 446 100.0
Cfa001223 Carpinus fangiana HOM05D006817 ORTHO05D008603 5.0e-180 634.8 416 83.2
Haze_17339 Corylus avellana HOM05D006817 ORTHO05D008603 8.5e-172 607.4 452 74.6
QL08p064576 Quercus lobata HOM05D006817 ORTHO05D008603 1.0e-169 600.5 432 76.9
TAR623G0065 Trochodendron aralioides HOM05D006817 ORTHO05D008603 3.1e-166 589.0 412 78.2
Potri.019G048700 Populus trichocarpa HOM05D006817 ORTHO05D008603 4.3e-155 552.0 412 73.8
Atru.chr12.157 Acer truncatum HOM05D006817 ORTHO05D008603 1.6e-154 550.1 415 74.0
Prupe.2G261900 Prunus persica HOM05D006817 ORTHO05D008603 8.0e-154 547.7 410 72.9
GSVIVG01032704001 Vitis vinifera HOM05D006817 ORTHO05D008603 1.0e-153 547.4 406 74.1
TWI09G1614 Tripterygium wilfordii HOM05D006817 ORTHO05D008603 2.3e-153 546.2 411 73.2
Actinidia00992 Actinidia chinensis HOM05D006817 ORTHO05D008603 5.2e-153 545.0 412 73.1
CSS0030257 Camellia sinensis var. sinensis HOM05D006817 ORTHO05D008603 2.9e-151 539.3 414 72.5
Ciclev10031264m.g Citrus clementina HOM05D006817 ORTHO05D008603 1.4e-150 537.0 420 71.7
Thecc.10G176900 Theobroma cacao HOM05D006817 ORTHO05D008603 1.4e-150 537.0 416 72.8
Migut.F00593 Erythranthe guttata HOM05D006817 ORTHO05D008603 3.5e-149 532.3 412 71.1
Sopen06g015650 Solanum pennellii HOM05D006817 ORTHO05D008603 1.0e-148 530.8 414 71.3
Rhsim09G0184300 Rhododendron simsii HOM05D006817 ORTHO05D008603 1.3e-148 530.4 422 71.1
Gohir.A10G180300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 1.7e-148 530.0 417 71.7
PGR044G0301 Punica granatum HOM05D006817 ORTHO05D008603 2.3e-148 529.6 411 71.8
Gorai.011G210100 Gossypium raimondii HOM05D006817 ORTHO05D008603 5.0e-148 528.5 417 71.9
MD01G1164100 Malus domestica HOM05D006817 ORTHO05D008603 6.6e-148 528.1 410 70.7
Solyc06g050210.3 Solanum lycopersicum HOM05D006817 ORTHO05D008603 1.9e-147 526.6 414 70.8
COL.COLO4_10038 Corchorus olitorius HOM05D006817 ORTHO05D008603 5.6e-147 525.0 416 71.4
vmacro09974 Vaccinium macrocarpon HOM05D006817 ORTHO05D008603 7.3e-147 524.6 407 72.2
Eucgr.J00131 Eucalyptus grandis HOM05D006817 ORTHO05D008603 2.1e-146 523.1 408 70.1
CAN.G169.4 Capsicum annuum HOM05D006817 ORTHO05D008603 2.8e-146 522.7 414 70.3
CsaV3_5G010750 Cucumis sativus L. HOM05D006817 ORTHO05D008603 1.4e-145 520.4 414 69.8
Lj5g0023407 Lotus japonicus HOM05D006817 ORTHO05D008603 1.4e-145 520.4 415 68.9
ClCG07G004850 Citrullus lanatus HOM05D006817 ORTHO05D008603 4.0e-145 518.8 413 70.0
Nn2g10348 Nelumbo nucifera HOM05D006817 ORTHO05D008603 4.0e-145 518.8 407 71.3
Aqoxy4G02362 Aquilegia oxysepala HOM05D006817 ORTHO05D008603 5.2e-145 518.5 413 70.2
Sed0020006 Sechium edule HOM05D006817 ORTHO05D008603 5.2e-145 518.5 414 68.8
FAN01G1353 Fragaria x ananassa HOM05D006817 ORTHO05D008603 8.9e-145 517.7 432 68.8
FAN10G2384 Fragaria x ananassa HOM05D006817 ORTHO05D008603 8.9e-145 517.7 429 69.7
MSTRG.27274 Avicennia marina HOM05D006817 ORTHO05D008603 2.0e-144 516.5 412 70.1
THA.LOC104816518 Tarenaya hassleriana HOM05D006817 ORTHO05D008603 2.6e-144 516.2 407 69.3
MELO3C020113.2 Cucumis melo HOM05D006817 ORTHO05D008603 7.5e-144 514.6 416 69.5
Psat6g035880 Pisum sativum HOM05D006817 ORTHO05D008603 7.5e-144 514.6 412 69.7
Nitab4.5_0011715g0010 Nicotiana tabacum HOM05D006817 ORTHO05D008603 2.2e-143 513.1 414 68.6
