Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G193000 Carya illinoinensis HOM05D005616 ORTHO05D006975 1.8e-145 519.2 257 100.0
Haze_17234 Corylus avellana HOM05D005616 ORTHO05D006975 1.3e-116 423.3 245 83.3
COL.COLO4_25743 Corchorus olitorius HOM05D005616 ORTHO05D006975 1.2e-101 373.6 246 72.8
Lj8A66T51 Lonicera japonica HOM05D005616 ORTHO05D006975 1.9e-99 366.3 245 71.0
Prupe.2G251100 Prunus persica HOM05D005616 ORTHO05D006975 4.3e-99 365.2 255 70.6
CSS0029859 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 2.8e-98 362.5 245 69.4
Gohir.A04G093400 Gossypium hirsutum HOM05D005616 ORTHO05D006975 4.7e-98 361.7 246 70.3
Thecc.10G015200 Theobroma cacao HOM05D005616 ORTHO05D006975 1.0e-97 360.5 246 70.3
Manes.10G011400 Manihot esculenta HOM05D005616 ORTHO05D006975 1.8e-97 359.8 254 68.9
Gorai.012G116600 Gossypium raimondii HOM05D005616 ORTHO05D006975 2.3e-97 359.4 247 69.6
Dinv10614 Davidia involucrata HOM05D005616 ORTHO05D006975 4.0e-97 358.6 245 70.2
Gohir.D04G132700 Gossypium hirsutum HOM05D005616 ORTHO05D006975 4.0e-97 358.6 247 69.2
FAN07G0068 Fragaria x ananassa HOM05D005616 ORTHO05D006975 1.3e-95 353.6 256 69.9
Medtr3g070890 Medicago truncatula HOM05D005616 ORTHO05D006975 1.3e-95 353.6 245 69.0
FvH4_4g21980 Fragaria vesca HOM05D005616 ORTHO05D006975 4.1e-94 348.6 256 69.1
FvH4_7g24571 Fragaria vesca HOM05D005616 ORTHO05D006975 1.2e-93 347.1 256 69.9
Medtr3g449480 Medicago truncatula HOM05D005616 ORTHO05D006975 1.2e-93 347.1 244 68.4
RcHm_v2.0_Chr1g0370411 Rosa chinensis HOM05D005616 ORTHO05D006975 1.2e-93 347.1 255 68.2
FAN03G0254 Fragaria x ananassa HOM05D005616 ORTHO05D006975 4.6e-93 345.1 256 68.0
FAN06G2993 Fragaria x ananassa HOM05D001932 ORTHO05D006975 5.9e-93 344.7 255 69.4
FAN01G0309 Fragaria x ananassa HOM05D001932 ORTHO05D006975 7.8e-93 344.4 253 68.4
Duzib128G0549 Durio zibethinus HOM05D005616 ORTHO05D006975 1.3e-92 343.6 242 67.8
Lj1g0010131 Lotus japonicus HOM05D005616 ORTHO05D006975 1.3e-92 343.6 245 68.2
GSVIVG01032805001 Vitis vinifera HOM05D005616 ORTHO05D006975 1.7e-92 343.2 247 70.4
MD07G1223000 Malus domestica HOM05D005616 ORTHO05D006975 2.3e-92 342.8 246 68.3
Lj6g0010776 Lotus japonicus HOM05D005616 ORTHO05D006975 5.0e-92 341.7 245 67.8
Lalb_Chr08g0231681 Lupinus albus HOM05D005616 ORTHO05D006975 5.0e-92 341.7 245 66.9
Ciclev10032361m.g Citrus clementina HOM05D005616 ORTHO05D006975 2.5e-91 339.3 239 69.5
Glyma.11G230900 Glycine max HOM05D005616 ORTHO05D006975 4.3e-91 338.6 245 66.9
Solyc02g076760.3 Solanum lycopersicum HOM05D005616 ORTHO05D006975 7.3e-91 337.8 249 66.3
TPR.G11210 Trifolium pratense HOM05D005616 ORTHO05D006975 7.3e-91 337.8 245 66.9
Glyma.18G026400 Glycine max HOM05D005616 ORTHO05D006975 9.5e-91 337.4 242 67.8
PGSC0003DMG400010237 Solanum tuberosum HOM05D005616 ORTHO05D006975 9.5e-91 337.4 255 65.5
TWI09G1208 Tripterygium wilfordii HOM05D005616 ORTHO05D006975 1.6e-90 336.7 254 66.1
vmacro06962 Vaccinium macrocarpon HOM05D005616 ORTHO05D006975 1.6e-90 336.7 246 65.9
