Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G191600 Carya illinoinensis HOM05D004604 ORTHO05D005744 0.0e+00 1268.1 636 100.0
Cfa001330 Carpinus fangiana HOM05D004604 ORTHO05D005744 1.2e-251 873.2 639 73.1
Manes.10G013900 Manihot esculenta HOM05D004604 ORTHO05D005744 2.0e-227 792.7 641 65.1
CSS0014761 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 1.2e-224 783.5 643 64.7
TWI09G1217 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 6.4e-221 771.2 641 63.5
Sabra10G0146600 Salix brachista HOM05D004604 ORTHO05D005744 6.0e-219 764.6 633 62.6
Thecc.10G020600 Theobroma cacao HOM05D004604 ORTHO05D005744 2.3e-218 762.7 627 63.6
Potri.010G190100 Populus trichocarpa HOM05D004604 ORTHO05D005744 1.1e-217 760.4 628 63.2
MD01G1132500 Malus domestica HOM05D004604 ORTHO05D005744 1.9e-217 759.6 641 63.5
Atru.chr12.19 Acer truncatum HOM05D004604 ORTHO05D005744 1.6e-216 756.5 643 63.3
Dinv34395 Davidia involucrata HOM05D004604 ORTHO05D005744 4.7e-216 755.0 577 69.3
Haze_17214 Corylus avellana HOM05D004604 ORTHO05D005744 2.3e-215 752.7 657 64.4
TAR623G0226 Trochodendron aralioides HOM05D004604 ORTHO05D005744 6.8e-215 751.1 640 62.8
Ciclev10030943m.g Citrus clementina HOM05D004604 ORTHO05D005744 3.4e-214 748.8 646 62.7
Lj1C953T18 Lonicera japonica HOM05D004604 ORTHO05D005744 2.2e-213 746.1 643 63.3
TWI73G0703 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 3.7e-213 745.3 679 59.1
MD07G1220300 Malus domestica HOM05D004604 ORTHO05D005744 1.1e-212 743.8 642 62.8
Gohir.A10G235000 Gossypium hirsutum HOM05D004604 ORTHO05D005744 6.0e-211 738.0 627 61.4
Gorai.011G285800 Gossypium raimondii HOM05D004604 ORTHO05D005744 6.6e-210 734.6 627 61.1
Glyma.18G028600 Glycine max HOM05D004604 ORTHO05D005744 8.6e-210 734.2 628 61.6
CSS0028164 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 3.3e-209 732.3 643 61.6
Haze_17213 Corylus avellana HOM05D004604 ORTHO05D005744 4.3e-209 731.9 635 64.9
Prupe.2G248700 Prunus persica HOM05D004604 ORTHO05D005744 9.5e-209 730.7 641 61.3
Rhsim03G0142100 Rhododendron simsii HOM05D004604 ORTHO05D005744 9.5e-209 730.7 627 61.6
FAN10G0865 Fragaria x ananassa HOM05D004604 ORTHO05D005744 6.8e-207 724.5 638 61.9
RcHm_v2.0_Chr1g0369991 Rosa chinensis HOM05D004604 ORTHO05D005744 2.0e-206 723.0 622 61.9
Nn2g11459 Nelumbo nucifera HOM05D004604 ORTHO05D005744 3.4e-206 722.2 629 59.9
arahy.Tifrunner.gnm1.ann1.E2DHW8 Arachis hypogaea HOM05D004604 ORTHO05D005744 2.9e-205 719.2 626 59.6
Cpa.g.sc19.189 Carica papaya HOM05D004604 ORTHO05D005744 1.1e-204 717.2 647 61.1
Glyma.11G228500 Glycine max HOM05D004604 ORTHO05D005744 1.4e-204 716.8 628 61.6
