Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G182400 Carya illinoinensis HOM05D004065 ORTHO05D004806 1.5e-124 449.5 231 100.0
Cfa001505 Carpinus fangiana HOM05D004065 ORTHO05D004806 3.9e-104 381.7 232 86.2
RcHm_v2.0_Chr1g0366301 Rosa chinensis HOM05D004065 ORTHO05D004806 3.2e-98 362.1 255 76.1
Prupe.2G231600 Prunus persica HOM05D004065 ORTHO05D004806 3.6e-97 358.6 256 75.4
FAN03G1397 Fragaria x ananassa HOM05D004065 ORTHO05D004806 3.0e-96 355.5 255 74.9
FAN10G0299 Fragaria x ananassa HOM05D004065 ORTHO05D004806 3.0e-96 355.5 255 74.9
MD07G1194200 Malus domestica HOM05D004065 ORTHO05D004806 3.0e-96 355.5 256 75.0
QL08p059042 Quercus lobata HOM05D004065 ORTHO05D004806 3.0e-96 355.5 230 82.2
FAN01G1867 Fragaria x ananassa HOM05D004065 ORTHO05D004806 7.5e-95 350.9 255 74.1
Thecc.10G046900 Theobroma cacao HOM05D004065 ORTHO05D004806 9.7e-95 350.5 257 73.2
CANSAT56G4002 Cannabis sativa HOM05D004065 ORTHO05D004806 1.3e-94 350.1 260 71.9
FvH4_7g21970 Fragaria vesca HOM05D004065 ORTHO05D004806 2.2e-94 349.4 255 73.7
FAN06G3757 Fragaria x ananassa HOM05D004065 ORTHO05D004806 2.2e-94 349.4 255 73.7
Duzib114G0580 Durio zibethinus HOM05D004065 ORTHO05D004806 4.8e-94 348.2 257 73.2
TWI15G0503 Tripterygium wilfordii HOM05D004065 ORTHO05D004806 8.2e-94 347.4 262 71.8
Gorai.011G255800 Gossypium raimondii HOM05D004065 ORTHO05D004806 1.4e-93 346.7 257 72.8
FAN06G3343 Fragaria x ananassa HOM05D004065 ORTHO05D004806 2.4e-93 345.9 255 73.3
Gohir.A10G215800 Gossypium hirsutum HOM05D004065 ORTHO05D004806 4.1e-93 345.1 257 72.4
Gohir.D10G224800 Gossypium hirsutum HOM05D004065 ORTHO05D004806 4.1e-93 345.1 257 72.4
TWI38G1478 Tripterygium wilfordii HOM05D004065 ORTHO05D004806 5.3e-93 344.7 262 72.1
Manes.10G033000 Manihot esculenta HOM05D004065 ORTHO05D004806 7.7e-92 340.9 256 70.7
Atru.chr12.508 Acer truncatum HOM05D004065 ORTHO05D004806 1.3e-91 340.1 287 66.2
Dinv31435 Davidia involucrata HOM05D004065 ORTHO05D004806 2.2e-91 339.3 255 72.9
Ca_07234_v3 Cicer arietinum L. HOM05D004065 ORTHO05D004806 2.9e-91 339.0 262 70.6
Dinv25990 Davidia involucrata HOM05D004065 ORTHO05D004806 2.9e-91 339.0 255 71.4
CSS0036524 Camellia sinensis var. sinensis HOM05D004065 ORTHO05D004806 3.8e-91 338.6 255 71.8
Medtr7g024190 Medicago truncatula HOM05D004065 ORTHO05D004806 5.0e-91 338.2 262 70.2
Potri.010G207900 Populus trichocarpa HOM05D004065 ORTHO05D004806 5.0e-91 338.2 259 70.7
Glyma.02G093600 Glycine max HOM05D004065 ORTHO05D004806 6.5e-91 337.8 261 69.7
PGR142G1305 Punica granatum HOM05D004065 ORTHO05D004806 6.5e-91 337.8 258 70.9
Ciclev10030542m.g Citrus clementina HOM05D004065 ORTHO05D004806 8.5e-91 337.4 258 70.9
FAN06G3693 Fragaria x ananassa HOM05D004065 ORTHO05D004806 8.5e-91 337.4 258 72.1
