Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G189800 Carya illinoinensis HOM05D004806 ORTHO05D005397 0.0e+00 1354.7 700 100.0
CiPaw.01G295700 Carya illinoinensis HOM05D004806 ORTHO05D005397 4.1e-261 904.8 707 71.4
QL08p062653 Quercus lobata HOM05D004806 ORTHO05D005397 1.3e-235 820.1 748 63.6
Thecc.10G026200 Theobroma cacao HOM05D004806 ORTHO05D005397 1.0e-208 730.7 714 60.4
Prupe.2G246100 Prunus persica HOM05D004806 ORTHO05D005397 3.7e-206 722.2 708 61.3
Dinv34423 Davidia involucrata HOM05D004806 ORTHO05D005397 1.7e-203 713.4 718 58.5
RcHm_v2.0_Chr1g0369401 Rosa chinensis HOM05D004806 ORTHO05D005397 1.1e-202 710.7 717 59.0
Duzib106G0751 Durio zibethinus HOM05D004806 ORTHO05D005397 8.9e-200 701.0 642 61.1
Duzib114G0963 Durio zibethinus HOM05D004806 ORTHO05D005397 4.9e-198 695.3 706 58.6
FAN06G0754 Fragaria x ananassa HOM05D004806 ORTHO05D005397 5.4e-197 691.8 663 60.6
FvH4_7g24020 Fragaria vesca HOM05D004806 ORTHO05D005397 6.0e-196 688.3 663 60.5
MD01G1147200 Malus domestica HOM05D004806 ORTHO05D005397 7.8e-196 688.0 713 59.0
FAN03G1683 Fragaria x ananassa HOM05D004806 ORTHO05D005397 1.0e-195 687.6 665 59.8
Dinv20955 Davidia involucrata HOM05D004806 ORTHO05D005397 9.5e-194 681.0 707 58.1
Dinv20988 Davidia involucrata HOM05D004806 ORTHO05D005397 9.5e-194 681.0 707 58.1
FAN10G3438 Fragaria x ananassa HOM05D004806 ORTHO05D005397 3.6e-193 679.1 660 59.7
Ciclev10030877m.g Citrus clementina HOM05D004806 ORTHO05D005397 1.7e-190 670.2 668 59.0
Haze_17182 Corylus avellana HOM05D004806 ORTHO05D005397 2.9e-190 669.5 538 69.9
TWI53G0900 Tripterygium wilfordii HOM05D004806 ORTHO05D005397 1.4e-189 667.2 697 58.2
Gohir.A06G164600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 2.7e-188 662.9 671 57.5
CSS0019944 Camellia sinensis var. sinensis HOM05D004806 ORTHO05D005397 4.6e-188 662.1 719 57.0
Gorai.010G199100 Gossypium raimondii HOM05D004806 ORTHO05D005397 1.3e-187 660.6 671 57.7
FAN01G2868 Fragaria x ananassa HOM05D004806 ORTHO05D005397 1.7e-187 660.2 713 56.2
Atru.chr12.242 Acer truncatum HOM05D004806 ORTHO05D005397 3.9e-187 659.1 664 58.3
Gohir.D10G243800 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.1e-186 657.5 691 57.0
Gohir.D06G170100 Gossypium hirsutum HOM05D004806 ORTHO05D005397 4.3e-186 655.6 669 57.5
Gorai.011G280200 Gossypium raimondii HOM05D004806 ORTHO05D005397 1.2e-185 654.1 691 56.9
Manes.10G017800 Manihot esculenta HOM05D004806 ORTHO05D005397 1.2e-185 654.1 691 57.3
Potri.010G192800 Populus trichocarpa HOM05D004806 ORTHO05D005397 4.7e-185 652.1 681 57.0