Medtr3g070310 Medicago truncatula HOM05D004604 ORTHO05D005744 7.1e-204 714.5 647 59.4
Phvul.001G241900 Phaseolus vulgaris HOM05D004604 ORTHO05D005744 9.2e-204 714.1 629 59.9
Psat5g126400 Pisum sativum HOM05D004604 ORTHO05D005744 1.7e-202 709.9 644 59.3
CANSAT35G0855 Cannabis sativa HOM05D004604 ORTHO05D005744 5.1e-202 708.4 628 59.7
FvH4_7g24330 Fragaria vesca HOM05D004604 ORTHO05D005744 6.6e-202 708.0 637 61.1
Lj6g0016498 Lotus japonicus HOM05D004604 ORTHO05D005744 1.1e-201 707.2 628 60.0
FAN01G3126 Fragaria x ananassa HOM05D004604 ORTHO05D005744 1.2e-200 703.7 689 57.3
VMungo1383G0266 Vigna mungo HOM05D004604 ORTHO05D005744 2.1e-200 703.0 628 59.9
Hma1.2p1_0446F.1_g154570 Hydrangea macrophylla HOM05D004604 ORTHO05D005744 2.6e-198 696.0 638 59.2
Lalb_Chr18g0052631 Lupinus albus HOM05D004604 ORTHO05D005744 2.2e-197 693.0 641 58.2
Duzib114G0112 Durio zibethinus HOM05D004604 ORTHO05D005744 1.4e-196 690.3 626 58.6
Ca_15268_v3 Cicer arietinum L. HOM05D004604 ORTHO05D005744 1.6e-195 686.8 644 57.8
Cc02_g06650 Coffea canephora HOM05D004604 ORTHO05D005744 2.7e-195 686.0 626 58.3
ClCG11G006230 Citrullus lanatus HOM05D004604 ORTHO05D005744 1.7e-194 683.3 637 57.1
FAN06G3796 Fragaria x ananassa HOM05D004604 ORTHO05D005744 2.3e-194 682.9 597 62.0
Lalb_Chr15g0084181 Lupinus albus HOM05D004604 ORTHO05D005744 3.9e-194 682.2 641 58.7
PGR044G2346 Punica granatum HOM05D004604 ORTHO05D005744 4.8e-192 675.2 631 58.0
TPR.G2507 Trifolium pratense HOM05D004604 ORTHO05D005744 1.1e-191 674.1 645 57.7
Aqoxy4G02603 Aquilegia oxysepala HOM05D004604 ORTHO05D005744 4.4e-190 668.7 638 55.5
Dinv17981 Davidia involucrata HOM05D004604 ORTHO05D005744 2.2e-189 666.4 497 70.8
Sabra08G0049200 Salix brachista HOM05D004604 ORTHO05D005744 4.2e-188 662.1 584 61.0
Hund13846 Selenicereus undatus HOM05D004604 ORTHO05D005744 4.2e-188 662.1 649 55.8
CsaV3_6G001760 Cucumis sativus L. HOM05D004604 ORTHO05D005744 3.5e-187 659.1 621 55.7
Eucgr.J00226 Eucalyptus grandis HOM05D004604 ORTHO05D005744 1.0e-186 657.5 645 56.9
Peaxi162Scf00825g00019 Petunia axillaris HOM05D004604 ORTHO05D005744 3.9e-186 655.6 624 56.9
TAR369G0014 Trochodendron aralioides HOM05D004604 ORTHO05D005744 1.5e-185 653.7 593 60.9
MELO3C008290.2 Cucumis melo HOM05D004604 ORTHO05D005744 1.8e-183 646.7 611 56.3
Nitab4.5_0000802g0040 Nicotiana tabacum HOM05D004604 ORTHO05D005744 1.8e-183 646.7 621 55.4
PSO384G4393 Papaver somniferum HOM05D004604 ORTHO05D005744 2.4e-183 646.4 636 55.0
THA.LOC104816553 Tarenaya hassleriana HOM05D004604 ORTHO05D005744 4.0e-183 645.6 625 54.6
ECA238G1235 Erigeron canadensis HOM05D004604 ORTHO05D005744 9.0e-183 644.4 618 55.5