Duzib106G1820 Durio zibethinus HOM05D004065 ORTHO05D004806 1.1e-90 337.0 257 70.8
MD01G1124000 Malus domestica HOM05D004065 ORTHO05D004806 1.5e-90 336.7 270 68.5
Hma1.2p1_0727F.1_g209200 Hydrangea macrophylla HOM05D004065 ORTHO05D004806 1.9e-90 336.3 253 72.7
Nn2g10418 Nelumbo nucifera HOM05D004065 ORTHO05D004806 1.9e-90 336.3 262 69.8
Potri.008G052700 Populus trichocarpa HOM05D004065 ORTHO05D004806 1.9e-90 336.3 258 70.5
Phvul.008G013500 Phaseolus vulgaris HOM05D004065 ORTHO05D004806 2.5e-90 335.9 262 71.4
Eucgr.G02920 Eucalyptus grandis HOM05D004065 ORTHO05D004806 9.4e-90 334.0 254 70.5
Lj1g0007112 Lotus japonicus HOM05D004065 ORTHO05D004806 1.2e-89 333.6 262 69.1
TAR633G2080 Trochodendron aralioides HOM05D004065 ORTHO05D004806 1.2e-89 333.6 263 70.3
Psat3g180760 Pisum sativum HOM05D004065 ORTHO05D004806 4.7e-89 331.6 262 69.5
Rhsim09G0164300 Rhododendron simsii HOM05D004065 ORTHO05D004806 6.1e-89 331.3 253 70.8
TPR.G15495 Trifolium pratense HOM05D004065 ORTHO05D004806 6.1e-89 331.3 262 70.2
GSVIVG01016585001 Vitis vinifera HOM05D004065 ORTHO05D004806 1.8e-88 329.7 245 74.7
Cpa.g.sc1437.1 Carica papaya HOM05D004065 ORTHO05D004806 5.2e-88 328.2 239 74.9
Cc02_g08160 Coffea canephora HOM05D004065 ORTHO05D004806 6.8e-88 327.8 252 70.6
Gorai.012G069700 Gossypium raimondii HOM05D004065 ORTHO05D004806 6.8e-88 327.8 256 69.5
Gohir.D04G062400 Gossypium hirsutum HOM05D004065 ORTHO05D004806 8.8e-88 327.4 256 69.5
THA.LOC104799352 Tarenaya hassleriana HOM05D004065 ORTHO05D004806 1.5e-87 326.6 240 75.4
AL3G24260 Arabidopsis lyrata HOM05D004065 ORTHO05D004806 4.4e-87 325.1 240 75.0
BcaC01g04018 Brassica carinata HOM05D004065 ORTHO05D004806 7.5e-87 324.3 242 73.1
Sed0019555 Sechium edule HOM05D004065 ORTHO05D004806 9.8e-87 323.9 246 68.7
AT3G12590 Arabidopsis thaliana HOM05D004065 ORTHO05D004806 2.2e-86 322.8 242 73.1
CsaV3_5G008100 Cucumis sativus L. HOM05D004065 ORTHO05D004806 2.8e-86 322.4 261 67.0
Thhalv10019927m.g Eutrema salsugineum HOM05D004065 ORTHO05D004806 4.8e-86 321.6 243 72.0
Sp3g10730 Schrenkiella parvula HOM05D004065 ORTHO05D004806 6.3e-86 321.2 242 73.6
CARHR087100 Cardamine hirsuta HOM05D004065 ORTHO05D004806 8.3e-86 320.9 242 71.5
Carub.0003s1194 Capsella rubella HOM05D004065 ORTHO05D004806 1.1e-85 320.5 242 74.0
Lalb_Chr04g0257821 Lupinus albus HOM05D004065 ORTHO05D004806 1.4e-85 320.1 263 67.3
BcaB04g21060 Brassica carinata HOM05D004065 ORTHO05D004806 3.1e-85 318.9 242 72.3
Sopen06g010560 Solanum pennellii HOM05D004065 ORTHO05D004806 4.1e-85 318.5 252 68.7
LjContig00357g0027530 Lotus japonicus HOM05D004065 ORTHO05D004806 7.0e-85 317.8 271 66.4
Psat6g236120 Pisum sativum HOM05D004065 ORTHO05D004806 9.1e-85 317.4 271 64.9
Sabra10G0160500 Salix brachista HOM05D004065 ORTHO05D004806 1.2e-84 317.0 225 74.2
