Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 0.0e+00 1793.9 877 100.0
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 0.0e+00 1410.2 887 79.6
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 0.0e+00 1340.1 883 75.9
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 0.0e+00 1293.5 869 73.8
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 0.0e+00 1278.1 870 73.2
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1276.9 842 74.0
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 0.0e+00 1276.5 864 73.5
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 0.0e+00 1275.0 874 73.0
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1259.6 875 72.6
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 0.0e+00 1258.8 818 73.7
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1258.4 844 72.4
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1251.9 845 71.8
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 0.0e+00 1251.5 864 72.2
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 0.0e+00 1250.3 901 71.3
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 0.0e+00 1243.8 872 72.1
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1243.4 848 71.5
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 0.0e+00 1236.1 872 71.0
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 0.0e+00 1227.6 851 71.6
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 0.0e+00 1226.5 885 70.4
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 0.0e+00 1223.0 884 70.7
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1218.0 873 70.0
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1211.4 874 68.3
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 0.0e+00 1211.1 819 70.9
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 0.0e+00 1210.7 941 66.0
Cfa001293 Carpinus fangiana HOM05D005937 ORTHO05D008151 0.0e+00 1209.5 695 84.0
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 0.0e+00 1206.4 822 71.0
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 0.0e+00 1205.3 874 68.9
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 0.0e+00 1204.9 832 70.6
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 0.0e+00 1204.9 878 67.8
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1201.8 873 67.6
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 0.0e+00 1199.1 886 68.2
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 0.0e+00 1198.7 814 71.9
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 0.0e+00 1197.2 875 68.5
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 0.0e+00 1192.6 871 68.2
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 0.0e+00 1190.6 843 70.9
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 0.0e+00 1189.5 874 67.7
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1187.6 874 66.6
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 0.0e+00 1185.2 914 65.5
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 0.0e+00 1184.9 821 70.2
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 0.0e+00 1179.5 896 65.1
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 0.0e+00 1179.1 879 66.3
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 0.0e+00 1177.9 869 67.3
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 0.0e+00 1177.5 852 69.7
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 0.0e+00 1175.2 866 66.6
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 0.0e+00 1175.2 818 69.4
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 0.0e+00 1170.6 841 70.3
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 0.0e+00 1170.2 877 66.7
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 0.0e+00 1170.2 865 67.2
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 0.0e+00 1168.7 877 66.5
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 0.0e+00 1167.1 819 69.5
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 0.0e+00 1166.8 883 65.7
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 0.0e+00 1166.4 857 67.0
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1164.8 872 68.5
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 0.0e+00 1157.5 762 73.9
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 0.0e+00 1155.6 820 67.8
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 0.0e+00 1154.0 820 67.8
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1153.7 909 63.0
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 0.0e+00 1147.5 885 64.2
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 0.0e+00 1147.5 911 65.8
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 0.0e+00 1142.9 845 66.9
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 0.0e+00 1133.6 878 64.2
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 0.0e+00 1133.2 880 64.2
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 0.0e+00 1132.1 879 63.8
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 0.0e+00 1130.5 882 64.2
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 0.0e+00 1128.2 970 60.2
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 0.0e+00 1124.8 851 65.3