PSO339G2357 Papaver somniferum HOM05D004604 ORTHO05D005744 1.7e-181 640.2 648 54.0
HanXRQChr14g0459851 Helianthus annuus HOM05D004604 ORTHO05D005744 4.9e-181 638.6 637 54.3
Eucgr.J00228 Eucalyptus grandis HOM05D004604 ORTHO05D005744 1.1e-180 637.5 624 56.2
Nitab4.5_0005174g0010 Nicotiana tabacum HOM05D004604 ORTHO05D005744 3.2e-180 636.0 621 55.2
SGA_v2.0_scaffold76G25082 Striga asiatica HOM05D004604 ORTHO05D005744 7.1e-180 634.8 640 52.0
Potri.008G067000 Populus trichocarpa HOM05D004604 ORTHO05D005744 6.0e-179 631.7 536 62.7
PGSC0003DMG400023817 Solanum tuberosum HOM05D004604 ORTHO05D005744 2.5e-177 626.3 621 54.6
Aa31LG11G6730 Aethionema arabicum HOM05D004604 ORTHO05D005744 5.6e-177 625.2 626 52.7
GSVIVG01032843001 Vitis vinifera HOM05D004604 ORTHO05D005744 7.4e-177 624.8 634 54.4
FAN03G0827 Fragaria x ananassa HOM05D004604 ORTHO05D005744 6.2e-176 621.7 709 51.9
EL10Ac2g04814 Beta vulgaris HOM05D004604 ORTHO05D005744 1.1e-175 620.9 645 54.1
Sopen06g017720 Solanum pennellii HOM05D004604 ORTHO05D005744 1.8e-175 620.2 645 53.3
Lsat_1_v5_gn_2_122780 Lactuca sativa HOM05D004604 ORTHO05D005744 2.4e-175 619.8 657 52.4
Eucgr.J00230 Eucalyptus grandis HOM05D004604 ORTHO05D005744 4.0e-175 619.0 627 54.7
Ah.16g103410 Amaranthus hybridus HOM05D004604 ORTHO05D005744 3.4e-174 615.9 632 52.2
MBI05_g34496_MAGBIO Magnolia biondii HOM05D004604 ORTHO05D005744 3.4e-174 615.9 546 59.5
vmacro06977 Vaccinium macrocarpon HOM05D004604 ORTHO05D005744 7.6e-174 614.8 641 55.2
arahy.Tifrunner.gnm1.ann1.C37ZT5 Arachis hypogaea HOM05D004604 ORTHO05D005744 4.9e-173 612.1 565 57.0
Sp3g09520 Schrenkiella parvula HOM05D004604 ORTHO05D005744 4.9e-173 612.1 619 53.3
Sp6g37190 Schrenkiella parvula HOM05D004604 ORTHO05D005744 4.9e-173 612.1 629 52.3
Oeu048694.1 Olea europaea HOM05D004604 ORTHO05D005744 1.1e-172 610.9 490 64.5
Carub.0003s1055 Capsella rubella HOM05D004604 ORTHO05D005744 3.2e-172 609.4 615 53.0
CAN.G17.11 Capsicum annuum HOM05D004604 ORTHO05D005744 3.2e-172 609.4 620 54.7
Solyc06g051760.3 Solanum lycopersicum HOM05D004604 ORTHO05D005744 7.1e-172 608.2 652 52.1
MSTRG.213 Avicennia marina HOM05D004604 ORTHO05D005744 9.3e-172 607.8 588 56.5
Cpa.g.sc19.187 Carica papaya HOM05D004604 ORTHO05D005744 3.5e-171 605.9 523 61.2
BcaC05g29392 Brassica carinata HOM05D004604 ORTHO05D005744 7.9e-171 604.7 622 52.6
C05p56850 Brassica napus HOM05D004604 ORTHO05D005744 7.9e-171 604.7 622 52.6
AL6G15600 Arabidopsis lyrata HOM05D004604 ORTHO05D005744 1.3e-170 604.0 646 51.9
BolC5t34349H Brassica oleracea HOM05D004604 ORTHO05D005744 2.3e-170 603.2 622 52.4