Peaxi162Scf00739g00017 Petunia axillaris HOM05D006817 ORTHO05D008603 2.2e-143 513.1 432 66.9
Glyma.19G067100 Glycine max HOM05D006817 ORTHO05D008603 8.3e-143 511.1 405 70.6
TPR.G24539 Trifolium pratense HOM05D006817 ORTHO05D008603 1.1e-142 510.8 412 69.7
arahy.Tifrunner.gnm1.ann1.6QBV89 Arachis hypogaea HOM05D006817 ORTHO05D008603 1.4e-142 510.4 410 67.8
Medtr1g007630 Medicago truncatula HOM05D006817 ORTHO05D008603 2.4e-142 509.6 411 69.1
MBI15_g27349_MAGBIO Magnolia biondii HOM05D006817 ORTHO05D008603 7.0e-142 508.1 451 65.9
Gohir.D10G187300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 4.6e-141 505.4 417 69.8
arahy.Tifrunner.gnm1.ann1.6ZT9VY Arachis hypogaea HOM05D006817 ORTHO05D008603 7.8e-141 504.6 410 67.3
Phvul.001G074700 Phaseolus vulgaris HOM05D006817 ORTHO05D008603 7.8e-141 504.6 411 68.6
Oeu036532.1 Olea europaea HOM05D006817 ORTHO05D008603 5.1e-140 501.9 412 69.2
PSO170G5674 Papaver somniferum HOM05D006817 ORTHO05D008603 1.5e-139 500.4 410 67.8
Sp6g37510 Schrenkiella parvula HOM05D006817 ORTHO05D008603 8.1e-138 494.6 411 67.4
PSO017G6024 Papaver somniferum HOM05D006817 ORTHO05D008603 3.1e-137 492.7 414 67.4
Lj8A57G58 Lonicera japonica HOM05D006817 ORTHO05D008603 8.9e-137 491.1 384 71.4
Thhalv10013352m.g Eutrema salsugineum HOM05D006817 ORTHO05D008603 2.6e-136 489.6 403 66.7
BcaC06g32240 Brassica carinata HOM05D006817 ORTHO05D008603 1.3e-135 487.3 407 67.1
Cc02_g05530 Coffea canephora HOM05D006817 ORTHO05D008603 1.7e-135 486.9 414 68.1
HanXRQChr15g0493791 Helianthus annuus HOM05D006817 ORTHO05D008603 2.9e-135 486.1 409 67.7
A10p30880 Brassica napus HOM05D006817 ORTHO05D008603 1.4e-134 483.8 407 66.6
ECA232G4264 Erigeron canadensis HOM05D006817 ORTHO05D008603 3.2e-134 482.6 415 65.1
C09p71390 Brassica napus HOM05D006817 ORTHO05D008603 4.1e-134 482.3 407 66.8
BolC9t59902H Brassica oleracea HOM05D006817 ORTHO05D008603 1.2e-133 480.7 412 66.3
EL10Ac2g04256 Beta vulgaris HOM05D006817 ORTHO05D008603 1.6e-133 480.3 412 65.5
Sc11g0005730 Simmondsia chinensis HOM05D006817 ORTHO05D008603 1.6e-133 480.3 407 67.1
BraA10t45133Z Brassica rapa HOM05D006817 ORTHO05D008603 7.8e-133 478.0 414 65.7
Ah.16g104230 Amaranthus hybridus HOM05D006817 ORTHO05D008603 8.6e-132 474.6 413 65.1
Lsat_1_v5_gn_9_59361 Lactuca sativa HOM05D006817 ORTHO05D008603 4.3e-131 472.2 413 64.2
Manes.10G004900 Manihot esculenta HOM05D006817 ORTHO05D008603 4.3e-131 472.2 416 65.4
Lalb_Chr22g0360921 Lupinus albus HOM05D006817 ORTHO05D008603 1.1e-129 467.6 403 66.0
FAN03G2834 Fragaria x ananassa HOM05D006817 ORTHO05D008603 1.5e-128 463.8 429 64.3
Dinv21831 Davidia involucrata HOM05D004766 ORTHO05D006159 2.2e-127 459.9 412 66.7
HPP92_019064 Vanilla planifolia HOM05D006817 ORTHO05D008603 2.9e-127 459.5 406 62.6
CDE04G2280 Ceratophyllum demersum HOM05D006817 ORTHO05D008603 4.9e-127 458.8 410 62.9
MD07G1231900 Malus domestica HOM05D006817 ORTHO05D008603 8.4e-127 458.0 366 69.7
ATR0681G057 Amborella trichopoda HOM05D006817 ORTHO05D008603 2.4e-126 456.4 407 63.6
Cpa.g.sc19.86 Carica papaya HOM05D006817 ORTHO05D008603 2.1e-125 453.4 409 64.1
DCAR_014588 Daucus carota HOM05D006817 ORTHO05D008603 1.9e-123 446.8 415 61.9
HanXRQChr08g0222561 Helianthus annuus HOM05D006817 ORTHO05D008603 1.4e-118 430.6 434 58.5
Os12g0112300 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 3.0e-116 422.9 408 60.5