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 0.0e+00 1124.4 888 66.3
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 0.0e+00 1124.0 883 63.6
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 0.0e+00 1124.0 883 63.6
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 0.0e+00 1124.0 885 63.3
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 0.0e+00 1119.8 877 63.2
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 0.0e+00 1119.0 834 65.5
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1105.9 830 65.8
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 0.0e+00 1104.7 885 63.5
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 0.0e+00 1100.1 805 67.1
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 0.0e+00 1099.0 818 65.2
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 0.0e+00 1095.9 819 65.9
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 0.0e+00 1092.8 824 65.0
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 0.0e+00 1092.4 845 65.3
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 0.0e+00 1083.2 823 65.0
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 0.0e+00 1082.8 863 63.8
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 0.0e+00 1079.3 866 64.1
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 2.3e-301 1038.9 885 59.0
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 1.9e-300 1035.8 868 62.1
Cc02_g06180 Coffea canephora HOM05D005937 ORTHO05D008151 1.4e-298 1029.6 641 75.8
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 8.9e-298 1026.9 740 67.0
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 1.2e-297 1026.5 861 59.3
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 1.6e-294 1016.1 714 70.3
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 5.0e-293 1011.1 754 68.7
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 4.0e-290 1001.5 914 58.3
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 8.3e-288 993.8 809 59.3
MD01G1156200 Malus domestica HOM05D005937 ORTHO05D008151 1.9e-287 992.6 701 69.8
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 5.2e-282 974.5 790 64.3
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 2.9e-280 968.8 853 57.2
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 4.2e-263 911.8 691 67.9
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 1.1e-250 870.5 853 51.0
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 1.9e-247 859.8 726 62.4
Mapoly0007s0127 Marchantia polymorpha HOM05D005937 ORTHO05D008151 1.6e-243 846.7 865 48.7
Pp3c22_15610 Physcomitrium patens HOM05D005937 ORTHO05D008151 2.8e-235 819.3 841 49.5
SMO141G0067 Selaginella moellendorffii HOM05D005937 ORTHO05D008151 5.1e-229 798.5 751 52.3
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 7.0e-210 734.9 786 51.1
CBR_g61489 Chara braunii HOM05D005937 ORTHO05D008151 1.6e-193 680.6 568 54.8
Hma1.2p1_0523F.1_g172070 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 2.7e-193 679.9 511 67.9
Actinidia00964 Actinidia chinensis HOM05D005937 ORTHO05D008151 1.5e-191 674.1 481 69.2
PRCOL_00004696 Prasinoderma coloniale HOM05D005937 ORTHO05D008151 9.2e-162 575.1 816 40.0
Cre12.g554250 Chlamydomonas reinhardtii HOM05D005937 ORTHO05D008151 5.2e-157 559.3 796 40.2
CDE04G2743 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 8.1e-150 535.4 543 53.2
HPP92_007578 Vanilla planifolia HOM05D005937 ORTHO05D008151 5.0e-123 446.4 404 55.4
RhsimUnG0153700 Rhododendron simsii HOM05D005937 ORTHO05D008151 6.7e-120 436.0 298 71.8
Rhsim12G0073000 Rhododendron simsii HOM05D005937 ORTHO05D008151 7.9e-113 412.5 297 69.4
BcaB01g00040 Brassica carinata HOM05D005937 ORTHO05D008151 5.3e-109 399.8 372 58.3
CDE04G2646 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 1.4e-93 348.6 246 63.8
Aqoxy1G01260 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 7.7e-92 342.8 197 79.2
Aqoxy2G01148 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 7.7e-92 342.8 188 83.0
Aqoxy4G01451 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 3.8e-91 340.5 186 83.3
SEGI_34891 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 5.0e-91 340.1 244 66.0
MCO05G015 Micromonas commoda HOM05D005937 ORTHO05D008151 3.2e-82 310.8 416 38.7
BolC8t50756H Brassica oleracea HOM05D005937 ORTHO05D008151 1.3e-78 298.9 203 65.5
HPP92_007579 Vanilla planifolia HOM05D005937 ORTHO05D008151 2.2e-78 298.1 217 62.2
Ah.00g001390 Amaranthus hybridus HOM05D005937 ORTHO05D008151 4.4e-55 220.7 147 66.0
SEGI_09306 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 2.9e-46 191.4 131 61.8
Aqoxy4G01461 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 3.5e-28 131.3 176 47.2
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 1.9e-26 125.6 167 41.9
Rhsim12G0072900 Rhododendron simsii HOM05D005937 ORTHO05D008151 1.1e-10 73.2 52 71.2
Hund15853 Selenicereus undatus HOM05D005937 ORTHO05D026713 1.1e-10 73.2 109 40.4
Aqoxy4G00767 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 1.1e-08 66.6 97 45.4
SEGI_37602 Sequoiadendron giganteum HOM05D005937 ORTHO05D026713 1.3e-06 59.7 192 28.1


User provided reference genes

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