AT5G05700 Arabidopsis thaliana HOM05D004604 ORTHO05D005744 3.0e-170 602.8 656 51.5
BcaB06g25636 Brassica carinata HOM05D004604 ORTHO05D005744 3.9e-170 602.4 625 53.3
Migut.F01373 Erythranthe guttata HOM05D004604 ORTHO05D005744 8.7e-170 601.3 617 51.7
ATR0618G256 Amborella trichopoda HOM05D004604 ORTHO05D005744 1.5e-169 600.5 643 51.8
AL3G22760 Arabidopsis lyrata HOM05D004604 ORTHO05D005744 1.5e-169 600.5 620 52.1
Hund15948 Selenicereus undatus HOM05D004604 ORTHO05D005744 1.1e-167 594.3 630 53.3
A05p38060 Brassica napus HOM05D004604 ORTHO05D005744 3.4e-166 589.3 623 52.3
BraA05t22598Z Brassica rapa HOM05D004604 ORTHO05D005744 3.4e-166 589.3 623 52.3
HanXRQChr14g0459841 Helianthus annuus HOM05D004604 ORTHO05D005744 2.2e-165 586.6 632 50.5
Migut.F01374 Erythranthe guttata HOM05D004604 ORTHO05D005744 3.8e-165 585.9 615 50.2
A10p30660 Brassica napus HOM05D004604 ORTHO05D005744 8.5e-165 584.7 619 52.0
CARHR085800 Cardamine hirsuta HOM05D004604 ORTHO05D005744 5.5e-164 582.0 623 51.7
DCAR_028567 Daucus carota HOM05D004604 ORTHO05D005744 7.2e-164 581.6 590 53.7
C09p71140 Brassica napus HOM05D004604 ORTHO05D005744 1.8e-162 577.0 621 51.5
BolC9t59876H Brassica oleracea HOM05D004604 ORTHO05D005744 5.7e-161 572.0 621 51.2
Cpa.g.sc19.188 Carica papaya HOM05D004604 ORTHO05D005744 7.4e-161 571.6 478 60.9
Eucgr.J00232 Eucalyptus grandis HOM05D004604 ORTHO05D005744 6.3e-160 568.5 569 56.4
Sed0013753 Sechium edule HOM05D004604 ORTHO05D005744 1.5e-158 563.9 474 60.8
BraA10t45107Z Brassica rapa HOM05D004604 ORTHO05D005744 2.0e-158 563.5 654 48.9
CARHR207580 Cardamine hirsuta HOM05D004604 ORTHO05D005744 7.7e-158 561.6 601 50.6
AUR62022867 Chenopodium quinoa HOM05D004604 ORTHO05D005744 5.5e-156 555.4 600 51.8
Os05g0446800 Oryza sativa ssp. japonica HOM05D004604 ORTHO05D005744 1.6e-155 553.9 634 49.1
unitig_62.g23928 Utricularia gibba HOM05D004604 ORTHO05D005744 2.7e-155 553.1 638 49.7
Gohir.D10G247400 Gossypium hirsutum HOM05D004604 ORTHO05D005744 5.1e-154 548.9 518 57.7
BcaC06g32278 Brassica carinata HOM05D004604 ORTHO05D005744 5.7e-153 545.4 620 50.2
Aa31LG3G4550 Aethionema arabicum HOM05D004604 ORTHO05D005744 1.5e-150 537.3 661 47.4
Carub.0006s0459 Capsella rubella HOM05D004604 ORTHO05D005744 4.5e-150 535.8 583 50.1
CDE03G0502 Ceratophyllum demersum HOM05D004604 ORTHO05D005744 5.0e-149 532.3 548 51.6
SEGI_40640 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 1.5e-145 520.8 623 49.0
Sc11g0007180 Simmondsia chinensis HOM05D004604 ORTHO05D005744 8.2e-144 515.0 529 53.5
Peaxi162Scf01208g00144 Petunia axillaris HOM05D004604 ORTHO05D005744 2.6e-142 510.0 530 55.1
Actinidia29693 Actinidia chinensis HOM05D004604 ORTHO05D005744 1.3e-141 507.7 637 46.3