Eucgr.J00201 Eucalyptus grandis HOM05D005616 ORTHO05D006975 2.1e-90 336.3 248 70.2
Sopen02g021670 Solanum pennellii HOM05D005616 ORTHO05D006975 4.7e-90 335.1 249 65.9
Gohir.A10G237500 Gossypium hirsutum HOM05D005616 ORTHO05D006975 8.0e-90 334.3 238 68.9
Psat5g129880 Pisum sativum HOM05D005616 ORTHO05D006975 1.0e-89 334.0 245 66.5
FAN12G0831 Fragaria x ananassa HOM05D005616 ORTHO05D006975 5.2e-89 331.6 283 62.5
CsaV3_5G010220 Cucumis sativus L. HOM05D005616 ORTHO05D006975 2.0e-88 329.7 255 62.4
Nitab4.5_0003454g0010 Nicotiana tabacum HOM05D005616 ORTHO05D006975 2.0e-88 329.7 221 71.9
Nitab4.5_0005018g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 3.4e-88 328.9 221 72.4
Sopen06g017380 Solanum pennellii HOM05D005616 ORTHO05D006975 7.5e-88 327.8 249 65.5
Phvul.001G244100 Phaseolus vulgaris HOM05D005616 ORTHO05D006975 1.3e-87 327.0 246 65.0
Potri.008G069500 Populus trichocarpa HOM05D005616 ORTHO05D006975 1.3e-87 327.0 254 64.6
Cfa001309 Carpinus fangiana HOM05D005616 ORTHO05D006975 1.7e-87 326.6 176 88.1
PGSC0003DMG401008474 Solanum tuberosum HOM05D005616 ORTHO05D006975 2.9e-87 325.9 249 65.1
ClCG07G004280 Citrullus lanatus HOM05D005616 ORTHO05D006975 4.9e-87 325.1 252 63.5
TAR623G1070 Trochodendron aralioides HOM05D005616 ORTHO05D006975 4.9e-87 325.1 223 71.7
Solyc06g051410.4 Solanum lycopersicum HOM05D005616 ORTHO05D006975 6.4e-87 324.7 255 63.5
Sabra08G0051100 Salix brachista HOM05D005616 ORTHO05D006975 8.3e-87 324.3 254 63.4
PSO339G0515 Papaver somniferum HOM05D005616 ORTHO05D006975 1.1e-86 323.9 261 62.8
Sed0025730 Sechium edule HOM05D005616 ORTHO05D006975 1.9e-86 323.2 255 61.2
Ca_15132_v3 Cicer arietinum L. HOM05D005616 ORTHO05D006975 2.4e-86 322.8 244 65.6
FAN10G3671 Fragaria x ananassa HOM05D005616 ORTHO05D006975 2.4e-86 322.8 243 66.7
PSO384G3782 Papaver somniferum HOM05D005616 ORTHO05D006975 2.4e-86 322.8 261 62.1
Peaxi162Scf00284g01041 Petunia axillaris HOM05D005616 ORTHO05D006975 5.4e-86 321.6 249 64.7
MSTRG.8961 Avicennia marina HOM05D005616 ORTHO05D006975 2.0e-85 319.7 239 66.5
MELO3C026789.2 Cucumis melo HOM05D005616 ORTHO05D006975 2.7e-85 319.3 232 65.1
PSO675G8834 Papaver somniferum HOM05D005616 ORTHO05D006975 4.6e-85 318.5 259 64.9
THA.LOC104816542 Tarenaya hassleriana HOM05D005616 ORTHO05D006975 4.6e-85 318.5 254 62.2
Cc02_g06410 Coffea canephora HOM05D005616 ORTHO05D006975 6.0e-85 318.2 254 63.0
Migut.F00691 Erythranthe guttata HOM05D005616 ORTHO05D006975 6.0e-85 318.2 245 63.7
Peaxi162Scf00801g00729 Petunia axillaris HOM05D005616 ORTHO05D006975 7.8e-85 317.8 249 63.5
Aa31LG11G6640 Aethionema arabicum HOM05D005616 ORTHO05D006975 5.0e-84 315.1 243 65.0
Thhalv10014368m.g Eutrema salsugineum HOM05D005616 ORTHO05D006975 6.6e-84 314.7 254 61.4
AT1G07780 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 1.5e-83 313.5 254 59.8
Aqoxy4G02536 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 1.9e-83 313.2 246 63.4
AT5G05590 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 1.9e-83 313.2 254 59.8
