Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G197600 Carya illinoinensis HOM05D009452 ORTHO05D015549 2.2e-94 349.0 180 100.0
Haze_17329 Corylus avellana HOM05D009452 ORTHO05D010466 4.7e-36 155.2 191 52.4
Cfa001234 Carpinus fangiana HOM05D009452 ORTHO05D010466 4.4e-34 148.7 180 52.2
QL08p064335 Quercus lobata HOM05D009452 ORTHO05D015549 4.4e-26 122.1 193 43.0
Prupe.2G260200 Prunus persica HOM05D015621 ORTHO05D015549 6.8e-19 98.2 203 38.9
Manes.07G138900 Manihot esculenta HOM05D009452 ORTHO05D010466 3.4e-18 95.9 129 47.3
Duzib106G0033 Durio zibethinus HOM05D009452 ORTHO05D010466 1.1e-16 90.9 139 45.3
Duzib128G1431 Durio zibethinus HOM05D009452 ORTHO05D010466 3.0e-14 82.8 175 37.7
Haze_17327 Corylus avellana HOM05D009452 ORTHO05D015549 3.3e-13 79.3 121 46.3
TWI53G1543 Tripterygium wilfordii HOM05D009452 ORTHO05D010466 5.6e-13 78.6 126 42.1
GSVIVG01032717001 Vitis vinifera HOM05D009452 ORTHO05D010466 9.5e-13 77.8 145 38.6
Gohir.A05G280100 Gossypium hirsutum HOM05D009452 ORTHO05D010466 1.6e-12 77.0 132 39.4
Thecc.10G173600 Theobroma cacao HOM05D009452 ORTHO05D010466 6.2e-12 75.1 120 43.3
THA.LOC104824352 Tarenaya hassleriana HOM05D010126 ORTHO05D010466 1.8e-11 73.6 137 40.1
MD01G1162300 Malus domestica HOM05D015621 ORTHO05D015549 2.3e-11 73.2 192 34.9
MD07G1230300 Malus domestica HOM05D015621 ORTHO05D015549 2.3e-11 73.2 201 35.8
Gorai.009G295300 Gossypium raimondii HOM05D009452 ORTHO05D010466 3.1e-11 72.8 105 43.8
Gohir.D05G281900 Gossypium hirsutum HOM05D009452 ORTHO05D010466 4.0e-11 72.4 135 37.8
Cpa.g.sc19.95 Carica papaya HOM05D010126 ORTHO05D010466 5.2e-11 72.0 153 36.6
Eucgr.G03118 Eucalyptus grandis HOM05D009452 ORTHO05D010466 5.2e-11 72.0 179 36.3
Potri.019G055900 Populus trichocarpa HOM05D009452 ORTHO05D010466 6.8e-11 71.6 124 45.2
PGR142G1927 Punica granatum HOM05D009452 ORTHO05D010466 8.9e-11 71.2 192 31.8
TWI73G1136 Tripterygium wilfordii HOM05D009452 ORTHO05D010466 1.2e-10 70.9 171 35.7
CANSAT56G1042 Cannabis sativa HOM05D015621 ORTHO05D015549 2.9e-09 66.2 189 31.2
MBI15_g33037_MAGBIO Magnolia biondii HOM05D009452 ORTHO05D010466 8.3e-09 64.7 196 33.2
FAN03G1751 Fragaria x ananassa HOM05D015621 ORTHO05D015549 1.9e-08 63.5 126 35.7
Glyma.14G053800 Glycine max HOM05D010487 ORTHO05D011788 2.4e-08 63.2 196 35.2
COL.COLO4_38187 Corchorus olitorius HOM05D009452 ORTHO05D010466 3.2e-08 62.8 81 48.1
Atru.chr12.144 Acer truncatum HOM05D060625 ORTHO05D010466 7.0e-08 61.6 108 38.0
Nn2g11084 Nelumbo nucifera HOM05D025597 ORTHO05D010466 7.0e-08 61.6 197 33.5
FAN01G0195 Fragaria x ananassa HOM05D015621 ORTHO05D015549 9.2e-08 61.2 126 34.9
FAN06G2805 Fragaria x ananassa HOM05D015621 ORTHO05D015549 9.2e-08 61.2 126 34.9
Potri.013G083700 Populus trichocarpa HOM05D009452 ORTHO05D010466 9.2e-08 61.2 131 41.2
Ciclev10033088m.g Citrus clementina HOM05D009452 ORTHO05D010466 1.2e-07 60.8 110 37.3
FvH4_7g25540 Fragaria vesca HOM05D015621 ORTHO05D015549 2.0e-07 60.1 126 34.9
RcHm_v2.0_Chr1g0371541 Rosa chinensis HOM05D015621 ORTHO05D015549 2.7e-07 59.7 128 35.9
Gohir.D05G317251 Gossypium hirsutum HOM05D009452 ORTHO05D010466 6.0e-07 58.5 89 43.8
Aa31LG10G11160 Aethionema arabicum HOM05D010126 ORTHO05D010466 3.9e-06 55.8 182 29.7
Manes.10G006100 Manihot esculenta HOM05D009452 ORTHO05D010466 3.9e-06 55.8 86 39.5
Lalb_Chr17g0347061 Lupinus albus HOM05D010487 ORTHO05D011788 5.0e-06 55.5 224 31.7
Sc11g0005670 Simmondsia chinensis HOM05D017273 ORTHO05D019523 5.0e-06 55.5 136 32.4
Zm00001eb404900 Zea mays HOM05D040567 ORTHO05D025989 5.0e-06 55.5 188 28.7
CSS0035018 Camellia sinensis var. sinensis HOM05D016735 ORTHO05D012140 6.6e-06 55.1 71 46.5


User provided reference genes

Program Settings