COL.COLO4_25659 Corchorus olitorius HOM05D004806 ORTHO05D005397 8.1e-185 651.4 704 56.4
Actinidia33944 Actinidia chinensis HOM05D004806 ORTHO05D005397 5.2e-184 648.7 707 56.3
Gohir.A10G229600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 4.9e-182 642.1 699 55.5
Sed0002029 Sechium edule HOM05D004806 ORTHO05D005397 7.1e-181 638.3 692 55.1
Potri.008G064500 Populus trichocarpa HOM05D004806 ORTHO05D005397 2.3e-179 633.3 670 56.6
Nn2g11386 Nelumbo nucifera HOM05D004806 ORTHO05D005397 1.1e-176 624.4 688 53.6
TAR369G0441 Trochodendron aralioides HOM05D004806 ORTHO05D005397 5.8e-175 618.6 709 53.3
MELO3C008275.2 Cucumis melo HOM05D004806 ORTHO05D005397 7.6e-175 618.2 706 54.1
Nn2g13619 Nelumbo nucifera HOM05D004806 ORTHO05D005397 2.2e-174 616.7 687 54.3
Sabra08G0047400 Salix brachista HOM05D004806 ORTHO05D005397 1.4e-173 614.0 668 56.0
Glyma.14G062000 Glycine max HOM05D004806 ORTHO05D005397 7.9e-172 608.2 706 53.1
Ca_05931_v3 Cicer arietinum L. HOM05D004806 ORTHO05D005397 5.1e-171 605.5 678 54.3
TPR.G8038 Trifolium pratense HOM05D004806 ORTHO05D005397 5.1e-171 605.5 699 53.1
arahy.Tifrunner.gnm1.ann1.76KK00 Arachis hypogaea HOM05D004806 ORTHO05D005397 1.1e-170 604.4 638 56.0
VMungo0647G1582 Vigna mungo HOM05D004806 ORTHO05D005397 2.5e-170 603.2 677 54.5
Eucgr.G03032 Eucalyptus grandis HOM05D004806 ORTHO05D005397 4.8e-169 599.0 696 52.4
Lj1C950G18 Lonicera japonica HOM05D004806 ORTHO05D005397 6.9e-168 595.1 707 51.5
Medtr5g081880 Medicago truncatula HOM05D004806 ORTHO05D005397 1.4e-165 587.4 638 54.2
Phvul.008G226400 Phaseolus vulgaris HOM05D004806 ORTHO05D005397 1.2e-164 584.3 707 52.1
Lalb_Chr04g0250791 Lupinus albus HOM05D004806 ORTHO05D005397 2.1e-164 583.6 724 51.9
DCAR_027553 Daucus carota HOM05D004806 ORTHO05D005397 7.9e-164 581.6 696 51.7
Actinidia29677 Actinidia chinensis HOM05D004806 ORTHO05D005397 1.3e-163 580.9 703 51.1
PGR142G0174 Punica granatum HOM05D004806 ORTHO05D005397 1.9e-162 577.0 688 53.2
Peaxi162Scf00401g00118 Petunia axillaris HOM05D004806 ORTHO05D005397 7.4e-162 575.1 609 55.3
AUR62012206 Chenopodium quinoa HOM05D004806 ORTHO05D005397 2.4e-160 570.1 663 50.2
AUR62022839 Chenopodium quinoa HOM05D004806 ORTHO05D005397 4.0e-160 569.3 664 50.8
vmacro06995 Vaccinium macrocarpon HOM05D004806 ORTHO05D005397 4.0e-160 569.3 653 54.7
Psat2g035600 Pisum sativum HOM05D004806 ORTHO05D005397 1.3e-158 564.3 699 51.5
arahy.Tifrunner.gnm1.ann1.13YYB8 Arachis hypogaea HOM05D004806 ORTHO05D005397 1.1e-157 561.2 596 55.0
Nitab4.5_0000737g0020 Nicotiana tabacum HOM05D004806 ORTHO05D005397 3.2e-157 559.7 619 53.6
Hund13832 Selenicereus undatus HOM05D004806 ORTHO05D005397 1.3e-155 554.3 631 51.5