HanXRQChr08g0222401 Helianthus annuus HOM05D005616 ORTHO05D006975 2.5e-83 312.8 245 62.0
PSO017G0320 Papaver somniferum HOM05D005616 ORTHO05D006975 5.6e-83 311.6 197 76.1
DCAR_023439 Daucus carota HOM05D005616 ORTHO05D006975 9.5e-83 310.8 202 72.3
Gorai.011G289500 Gossypium raimondii HOM05D005616 ORTHO05D006975 1.6e-82 310.1 245 63.7
AL6G15480 Arabidopsis lyrata HOM05D005616 ORTHO05D006975 2.1e-82 309.7 241 63.5
CANSAT78G1638 Cannabis sativa HOM05D005616 ORTHO05D006975 2.1e-82 309.7 225 66.7
Sp6g37270 Schrenkiella parvula HOM05D005616 ORTHO05D006975 2.8e-82 309.3 251 60.6
Gohir.D10G249200 Gossypium hirsutum HOM05D005616 ORTHO05D006975 3.6e-82 308.9 245 63.7
Sc10g0002410 Simmondsia chinensis HOM05D005616 ORTHO05D006975 8.1e-82 307.8 245 62.0
VMungo1383G1171 Vigna mungo HOM05D005616 ORTHO05D006975 8.1e-82 307.8 255 61.6
Potri.012G145600 Populus trichocarpa HOM05D005616 ORTHO05D006975 1.4e-81 307.0 224 67.4
ECA233G4091 Erigeron canadensis HOM05D005616 ORTHO05D006975 3.1e-81 305.8 245 59.2
Carub.0006s0449 Capsella rubella HOM05D005616 ORTHO05D006975 8.9e-81 304.3 230 65.2
arahy.Tifrunner.gnm1.ann1.061K9L Arachis hypogaea HOM05D005616 ORTHO05D006975 2.6e-80 302.8 176 81.2
arahy.Tifrunner.gnm1.ann1.R92L2M Arachis hypogaea HOM05D005616 ORTHO05D006975 2.6e-80 302.8 185 78.4
SalBow6G5046 Salvia bowleyana HOM05D005616 ORTHO05D006975 4.4e-80 302.0 203 70.0
MBI19_g36756_MAGBIO Magnolia biondii HOM05D005616 ORTHO05D006975 5.8e-80 301.6 197 73.1
EL10Ac1g02124 Beta vulgaris HOM05D005616 ORTHO05D006975 3.7e-79 298.9 199 71.4
SGA_v2.0_scaffold105G30487 Striga asiatica HOM05D005616 ORTHO05D006975 6.4e-79 298.1 204 69.6
AUR62012260 Chenopodium quinoa HOM05D005616 ORTHO05D006975 1.1e-78 297.4 236 62.7
BcaB05g21694 Brassica carinata HOM05D005616 ORTHO05D006975 1.9e-78 296.6 252 59.9
CSS0002000 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 7.1e-78 294.7 176 76.7
CARHR034480 Cardamine hirsuta HOM05D005616 ORTHO05D006975 7.1e-78 294.7 221 65.6
TAR369G1110 Trochodendron aralioides HOM05D005616 ORTHO05D006975 7.1e-78 294.7 213 68.1
Lsat_1_v5_gn_8_11701 Lactuca sativa HOM05D005616 ORTHO05D006975 9.2e-78 294.3 231 61.9
Hund13869 Selenicereus undatus HOM05D005616 ORTHO05D006975 1.2e-77 293.9 212 68.4
BolC2t06207H Brassica oleracea HOM05D005616 ORTHO05D006975 2.1e-77 293.1 232 63.8
SGA_v2.0_scaffold60G21012 Striga asiatica HOM05D005616 ORTHO05D006975 2.7e-77 292.7 204 68.1
unitig_0.g2023 Utricularia gibba HOM05D005616 ORTHO05D006975 3.5e-77 292.4 197 70.6
Oeu004695.1 Olea europaea HOM05D005616 ORTHO05D006975 4.6e-77 292.0 203 68.5
BcaB05g21698 Brassica carinata HOM05D005616 ORTHO05D006975 3.9e-76 288.9 249 59.8
PGR044G0338 Punica granatum HOM05D005616 ORTHO05D006975 6.6e-76 288.1 185 75.1
CSS0019139 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 8.6e-76 287.7 176 75.0
BraA02t04856Z Brassica rapa HOM05D005616 ORTHO05D006975 1.1e-75 287.3 232 62.1
AUR62022893 Chenopodium quinoa HOM05D005616 ORTHO05D006975 4.3e-75 285.4 210 66.7