Solyc06g042950.3 Solanum lycopersicum HOM05D004065 ORTHO05D004806 3.5e-84 315.5 252 68.3
CiPaw.01G284400 Carya illinoinensis HOM05D004065 ORTHO05D004806 4.5e-84 315.1 231 75.3
PSO339G3310 Papaver somniferum HOM05D004065 ORTHO05D004806 5.9e-84 314.7 262 67.6
Aqoxy2G02042 Aquilegia oxysepala HOM05D004065 ORTHO05D004806 1.3e-83 313.5 263 66.9
SalBow6G0580 Salvia bowleyana HOM05D004065 ORTHO05D004806 2.3e-83 312.8 280 62.9
MSTRG.8235 Avicennia marina HOM05D004065 ORTHO05D004806 1.5e-82 310.1 248 67.3
Haze_17038 Corylus avellana HOM05D004065 ORTHO05D004806 2.5e-82 309.3 211 78.2
Aa31LG3G60 Aethionema arabicum HOM05D004065 ORTHO05D004806 5.5e-82 308.1 267 65.5
Glyma.18G288500 Glycine max HOM05D004065 ORTHO05D004806 5.5e-82 308.1 259 65.3
AUR62038371 Chenopodium quinoa HOM05D004065 ORTHO05D004806 4.7e-81 305.1 262 65.3
Lsat_1_v5_gn_2_117761 Lactuca sativa HOM05D004065 ORTHO05D004806 1.0e-80 303.9 258 66.3
BolC1t05197H Brassica oleracea HOM05D004065 ORTHO05D004806 1.8e-80 303.1 270 64.8
BraA03t12924Z Brassica rapa HOM05D004065 ORTHO05D004806 6.8e-80 301.2 246 68.3
HanXRQChr07g0201231 Helianthus annuus HOM05D004065 ORTHO05D004806 6.8e-80 301.2 255 65.9
DCAR_019167 Daucus carota HOM05D004065 ORTHO05D004806 1.2e-79 300.4 237 68.8
HPP92_003382 Vanilla planifolia HOM05D004065 ORTHO05D004806 1.2e-79 300.4 253 65.2
Glyma.10G289700 Glycine max HOM05D004065 ORTHO05D004806 2.6e-79 299.3 272 62.5
Lj8C86G13 Lonicera japonica HOM05D004065 ORTHO05D004806 3.4e-79 298.9 281 60.5
C01p52580 Brassica napus HOM05D004065 ORTHO05D004806 4.4e-79 298.5 284 61.6
BNapus_Darmor_BZH_scaffold_149p00120 Brassica napus HOM05D004065 ORTHO05D004806 9.8e-79 297.4 284 61.3
BraA01t04124Z Brassica rapa HOM05D004065 ORTHO05D004806 9.8e-79 297.4 284 61.3
arahy.Tifrunner.gnm1.ann1.P8VZLW Arachis hypogaea HOM05D004065 ORTHO05D004806 1.3e-78 297.0 263 65.4
arahy.Tifrunner.gnm1.ann1.XU51RJ Arachis hypogaea HOM05D004065 ORTHO05D004806 1.3e-78 297.0 263 65.4
ECA238G1619 Erigeron canadensis HOM05D004065 ORTHO05D004806 2.2e-78 296.2 254 64.6
Glyma.20G099500 Glycine max HOM05D004065 ORTHO05D004806 3.7e-78 295.4 272 62.5
Zm00001eb139750 Zea mays HOM05D004065 ORTHO05D004806 1.4e-77 293.5 262 63.4
MELO3C023859.2 Cucumis melo HOM05D004065 ORTHO05D004806 2.4e-77 292.7 257 63.4
EL10Ac2g03418 Beta vulgaris HOM05D004065 ORTHO05D004806 7.8e-76 287.7 253 64.4
SEGI_35631 Sequoiadendron giganteum HOM05D004065 ORTHO05D004806 1.3e-75 287.0 263 58.9
C03p45740 Brassica napus HOM05D000062 ORTHO05D004806 1.1e-74 283.9 232 69.0
ClCG07G003370 Citrullus lanatus HOM05D004065 ORTHO05D004806 4.3e-74 282.0 281 57.7
Migut.F01518 Erythranthe guttata HOM05D004065 ORTHO05D004806 7.3e-74 281.2 230 66.5
A03p37690 Brassica napus HOM05D000062 ORTHO05D004806 2.1e-73 279.6 232 67.2