Hund15980 Selenicereus undatus HOM05D004806 ORTHO05D005397 1.8e-155 553.9 702 49.1
Nitab4.5_0003720g0010 Nicotiana tabacum HOM05D004806 ORTHO05D005397 3.0e-155 553.1 683 50.4
Ah.10g036410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 1.6e-153 547.4 646 51.2
Cc02_g06920 Coffea canephora HOM05D004806 ORTHO05D005397 6.3e-153 545.4 693 51.4
SalBow6G1361 Salvia bowleyana HOM05D004806 ORTHO05D005397 5.3e-152 542.3 695 49.1
SalBow6G1823 Salvia bowleyana HOM05D004806 ORTHO05D005397 2.0e-151 540.4 695 48.9
LjContig00357g0026481 Lotus japonicus HOM05D004806 ORTHO05D005397 2.1e-148 530.4 669 50.1
ClCG11G006350 Citrullus lanatus HOM05D004806 ORTHO05D005397 1.9e-146 523.9 562 55.0
Aqoxy4G02663 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 3.7e-145 519.6 674 48.1
Sc11g0007270 Simmondsia chinensis HOM05D004806 ORTHO05D005397 6.3e-145 518.8 672 49.9
EL10Ac2g04786 Beta vulgaris HOM05D004806 ORTHO05D005397 1.4e-144 517.7 773 43.3
MBI14_g36885_MAGBIO Magnolia biondii HOM05D004806 ORTHO05D005397 3.1e-144 516.5 717 47.6
Ah.16g103100 Amaranthus hybridus HOM05D004806 ORTHO05D005397 4.5e-143 512.7 685 47.4
CsaV3_6G001640 Cucumis sativus L. HOM05D004806 ORTHO05D005397 2.9e-142 510.0 567 54.3
ECA238G2978 Erigeron canadensis HOM05D004806 ORTHO05D005397 4.2e-141 506.1 660 50.0
THA.LOC104824306 Tarenaya hassleriana HOM05D004806 ORTHO05D005397 2.3e-139 500.4 653 51.0
Oeu055830.1 Olea europaea HOM05D004806 ORTHO05D005397 4.4e-138 496.1 700 46.6
PGSC0003DMG400027178 Solanum tuberosum HOM05D004806 ORTHO05D005397 3.7e-137 493.0 587 52.1
Aa31LG5G19660 Aethionema arabicum HOM05D004806 ORTHO05D005397 4.1e-136 489.6 702 47.4
Sopen05g031160 Solanum pennellii HOM05D004806 ORTHO05D005397 1.7e-134 484.2 587 50.9
Nitab4.5_0004338g0050 Nicotiana tabacum HOM05D004806 ORTHO05D005397 2.2e-134 483.8 581 50.4
Solyc05g052630.4 Solanum lycopersicum HOM05D004806 ORTHO05D005397 5.0e-134 482.6 587 50.8
HanXRQChr14g0459971 Helianthus annuus HOM05D004806 ORTHO05D005397 4.7e-132 476.1 686 47.4
Migut.F01427 Erythranthe guttata HOM05D004806 ORTHO05D005397 6.7e-131 472.2 694 45.0
Lsat_1_v5_gn_2_121900 Lactuca sativa HOM05D004806 ORTHO05D005397 1.3e-129 468.0 705 45.8
Nitab4.5_0002100g0120 Nicotiana tabacum HOM05D004806 ORTHO05D005397 4.0e-123 446.4 665 44.8
Carub.0004s2208 Capsella rubella HOM05D004806 ORTHO05D005397 3.1e-120 436.8 680 44.9
PSO801G0450 Papaver somniferum HOM05D004806 ORTHO05D005397 2.9e-118 430.3 717 42.8
unitig_52.g16836 Utricularia gibba HOM05D004806 ORTHO05D005397 2.0e-114 417.5 718 42.6