Nitab4.5_0010803g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 2.1e-74 283.1 185 74.1
Aqoxy5G03614 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 2.2e-71 273.1 165 78.2
SHI03421 Sapria himalayana HOM05D005616 ORTHO05D006975 9.2e-70 267.7 206 63.6
ATR0730G169 Amborella trichopoda HOM05D005616 ORTHO05D006975 5.1e-68 261.9 236 56.8
Os02g0266000 Oryza sativa ssp. japonica HOM05D005616 ORTHO05D006975 1.3e-63 247.3 181 61.9
HPP92_011508 Vanilla planifolia HOM05D005616 ORTHO05D006975 2.2e-63 246.5 207 58.0
CAN.G370.83 Capsicum annuum HOM05D002257 ORTHO05D006975 2.4e-62 243.0 197 63.5
AUR62028615 Chenopodium quinoa HOM05D005616 ORTHO05D006975 2.4e-62 243.0 219 58.4
Zm00001eb281510 Zea mays HOM05D005616 ORTHO05D006975 9.3e-62 241.1 210 55.2
SEGI_33372 Sequoiadendron giganteum HOM05D005616 ORTHO05D006975 1.1e-59 234.2 190 59.5
AT1G29410 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 3.3e-59 232.6 212 54.7
Zm00001eb203980 Zea mays HOM05D005616 ORTHO05D006975 2.1e-58 229.9 224 52.7
CDE02G4500 Ceratophyllum demersum HOM05D005293 ORTHO05D006764 6.9e-57 224.9 184 58.7
Aqoxy332s005 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 8.4e-55 218.0 151 73.5
C02p02440 Brassica napus HOM05D005616 ORTHO05D006975 4.6e-53 212.2 199 54.3
Pp3c17_23550 Physcomitrium patens HOM05D005616 ORTHO05D006975 4.8e-50 202.2 184 52.7
CiPaw.01G059100 Carya illinoinensis HOM05D005616 ORTHO05D006975 4.0e-49 199.1 109 90.8
Mapoly0041s0067 Marchantia polymorpha HOM05D005616 ORTHO05D006975 6.9e-49 198.4 180 52.2
AagrBONN_evm.TU.Sc2ySwM_228.1039 Anthoceros agrestis HOM05D005616 ORTHO05D006975 3.2e-46 189.5 179 50.3
Dinv21739 Davidia involucrata HOM05D005616 ORTHO05D006975 8.7e-44 181.4 99 80.8
SMO364G0619 Selaginella moellendorffii HOM05D005616 ORTHO05D006975 1.4e-41 174.1 185 47.0
FAN17G0984 Fragaria x ananassa HOM05D002859 ORTHO05D003120 1.5e-40 170.6 139 66.9
Cre12.g519000 Chlamydomonas reinhardtii HOM05D005616 ORTHO05D006975 2.6e-40 169.9 207 41.5
MCO02G328 Micromonas commoda HOM05D005616 ORTHO05D006975 2.5e-38 163.3 211 37.0
Potri.014G188400 Populus trichocarpa HOM05D005616 ORTHO05D006975 6.3e-34 148.7 130 60.8
PRCOL_00006470 Prasinoderma coloniale HOM05D005616 ORTHO05D006975 1.4e-33 147.5 190 41.6
Nn2g13147 Nelumbo nucifera HOM05D005616 ORTHO05D006975 3.1e-33 146.4 102 72.5
DCAR_029632 Daucus carota HOM05D000090 ORTHO05D001584 1.9e-27 127.1 91 65.9
MSTRG.13829 Avicennia marina HOM05D005616 ORTHO05D006975 1.7e-23 114.0 88 65.9
Atru.chr12.48 Acer truncatum HOM05D005616 ORTHO05D006975 2.7e-21 106.7 110 50.0
Dinv21738 Davidia involucrata HOM05D005616 ORTHO05D006975 1.4e-20 104.4 135 45.2
CBR_g37169 Chara braunii HOM05D005616 ORTHO05D006975 3.0e-20 103.2 160 35.6
Atru.chr7.2145 Acer truncatum HOM05D005616 ORTHO05D006975 2.0e-11 73.9 44 79.5
Cfa025268 Carpinus fangiana HOM05D003366 ORTHO05D004562 1.6e-08 64.3 207 28.5


User provided reference genes

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