Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G197300 Carya illinoinensis HOM05D002744 ORTHO05D008989 1.8e-102 375.9 192 100.0
Haze_17321 Corylus avellana HOM05D002744 ORTHO05D008989 6.6e-89 330.9 192 87.0
QL08p064284 Quercus lobata HOM05D002744 ORTHO05D008989 5.8e-85 317.8 191 85.3
Ciclev10032836m.g Citrus clementina HOM05D002744 ORTHO05D008989 1.4e-83 313.2 192 81.8
GSVIVG01032723001 Vitis vinifera HOM05D002744 ORTHO05D008989 5.4e-83 311.2 192 81.8
Thecc.10G007100 Theobroma cacao HOM05D002744 ORTHO05D008989 2.5e-80 302.4 192 79.2
Dinv21809 Davidia involucrata HOM05D002744 ORTHO05D008989 4.8e-79 298.1 189 82.0
Gohir.D04G071200 Gossypium hirsutum HOM05D002744 ORTHO05D008989 9.0e-78 293.9 192 76.6
Duzib114G0765 Durio zibethinus HOM05D002744 ORTHO05D008989 1.7e-76 289.7 194 76.3
Gohir.A05G332500 Gossypium hirsutum HOM05D002744 ORTHO05D008989 3.8e-76 288.5 194 75.8
PGR142G3983 Punica granatum HOM05D002744 ORTHO05D008989 7.1e-75 284.3 188 77.7
arahy.Tifrunner.gnm1.ann1.HIE7A8 Arachis hypogaea HOM05D002744 ORTHO05D008989 3.5e-74 282.0 192 73.4
Gorai.012G080100 Gossypium raimondii HOM05D002744 ORTHO05D008989 2.3e-73 279.3 204 72.1
RcHm_v2.0_Chr1g0371481 Rosa chinensis HOM05D002744 ORTHO05D008989 5.1e-73 278.1 194 71.1
Glyma.18G022300 Glycine max HOM05D002744 ORTHO05D008989 6.7e-73 277.7 192 72.9
Eucgr.G03110 Eucalyptus grandis HOM05D002744 ORTHO05D008989 5.6e-72 274.6 192 72.9
Glyma.11G234700 Glycine max HOM05D002744 ORTHO05D008989 9.6e-72 273.9 193 72.5
Rhsim09G0182800 Rhododendron simsii HOM05D002744 ORTHO05D008989 9.6e-72 273.9 189 74.6
Sed0024728 Sechium edule HOM05D002744 ORTHO05D008989 2.8e-71 272.3 192 70.8
Actinidia00986 Actinidia chinensis HOM05D002744 ORTHO05D008989 8.2e-71 270.8 193 74.1
arahy.Tifrunner.gnm1.ann1.N80L0Z Arachis hypogaea HOM05D002744 ORTHO05D008989 1.1e-70 270.4 187 71.7
arahy.Tifrunner.gnm1.ann1.B5C26Y Arachis hypogaea HOM05D002744 ORTHO05D008989 1.4e-70 270.0 187 71.7
MD07G1229300 Malus domestica HOM05D002744 ORTHO05D008989 1.4e-70 270.0 191 71.2
Cpa.g.sc19.99 Carica papaya HOM05D002744 ORTHO05D008989 2.4e-70 269.2 184 75.0
MD01G1161400 Malus domestica HOM05D002744 ORTHO05D008989 3.1e-70 268.9 191 70.7
TWI38G2197 Tripterygium wilfordii HOM05D002744 ORTHO05D008989 4.0e-70 268.5 188 73.4
CsaV3_5G010720 Cucumis sativus L. HOM05D002744 ORTHO05D008989 5.3e-70 268.1 194 70.6
Cc02_g05720 Coffea canephora HOM05D002744 ORTHO05D008989 1.5e-69 266.5 188 72.9
Peaxi162Scf00284g00123 Petunia axillaris HOM05D002744 ORTHO05D008989 1.5e-69 266.5 193 72.5
Phvul.001G248100 Phaseolus vulgaris HOM05D002744 ORTHO05D008989 1.5e-69 266.5 192 69.8
Nitab4.5_0000928g0050 Nicotiana tabacum HOM05D002744 ORTHO05D008989 1.7e-68 263.1 192 71.9
Hund13513 Selenicereus undatus HOM05D002744 ORTHO05D008989 1.7e-68 263.1 188 70.2
CANSAT56G2966 Cannabis sativa HOM05D002744 ORTHO05D008989 2.9e-68 262.3 192 68.8
COL.COLO4_25825 Corchorus olitorius HOM05D002744 ORTHO05D006546 2.9e-68 262.3 174 75.9
Manes.10G008400 Manihot esculenta HOM05D002744 ORTHO05D008989 2.9e-68 262.3 189 72.0
Ca_15179_v3 Cicer arietinum L. HOM05D002744 ORTHO05D008989 4.9e-68 261.5 192 67.7
FvH4_7g25501 Fragaria vesca HOM05D002744 ORTHO05D008989 4.9e-68 261.5 192 66.7
FAN06G0491 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.1e-67 260.4 192 66.1
Nn2g11068 Nelumbo nucifera HOM05D002744 ORTHO05D008989 1.9e-67 259.6 190 69.5