PSO339G2633 Papaver somniferum HOM05D004806 ORTHO05D005397 1.8e-112 411.0 710 42.4
AL4G37530 Arabidopsis lyrata HOM05D004806 ORTHO05D005397 2.4e-112 410.6 679 43.9
CDE02G2339 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 3.1e-112 410.2 646 41.8
Aqoxy2G00978 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 7.0e-112 409.1 618 46.6
AT2G39950 Arabidopsis thaliana HOM05D004806 ORTHO05D005397 9.1e-112 408.7 677 43.4
Sed0010788 Sechium edule HOM05D004806 ORTHO05D005397 1.6e-111 407.9 508 50.8
Sp4g22260 Schrenkiella parvula HOM05D004806 ORTHO05D005397 7.7e-111 405.6 686 44.0
Thhalv10017559m.g Eutrema salsugineum HOM05D004806 ORTHO05D005397 2.2e-110 404.1 614 46.3
C04p07550 Brassica napus HOM05D004806 ORTHO05D005397 1.7e-102 377.9 666 41.3
BolC4t22372H Brassica oleracea HOM05D004806 ORTHO05D005397 1.7e-102 377.9 666 41.3
Rhsim03G0140100 Rhododendron simsii HOM05D004806 ORTHO05D005397 1.7e-102 377.9 578 45.5
BraA05t19615Z Brassica rapa HOM05D004806 ORTHO05D005397 3.3e-101 373.6 651 42.1
Glyma.02G254400 Glycine max HOM05D004806 ORTHO05D005397 5.6e-101 372.9 482 49.4
HanXRQChr07g0200671 Helianthus annuus HOM05D004806 ORTHO05D005397 2.1e-100 370.9 679 40.6
Manes.07G125400 Manihot esculenta HOM05D004806 ORTHO05D005397 8.0e-100 369.0 409 55.7
HPP92_018194 Vanilla planifolia HOM05D004806 ORTHO05D005397 2.0e-98 364.4 685 39.9
Oeu036630.1 Olea europaea HOM05D004806 ORTHO05D005397 7.5e-98 362.5 542 44.1
HanXRQChr08g0222261 Helianthus annuus HOM05D004806 ORTHO05D005397 1.3e-94 351.7 621 42.0
SGA_v2.0_scaffold343G49443 Striga asiatica HOM05D004806 ORTHO05D005397 5.0e-94 349.7 571 43.1
SGA_v2.0_scaffold76G25081 Striga asiatica HOM05D004806 ORTHO05D005397 1.5e-93 348.2 733 39.4
Zm00001eb297980 Zea mays HOM05D004806 ORTHO05D005397 4.7e-92 343.2 612 39.9
Sc11g0006990 Simmondsia chinensis HOM05D004806 ORTHO05D005397 2.7e-87 327.4 317 57.7
Lsat_1_v5_gn_8_12421 Lactuca sativa HOM05D004806 ORTHO05D005397 1.9e-85 321.2 674 38.0
TAR623G1028 Trochodendron aralioides HOM05D004806 ORTHO05D005397 3.4e-82 310.5 608 41.0
Lalb_Chr17g0346601 Lupinus albus HOM05D004806 ORTHO05D005397 1.1e-77 295.4 528 43.4
GSVIVG01016366001 Vitis vinifera HOM05D004806 ORTHO05D005397 1.4e-75 288.5 189 77.2
CARHR134870 Cardamine hirsuta HOM05D004806 ORTHO05D005397 4.6e-71 273.5 509 40.1
ATR0618G022 Amborella trichopoda HOM05D004806 ORTHO05D005397 7.3e-69 266.2 260 56.9
CDE09G0712 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 3.0e-62 244.2 202 57.9
AagrBONN_evm.TU.Sc2ySwM_368.289 Anthoceros agrestis HOM05D004806 ORTHO05D005397 9.6e-53 212.6 240 45.4