SGA_v2.0_scaffold2G00996 Striga asiatica HOM05D004065 ORTHO05D004806 3.0e-72 275.8 255 62.7
DCAR_015196 Daucus carota HOM05D004065 ORTHO05D004806 1.3e-70 270.4 233 64.8
unitig_26.g10019 Utricularia gibba HOM05D004065 ORTHO05D004806 1.1e-69 267.3 220 65.9
BcaB04g21068 Brassica carinata HOM05D004065 ORTHO05D004806 7.3e-66 254.6 217 68.7
FAN01G2126 Fragaria x ananassa HOM05D004065 ORTHO05D004806 1.2e-65 253.8 235 63.8
Gohir.A05G350100 Gossypium hirsutum HOM05D004065 ORTHO05D004806 1.2e-63 247.3 227 61.7
Oeu016023.5 Olea europaea HOM05D004065 ORTHO05D004806 2.2e-62 243.0 249 56.2
BcaB04g21053 Brassica carinata HOM05D004065 ORTHO05D004806 1.1e-61 240.7 220 63.2
Mapoly0126s0012 Marchantia polymorpha HOM05D004065 ORTHO05D004806 1.9e-61 240.0 255 51.0
ATR0559G344 Amborella trichopoda HOM05D004065 ORTHO05D004806 2.4e-61 239.6 227 58.6
Pp3c24_6470 Physcomitrium patens HOM05D004065 ORTHO05D004806 2.1e-60 236.5 263 47.9
Peaxi162Scf00658g00731 Petunia axillaris HOM05D004065 ORTHO05D004806 1.7e-59 233.4 230 60.0
FvH4_7g22002 Fragaria vesca HOM05D004065 ORTHO05D004806 2.1e-57 226.5 130 86.9
AagrBONN_evm.TU.Sc2ySwM_344.343 Anthoceros agrestis HOM05D004065 ORTHO05D004806 6.8e-56 221.5 249 50.6
CDE04G2206 Ceratophyllum demersum HOM05D004065 ORTHO05D004806 8.9e-56 221.1 191 62.3
COL.COLO4_14967 Corchorus olitorius HOM05D004065 ORTHO05D004806 2.0e-55 219.9 178 70.2
SHI22587 Sapria himalayana HOM05D004065 ORTHO05D004806 5.8e-55 218.4 233 52.4
Nitab4.5_0005137g0020 Nicotiana tabacum HOM05D004065 ORTHO05D004806 7.5e-55 218.0 197 63.5
Hund20020 Selenicereus undatus HOM05D004065 ORTHO05D004806 2.9e-54 216.1 183 65.0
Nitab4.5_0001836g0030 Nicotiana tabacum HOM05D004065 ORTHO05D004806 3.2e-53 212.6 238 55.0
AUR62040961 Chenopodium quinoa HOM05D004065 ORTHO05D004806 2.7e-52 209.5 182 63.7
Lalb_Chr06g0164301 Lupinus albus HOM05D004065 ORTHO05D004806 1.0e-51 207.6 199 60.3
Oeu012240.1 Olea europaea HOM05D004065 ORTHO05D004806 3.0e-43 179.5 165 61.2
SMO146G0347 Selaginella moellendorffii HOM05D004065 ORTHO05D004806 2.5e-42 176.4 182 50.0
CBR_g54636 Chara braunii HOM05D004065 ORTHO05D004806 5.8e-39 165.2 285 35.4
Actinidia29212 Actinidia chinensis HOM05D004065 ORTHO05D004806 2.5e-34 149.8 161 58.4
arahy.Tifrunner.gnm1.ann1.JMTW06 Arachis hypogaea HOM05D004065 ORTHO05D004806 5.1e-19 99.0 131 48.1
AagrBONN_evm.TU.Sc2ySwM_344.350 Anthoceros agrestis HOM05D004065 ORTHO05D004806 4.3e-18 95.9 64 68.8
FAN01G2840 Fragaria x ananassa HOM05D004065 ORTHO05D004806 1.7e-14 84.0 48 85.4
Cre17.g707100 Chlamydomonas reinhardtii HOM05D004065 ORTHO05D004806 1.3e-11 74.3 121 36.4
Zm00001eb362160 Zea mays HOM05D008199 ORTHO05D010334 3.4e-07 59.7 40 70.0


User provided reference genes

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