Zm00001eb406320 Zea mays HOM05D006817 ORTHO05D008603 8.7e-116 421.4 405 59.0
AUR62012358 Chenopodium quinoa HOM05D006817 ORTHO05D008603 2.4e-113 413.3 407 60.4
Aa31LG11G6330 Aethionema arabicum HOM05D006817 ORTHO05D008603 1.4e-110 404.1 424 57.5
CANSAT56G1261 Cannabis sativa HOM05D006817 ORTHO05D008603 1.9e-110 403.7 390 64.1
SGA_v2.0_scaffold44G16643 Striga asiatica HOM05D006817 ORTHO05D008603 6.7e-108 395.2 414 57.2
AUR62003430 Chenopodium quinoa HOM05D006817 ORTHO05D008603 8.7e-108 394.8 431 56.4
FvH4_7g25670 Fragaria vesca HOM05D006817 ORTHO05D008603 4.9e-103 379.0 348 64.7
Sabra19G0058300 Salix brachista HOM05D000055 ORTHO05D000057 1.6e-101 374.0 382 59.4
Ca_12776_v3 Cicer arietinum L. HOM05D006817 ORTHO05D008603 4.8e-98 362.5 329 64.7
RcHm_v2.0_Chr1g0371891 Rosa chinensis HOM05D006817 ORTHO05D008603 2.7e-93 346.7 277 70.0
AT5G05310 Arabidopsis thaliana HOM05D006817 ORTHO05D008603 2.5e-91 340.1 292 64.7
CARHR207930 Cardamine hirsuta HOM05D006817 ORTHO05D008603 4.8e-90 335.9 259 68.7
Pp3c22_2490 Physcomitrium patens HOM05D006817 ORTHO05D008603 3.2e-78 296.6 371 50.1
VMungo0647G0362 Vigna mungo HOM05D006817 ORTHO05D008603 3.6e-77 293.1 253 66.8
MD05G1328700 Malus domestica HOM05D006817 ORTHO05D008603 6.1e-69 265.8 248 63.7
QL10p038395 Quercus lobata HOM05D006817 ORTHO05D008603 1.2e-64 251.5 182 74.7
AUR62031486 Chenopodium quinoa HOM05D006817 ORTHO05D008603 5.5e-62 242.7 410 44.1
unitig_46.g18743 Utricularia gibba HOM05D006817 ORTHO05D008603 8.0e-61 238.8 335 46.3
Carub.0006s0424 Capsella rubella HOM05D006817 ORTHO05D008603 3.5e-56 223.4 197 65.5
QL05p063879 Quercus lobata HOM05D006817 ORTHO05D008603 2.6e-51 207.2 170 68.8
SEGI_05100 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 9.5e-38 162.2 136 61.0
QL03p030054 Quercus lobata HOM05D006817 ORTHO05D008603 2.8e-37 160.6 95 88.4
QL06p040335 Quercus lobata HOM05D006817 ORTHO05D008603 6.8e-36 156.0 107 79.4
SEGI_41528 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 6.8e-36 156.0 167 55.7
Nitab4.5_0000109g0530 Nicotiana tabacum HOM05D006817 ORTHO05D008603 2.2e-34 151.0 123 69.1
QL09p047975 Quercus lobata HOM05D000176 ORTHO05D000106 1.1e-33 148.7 107 76.6
FvH4_7g25690 Fragaria vesca HOM05D006817 ORTHO05D008603 2.1e-29 134.4 90 77.8
VMungo0647G0650 Vigna mungo HOM05D006817 ORTHO05D008603 2.0e-27 127.9 83 78.3
QL10p065865 Quercus lobata HOM05D006817 ORTHO05D008603 6.4e-26 122.9 88 75.0
FAN06G4794 Fragaria x ananassa HOM05D006817 ORTHO05D008603 7.1e-25 119.4 77 79.2
RcHm_v2.0_Chr1g0371881 Rosa chinensis HOM05D006817 ORTHO05D008603 7.8e-24 115.9 75 78.7
MSTRG.24128 Avicennia marina HOM05D006817 ORTHO05D008603 2.8e-21 107.5 64 81.2
Os11g0112900 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 6.8e-20 102.8 104 57.7
Cre08.g361000 Chlamydomonas reinhardtii HOM05D006817 ORTHO05D008603 7.1e-17 92.8 412 26.7
FAN06G1140 Fragaria x ananassa HOM05D006817 ORTHO05D008603 5.6e-14 83.2 59 76.3
MD17G1183400 Malus domestica HOM05D006817 ORTHO05D008603 1.8e-12 78.2 57 70.2
MD07G1231800 Malus domestica HOM05D006817 ORTHO05D008603 2.2e-10 71.2 61 60.7
Hund15836 Selenicereus undatus HOM05D006817 ORTHO05D008603 1.2e-08 65.5 44 75.0
Oeu020109.1 Olea europaea HOM05D006817 ORTHO05D008603 1.0e-07 62.4 65 53.8


User provided reference genes

Program Settings