Mapoly0096s0071 Marchantia polymorpha HOM05D004806 ORTHO05D005397 2.6e-50 204.5 254 44.1
RcHm_v2.0_Chr1g0369361 Rosa chinensis HOM05D004806 ORTHO05D005397 3.2e-48 197.6 220 55.0
MD07G1214200 Malus domestica HOM05D004806 ORTHO05D005397 1.3e-46 192.2 173 63.6
Sabra10G0148400 Salix brachista HOM05D004806 ORTHO05D005397 5.1e-46 190.3 177 61.6
SHI03525 Sapria himalayana HOM05D004806 ORTHO05D005397 1.4e-40 172.2 442 32.8
TPR.G40368 Trifolium pratense HOM05D004806 ORTHO05D005397 9.3e-40 169.5 136 67.6
CBR_g37391 Chara braunii HOM05D004806 ORTHO05D005397 4.6e-39 167.2 202 42.6
Lalb_Chr17g0346611 Lupinus albus HOM05D004806 ORTHO05D005397 4.6e-39 167.2 121 66.1
Oeu059753.1 Olea europaea HOM05D004806 ORTHO05D005397 1.6e-36 158.7 152 54.6
SMO358G0301 Selaginella moellendorffii HOM05D004806 ORTHO05D005397 1.8e-35 155.2 395 32.7
CDE09G1248 Ceratophyllum demersum HOM05D000530 ORTHO05D003341 9.0e-35 152.9 275 41.8
BcaB02g09066 Brassica carinata HOM05D004806 ORTHO05D005397 4.5e-34 150.6 230 41.3
A05p06470 Brassica napus HOM05D004806 ORTHO05D005397 1.9e-32 145.2 133 61.7
Oeu022381.1 Olea europaea HOM05D004806 ORTHO05D005397 1.1e-29 136.0 133 55.6
Haze_17183 Corylus avellana HOM05D004806 ORTHO05D005397 1.5e-29 135.6 145 55.9
SHI03526 Sapria himalayana HOM05D004806 ORTHO05D005397 4.1e-27 127.5 152 48.0
AagrBONN_evm.TU.Sc2ySwM_369.624 Anthoceros agrestis HOM05D004806 ORTHO05D005397 1.1e-19 102.8 174 35.1
Os07g0100500 Oryza sativa ssp. japonica HOM05D004806 ORTHO05D005397 1.8e-19 102.1 74 62.2
ATR0618G087 Amborella trichopoda HOM05D004806 ORTHO05D005397 2.6e-18 98.2 184 40.2
ATR0723G011 Amborella trichopoda HOM05D004806 ORTHO05D005397 5.5e-16 90.5 72 62.5
SalBow6G4818 Salvia bowleyana HOM05D004806 ORTHO05D005397 9.4e-16 89.7 115 50.4
Zm00001eb057510 Zea mays HOM05D004806 ORTHO05D005397 8.8e-14 83.2 73 56.2
RcHm_v2.0_Chr1g0313541 Rosa chinensis HOM05D004806 ORTHO05D005397 2.2e-12 78.6 62 67.7
Oeu043075.1 Olea europaea HOM05D004806 ORTHO05D005397 1.4e-11 75.9 50 72.0
CAN.G853.43 Capsicum annuum HOM05D004806 ORTHO05D005397 4.5e-10 70.9 48 68.8
Pp3c26_8620 Physcomitrium patens HOM05D004806 ORTHO05D005397 5.9e-10 70.5 111 35.1
QL12p022365 Quercus lobata HOM05D005179 ORTHO05D006225 5.9e-10 70.5 79 53.2
Oeu059752.1 Olea europaea HOM05D004806 ORTHO05D005397 3.8e-09 67.8 97 42.3
Ah.05g175410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 1.9e-08 65.5 55 58.2
Oeu021121.1 Olea europaea HOM05D004806 ORTHO05D005397 2.3e-06 58.5 42 61.9
SalBow2G3552 Salvia bowleyana HOM05D034888 ORTHO05D005397 5.2e-06 57.4 51 58.8


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