Zm00001eb348230 Zea mays HOM05D004604 ORTHO05D005744 8.5e-141 505.0 533 52.0
Eucgr.J00227 Eucalyptus grandis HOM05D004604 ORTHO05D005744 2.5e-132 476.9 422 60.0
COL.COLO4_25696 Corchorus olitorius HOM05D004604 ORTHO05D005744 1.1e-124 451.4 629 45.6
HanXRQChr06g0172261 Helianthus annuus HOM05D004604 ORTHO05D005744 3.0e-122 443.4 486 50.8
SEGI_28443 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 1.4e-119 434.5 471 51.8
SEGI_33236 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 1.4e-119 434.5 471 51.8
AT3G11240 Arabidopsis thaliana HOM05D004604 ORTHO05D005744 7.0e-119 432.2 470 50.6
Mapoly0067s0057 Marchantia polymorpha HOM05D004604 ORTHO05D005744 1.6e-118 431.0 621 41.2
Pp3c3_24950 Physcomitrium patens HOM05D004604 ORTHO05D005744 5.6e-116 422.5 614 40.4
Actinidia33931 Actinidia chinensis HOM05D004604 ORTHO05D005744 9.8e-113 411.8 622 43.2
AUR62012235 Chenopodium quinoa HOM05D004604 ORTHO05D005744 3.7e-112 409.8 548 45.6
AagrBONN_evm.TU.Sc2ySwM_117.2751 Anthoceros agrestis HOM05D004604 ORTHO05D005744 1.8e-111 407.5 641 40.2
SMO118G0549 Selaginella moellendorffii HOM05D004604 ORTHO05D005744 6.4e-104 382.5 527 44.8
Thhalv10013820m.g Eutrema salsugineum HOM05D004604 ORTHO05D005744 1.7e-101 374.4 385 53.0
CBR_g49483 Chara braunii HOM05D004604 ORTHO05D005744 3.8e-72 276.9 503 36.4
PRCOL_00002395 Prasinoderma coloniale HOM05D004604 ORTHO05D005744 1.1e-71 275.4 555 34.8
arahy.Tifrunner.gnm1.ann1.3RRJ97 Arachis hypogaea HOM05D004604 ORTHO05D005744 6.2e-67 259.6 352 44.6
HPP92_018034 Vanilla planifolia HOM05D004604 ORTHO05D005744 5.1e-61 240.0 297 52.2
MCO15G553 Micromonas commoda HOM05D004604 ORTHO05D005744 3.1e-50 204.1 436 30.5
Cre13.g580600 Chlamydomonas reinhardtii HOM05D004604 ORTHO05D005744 2.2e-48 198.0 195 48.2
PSO339G5386 Papaver somniferum HOM05D004604 ORTHO05D005744 3.3e-44 184.1 119 70.6
Cfa022588 Carpinus fangiana HOM05D004604 ORTHO05D005744 7.0e-26 123.2 184 35.3
HPP92_018033 Vanilla planifolia HOM05D004604 ORTHO05D005744 9.1e-26 122.9 154 44.8
Peaxi162Scf01208g00156 Petunia axillaris HOM05D004604 ORTHO05D005744 8.8e-21 106.3 64 73.4
CDE04G1491 Ceratophyllum demersum HOM05D004604 ORTHO05D005744 1.3e-08 65.9 54 53.7
CBR_g49485 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-07 62.8 39 66.7
QL04p091051 Quercus lobata HOM05D004604 ORTHO05D013998 9.5e-07 59.7 68 54.4
QL01p024866 Quercus lobata HOM05D004604 ORTHO05D005744 2.8e-06 58.2 66 54.5
Oeu025172.2 Olea europaea HOM05D004604 ORTHO05D005744 3.6e-06 57.8 125 35.2


User provided reference genes

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