FAN10G0428 Fragaria x ananassa HOM05D002744 ORTHO05D006546 2.5e-67 259.2 168 73.8
FAN03G1008 Fragaria x ananassa HOM05D002744 ORTHO05D006546 9.3e-67 257.3 192 66.1
Lj6g0011522 Lotus japonicus HOM05D002744 ORTHO05D008989 1.6e-66 256.5 194 68.0
TPR.G28641 Trifolium pratense HOM05D002744 ORTHO05D008989 2.7e-66 255.8 192 67.7
Potri.008G075600 Populus trichocarpa HOM05D002744 ORTHO05D008989 3.5e-66 255.4 189 72.0
vmacro09984 Vaccinium macrocarpon HOM05D002744 ORTHO05D008989 3.5e-66 255.4 221 64.7
ECA233G4001 Erigeron canadensis HOM05D002744 ORTHO05D008989 4.6e-66 255.0 195 68.2
Hma1.2p1_1240F.1_g269640 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 4.6e-66 255.0 159 81.1
Medtr3g072120 Medicago truncatula HOM05D002744 ORTHO05D008989 7.9e-66 254.2 193 67.9
Carub.0005s2299 Capsella rubella HOM05D002744 ORTHO05D008989 1.3e-65 253.4 190 64.7
AL5G37530 Arabidopsis lyrata HOM05D002744 ORTHO05D008989 2.3e-65 252.7 191 64.4
HanXRQChr17g0560791 Helianthus annuus HOM05D002744 ORTHO05D008989 3.0e-65 252.3 192 68.2
Thhalv10006252m.g Eutrema salsugineum HOM05D002744 ORTHO05D008989 1.5e-64 250.0 191 67.0
DCAR_011891 Daucus carota HOM05D002744 ORTHO05D008989 3.3e-64 248.8 156 79.5
Lalb_Chr08g0231351 Lupinus albus HOM05D002744 ORTHO05D008989 3.3e-64 248.8 189 66.7
Sabra08G0056200 Salix brachista HOM05D002744 ORTHO05D008989 3.3e-64 248.8 189 69.3
AUR62022976 Chenopodium quinoa HOM05D002744 ORTHO05D008989 4.3e-64 248.4 186 67.2
Sopen02g021690 Solanum pennellii HOM05D002744 ORTHO05D008989 5.7e-64 248.1 193 67.9
MSTRG.12212 Avicennia marina HOM05D002744 ORTHO05D008989 7.4e-64 247.7 183 69.9
THA.LOC104824346 Tarenaya hassleriana HOM05D002744 ORTHO05D008989 9.7e-64 247.3 184 66.3
Sp5g06290 Schrenkiella parvula HOM05D002744 ORTHO05D008989 1.6e-63 246.5 191 66.5
EL10Ac2g04293 Beta vulgaris HOM05D002744 ORTHO05D008989 3.7e-63 245.4 187 65.2
Migut.A01076 Erythranthe guttata HOM05D002744 ORTHO05D008989 4.8e-63 245.0 190 67.4
CSS0017108 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 6.3e-63 244.6 160 76.2
BcaB08g34630 Brassica carinata HOM05D002744 ORTHO05D008989 1.1e-62 243.8 191 66.0
Atru.BG.256.p Acer truncatum HOM05D002744 ORTHO05D008989 1.8e-62 243.0 154 81.8
Lju41C22T0 Lonicera japonica HOM05D002744 ORTHO05D008989 4.1e-62 241.9 159 79.2
Lj8C58T1 Lonicera japonica HOM05D002744 ORTHO05D008989 5.3e-62 241.5 159 79.2
AT3G56210 Arabidopsis thaliana HOM05D002744 ORTHO05D008989 1.5e-61 240.0 193 63.2
Nitab4.5_0000263g0100 Nicotiana tabacum HOM05D002744 ORTHO05D008989 4.5e-61 238.4 169 72.8
A09p49190 Brassica napus HOM05D002744 ORTHO05D008989 3.8e-60 235.3 192 64.1
BraA09t40372Z Brassica rapa HOM05D002744 ORTHO05D008989 5.0e-60 235.0 200 62.5
CARHR166360 Cardamine hirsuta HOM05D002744 ORTHO05D008989 1.4e-59 233.4 170 67.6
FAN01G1994 Fragaria x ananassa HOM05D002744 ORTHO05D006546 3.2e-59 232.3 214 56.5
PSO017G6389 Papaver somniferum HOM05D002744 ORTHO05D008989 7.2e-59 231.1 191 58.6
VMungo1383G3724 Vigna mungo HOM05D002744 ORTHO05D008989 3.6e-58 228.8 160 72.5
PSO170G0776 Papaver somniferum HOM05D002744 ORTHO05D008989 1.0e-57 227.3 191 57.6
AUR62012334 Chenopodium quinoa HOM05D002744 ORTHO05D008989 1.8e-57 226.5 153 71.9
SalBow3G4547 Salvia bowleyana HOM05D002744 ORTHO05D008989 1.8e-57 226.5 174 66.7
SGA_v2.0_scaffold36G14267 Striga asiatica HOM05D002744 ORTHO05D008989 5.1e-57 224.9 182 68.1
Oeu026180.1 Olea europaea HOM05D002744 ORTHO05D008989 1.5e-56 223.4 137 81.0
TAR369G0133 Trochodendron aralioides HOM05D000826 ORTHO05D001831 1.5e-56 223.4 147 74.1
Lsat_1_v5_gn_8_13401 Lactuca sativa HOM05D002744 ORTHO05D008989 2.5e-56 222.6 155 72.3
HPP92_013966 Vanilla planifolia HOM05D002744 ORTHO05D008989 8.2e-55 217.6 168 64.3
unitig_32.g11706 Utricularia gibba HOM05D002744 ORTHO05D008989 3.4e-53 212.2 181 62.4
unitig_33.g30211 Utricularia gibba HOM05D002744 ORTHO05D008989 3.4e-53 212.2 181 62.4
Os03g0665800 Oryza sativa ssp. japonica HOM05D002744 ORTHO05D008989 1.3e-52 210.3 164 62.2
ATR0681G046 Amborella trichopoda HOM05D000826 ORTHO05D008989 6.5e-52 208.0 163 66.3
ClCG07G004800 Citrullus lanatus HOM05D002744 ORTHO05D008989 8.5e-52 207.6 194 60.3
C08p31530 Brassica napus HOM05D002744 ORTHO05D008989 2.5e-51 206.1 149 70.5
Hma1.2p1_1240F.1_g269630 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 3.2e-51 205.7 136 77.9
BcaC07g39936 Brassica carinata HOM05D002744 ORTHO05D008989 1.6e-50 203.4 146 70.5
Prupe.2G259500 Prunus persica HOM05D002744 ORTHO05D008989 3.6e-50 202.2 126 81.0
EL10Ac2g04295 Beta vulgaris HOM05D002744 ORTHO05D008989 2.0e-48 196.4 143 69.2
Lj1A963T49 Lonicera japonica HOM05D002744 ORTHO05D008989 5.7e-48 194.9 111 88.3
BcaB01g00016 Brassica carinata HOM05D002744 ORTHO05D008989 2.8e-47 192.6 159 65.4
TAR623G0678 Trochodendron aralioides HOM05D002744 ORTHO05D008989 1.4e-43 180.3 122 77.9
PGSC0003DMG400010239 Solanum tuberosum HOM05D002744 ORTHO05D008989 2.5e-43 179.5 125 75.2
SEGI_09795 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 3.2e-43 179.1 164 57.3
Solyc02g076790.4 Solanum lycopersicum HOM05D002744 ORTHO05D008989 1.6e-42 176.8 125 73.6
Zm00001eb065520 Zea mays HOM05D002744 ORTHO05D008989 1.6e-42 176.8 121 68.6
CDE02G4284 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 2.7e-42 176.0 133 66.9
BolC8t50775H Brassica oleracea HOM05D002744 ORTHO05D008989 6.1e-42 174.9 184 51.6
MELO3C020107.2 Cucumis melo HOM05D002744 ORTHO05D008989 8.0e-42 174.5 194 50.5
BcaB01g00017 Brassica carinata HOM05D002744 ORTHO05D008989 2.3e-41 172.9 174 56.9
Aa31LG10G11120 Aethionema arabicum HOM05D002744 ORTHO05D008989 1.5e-40 170.2 124 69.4
Gohir.A10G240750 Gossypium hirsutum HOM05D002744 ORTHO05D008989 1.8e-38 163.3 124 68.5
Psat5g130160 Pisum sativum HOM05D002744 ORTHO05D008989 7.5e-32 141.4 102 67.6
Hma1.2p1_0322F.1_g124790 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 9.7e-32 141.0 153 51.6
SEGI_38813 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 1.1e-30 137.5 107 63.6
Sc10g0002800 Simmondsia chinensis HOM05D002744 ORTHO05D008989 6.5e-28 128.3 131 55.0
Mapoly0001s0439 Marchantia polymorpha HOM05D002744 ORTHO05D008989 7.2e-27 124.8 162 43.2
CDE01G0559 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 1.1e-22 110.9 143 45.5
Pp3c8_1670 Physcomitrium patens HOM05D002744 ORTHO05D008989 6.3e-15 85.1 99 42.4
SMO147G0318 Selaginella moellendorffii HOM05D002744 ORTHO05D008989 2.0e-13 80.1 138 34.8
Psat5g125520 Pisum sativum HOM05D002744 ORTHO05D008989 1.1e-11 74.3 61 55.7
C06p23580 Brassica napus HOM05D002744 ORTHO05D008989 2.1e-10 70.1 49 61.2
CAN.G118.19 Capsicum annuum HOM05D002744 ORTHO05D008989 6.8e-09 65.1 50 62.0


User provided reference genes

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